Definition | Rhodopseudomonas palustris HaA2, complete genome. |
---|---|
Accession | NC_007778 |
Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is melC2 [H]
Identifier: 86749288
GI number: 86749288
Start: 2458560
End: 2459810
Strand: Reverse
Name: melC2 [H]
Synonym: RPB_2167
Alternate gene names: 86749288
Gene position: 2459810-2458560 (Counterclockwise)
Preceding gene: 86749289
Following gene: 86749287
Centisome position: 46.14
GC content: 67.39
Gene sequence:
>1251_bases ATGCAGGTCCAAATCGATATTCCCGGTGAAGATGCCCAAGGTCGCGTGTTTCTCGGCTGGACGCCCGTTCAGGCCAGCGC CCGGTTGTTGCAGGGTCCAGGTGCCGGCTCCGTCGACGTCGAGATCAGCAGCGCCGGCGCGGTCGGCGGGCTGGTGTTCG ATACGGCGCGAACGCACAACGGCGGCTCGCGCCTGACGCTCGGCCTGCCGGGTGACGGCCGGCCGGTGACGTTCTTCGTC GCGGGCGAATTCCTCAAGCCGAGTTCGCGTTACGGCGACGCCGCCATCGCCGTGAAGGACAAGGCCAGCGGCGCCCCGCT CGCCAGCAAGCCGGTGATGGTGCGCATCCGCAAAAATGCGGTCACGTTGAGCCAGGAGGAGCGCGACGACTTCCTCGCCG CGCTCGGCACCCTGAATGCGCGCGGCCAGGGTCCCTATCGTATCGTTCGCGATATGCACGACGCCGATTCGGATCTCGAA ATCCATCGCAACGAAGGCTTCCTGCCGTGGCACCGCGCCTACGTGCTCGGGCTCGAGCGCGCGCTCCAGGCGATCAACCC GGTGGTGACGCTGCCCTATTGGCAGTTCGACGCGCCCGCGCCTGTGCTCTTCACCATCGACTACATGGGACGATCCGACG AATCCGGCCACGTCGTTTTCCGGCCCGGGCACTCGCTCGAGCACTGGGTGGCGAAGGATACGCCCGGGATCGTCCGCGTG CCGCGATTTGCGTCCGACGCTCCGGCGCTGGTCATCAGCGAAGACGATACGATCAGGCTCGGCGGGGCGACAGCCGATTT CGCCCTGTTTCGGCAAATGGAGGGCGGGCCGCACGGTCAGGCGCACAACAGCTTTGCCGCCCCCAGCCCGCTCAGGTACC CCGCCCTCGCCGTCTATGATCCTTTGTTCTTCCTGCTCCACTGCAATGTCGACCGGCTGTGGACGAAATGGCAGTGGATC AAGCACCGCACGGACAGCTCCGACCGGCTCGCCTACAGCGACGGCACGCGCGCCGGCACCAAGCGCGGCGACACGATGTG GCCGTGGAATGGCATCCACGGCAATCCGCGGCCGCCGACTGCACCGGGCGGACCGTTTCCTCCGACCAGTACCACGCCGG CGCCGGGCCGCACGCCAAGGGTCAGCGACATGCTCGATGCGATGGCGCTCAAGGCGCCCGATCCGCTCGGCTTCGCCTAC GACGACGTGCCGTTCCAGCTGCCGCCGACCGTGGTTGCAGGTCATGCCTAG
Upstream 100 bases:
>100_bases TTGCTGCGCTTATGTGTGCGTCGCGGAAAATCCGCGACCTGTTACCTTGTTCGATTGCCTCGCGATTATTTTCAGCCGCT TGCGCGTGGAGAACCGCGAC
Downstream 100 bases:
>100_bases CCTGACTACGTGAACCGAAGACGGCCGAGCCGAAGCGCCTCGAACGCGGAGCCATTGCGATGGACGTCGAACAATATCGA AGGGACTACGAAGCCCGATT
Product: tyrosinase
Products: NA
Alternate protein names: Monophenol monooxygenase [H]
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MQVQIDIPGEDAQGRVFLGWTPVQASARLLQGPGAGSVDVEISSAGAVGGLVFDTARTHNGGSRLTLGLPGDGRPVTFFV AGEFLKPSSRYGDAAIAVKDKASGAPLASKPVMVRIRKNAVTLSQEERDDFLAALGTLNARGQGPYRIVRDMHDADSDLE IHRNEGFLPWHRAYVLGLERALQAINPVVTLPYWQFDAPAPVLFTIDYMGRSDESGHVVFRPGHSLEHWVAKDTPGIVRV PRFASDAPALVISEDDTIRLGGATADFALFRQMEGGPHGQAHNSFAAPSPLRYPALAVYDPLFFLLHCNVDRLWTKWQWI KHRTDSSDRLAYSDGTRAGTKRGDTMWPWNGIHGNPRPPTAPGGPFPPTSTTPAPGRTPRVSDMLDAMALKAPDPLGFAY DDVPFQLPPTVVAGHA
Sequences:
>Translated_416_residues MQVQIDIPGEDAQGRVFLGWTPVQASARLLQGPGAGSVDVEISSAGAVGGLVFDTARTHNGGSRLTLGLPGDGRPVTFFV AGEFLKPSSRYGDAAIAVKDKASGAPLASKPVMVRIRKNAVTLSQEERDDFLAALGTLNARGQGPYRIVRDMHDADSDLE IHRNEGFLPWHRAYVLGLERALQAINPVVTLPYWQFDAPAPVLFTIDYMGRSDESGHVVFRPGHSLEHWVAKDTPGIVRV PRFASDAPALVISEDDTIRLGGATADFALFRQMEGGPHGQAHNSFAAPSPLRYPALAVYDPLFFLLHCNVDRLWTKWQWI KHRTDSSDRLAYSDGTRAGTKRGDTMWPWNGIHGNPRPPTAPGGPFPPTSTTPAPGRTPRVSDMLDAMALKAPDPLGFAY DDVPFQLPPTVVAGHA >Mature_416_residues MQVQIDIPGEDAQGRVFLGWTPVQASARLLQGPGAGSVDVEISSAGAVGGLVFDTARTHNGGSRLTLGLPGDGRPVTFFV AGEFLKPSSRYGDAAIAVKDKASGAPLASKPVMVRIRKNAVTLSQEERDDFLAALGTLNARGQGPYRIVRDMHDADSDLE IHRNEGFLPWHRAYVLGLERALQAINPVVTLPYWQFDAPAPVLFTIDYMGRSDESGHVVFRPGHSLEHWVAKDTPGIVRV PRFASDAPALVISEDDTIRLGGATADFALFRQMEGGPHGQAHNSFAAPSPLRYPALAVYDPLFFLLHCNVDRLWTKWQWI KHRTDSSDRLAYSDGTRAGTKRGDTMWPWNGIHGNPRPPTAPGGPFPPTSTTPAPGRTPRVSDMLDAMALKAPDPLGFAY DDVPFQLPPTVVAGHA
Specific function: This is a copper-containing oxidase that functions in the formation of pigments such as melanins and other polyphenolic compounds [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tyrosinase family [H]
Homologues:
Organism=Caenorhabditis elegans, GI17551924, Length=249, Percent_Identity=26.1044176706827, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193202602, Length=250, Percent_Identity=26.8, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008922 - InterPro: IPR002227 [H]
Pfam domain/function: PF00264 Tyrosinase [H]
EC number: =1.14.18.1 [H]
Molecular weight: Translated: 45030; Mature: 45030
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS00497 TYROSINASE_1 ; PS00498 TYROSINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVQIDIPGEDAQGRVFLGWTPVQASARLLQGPGAGSVDVEISSAGAVGGLVFDTARTHN CEEEEECCCCCCCCEEEEEECCHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEECCCCCC GGSRLTLGLPGDGRPVTFFVAGEFLKPSSRYGDAAIAVKDKASGAPLASKPVMVRIRKNA CCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCE VTLSQEERDDFLAALGTLNARGQGPYRIVRDMHDADSDLEIHRNEGFLPWHRAYVLGLER EEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHH ALQAINPVVTLPYWQFDAPAPVLFTIDYMGRSDESGHVVFRPGHSLEHWVAKDTPGIVRV HHHHCCCEEECCEEECCCCCCEEEEEEECCCCCCCCEEEECCCCCHHHHHHCCCCCEEEC PRFASDAPALVISEDDTIRLGGATADFALFRQMEGGPHGQAHNSFAAPSPLRYPALAVYD CCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH PLFFLLHCNVDRLWTKWQWIKHRTDSSDRLAYSDGTRAGTKRGDTMWPWNGIHGNPRPPT HEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC APGGPFPPTSTTPAPGRTPRVSDMLDAMALKAPDPLGFAYDDVPFQLPPTVVAGHA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCC >Mature Secondary Structure MQVQIDIPGEDAQGRVFLGWTPVQASARLLQGPGAGSVDVEISSAGAVGGLVFDTARTHN CEEEEECCCCCCCCEEEEEECCHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEECCCCCC GGSRLTLGLPGDGRPVTFFVAGEFLKPSSRYGDAAIAVKDKASGAPLASKPVMVRIRKNA CCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCE VTLSQEERDDFLAALGTLNARGQGPYRIVRDMHDADSDLEIHRNEGFLPWHRAYVLGLER EEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHH ALQAINPVVTLPYWQFDAPAPVLFTIDYMGRSDESGHVVFRPGHSLEHWVAKDTPGIVRV HHHHCCCEEECCEEECCCCCCEEEEEEECCCCCCCCEEEECCCCCHHHHHHCCCCCEEEC PRFASDAPALVISEDDTIRLGGATADFALFRQMEGGPHGQAHNSFAAPSPLRYPALAVYD CCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH PLFFLLHCNVDRLWTKWQWIKHRTDSSDRLAYSDGTRAGTKRGDTMWPWNGIHGNPRPPT HEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC APGGPFPPTSTTPAPGRTPRVSDMLDAMALKAPDPLGFAYDDVPFQLPPTVVAGHA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3932128 [H]