| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86749250
Identifier: 86749250
GI number: 86749250
Start: 2421946
End: 2422815
Strand: Reverse
Name: 86749250
Synonym: RPB_2129
Alternate gene names: NA
Gene position: 2422815-2421946 (Counterclockwise)
Preceding gene: 86749252
Following gene: 86749249
Centisome position: 45.44
GC content: 67.01
Gene sequence:
>870_bases ATGCCGGATTTCAAGACGTGGTTGCGGGCGCCGTTCGTATGGCGCGCCCGGGCGCTCGATCGTGCCGTCGCCGGGCGCGA CGTGCCGACGCTGGCGGTGGTCGCGATCTTTCGCGAGGAAGCGCCGTTCCTCGACGAGTGGTTGCGGTTTCACGAGGGCG TCGGTGTCGGCCACTTCTATCTCTACAACAATTTCAGCACCGACGATTTCCGCGAGGTGCTGGCGCCGTGGATCGCGCGC GGGCTGGTGACGCTGACGGACTGGCCGGTCGAGGTCGGGCAATTGCCGGCGTATCGCCATTGCATCAGGCGGCACCGGCT GGATGCGAAGTGGATGGCGTTCATCGACATCGACGAGTTTCTGTTCTCGCCCGCCGCCGACAAGGTCACCGACGTGCTCG GCCGGTTCGCGGGCGCGCCGGCGGTCGGCGTGTTCTCGCCCTATTTCGGCTCGGCCGGGCACGAGCAGCGCCCGCCGGTG CCGATCACCCGCGCCTTCACCCGGCGATCGCCGCTGTCGAAAATCTCCGCCAAGACCATCGCCAATCCGCGCTGGATCCG CGCCATCCGCAACGTGCATCTCTACAAATACTGGCACGGCGAAACCATCGATACGCAGGGCCGCCCGTTCGACGGCGACC GCCCGGTGCTCGACCTGTTGCGCCTCAACCATTACTGGTCGCGCTCGCTGTCCGACCTGCAAACCAAGATCCAGCGCGGC GACGCCTCGACGCCGGTGCCGCGCGACAGCGACTGGCATTTCGCCGCGGAGAAAGACATGAATGCGGAGGAAGACACCTC GATCCTGCCGGTGCTGGAGAAGGTGTTCGGGACGGCGGAGCGCTCGGCGGCGACTCCGGCCGCACGATGA
Upstream 100 bases:
>100_bases AGCGCACGCGACTTGGCAAGATCGGCGATCTGAAACACGCGCCGAACGGCCCTCGGACTCGCGTTGCCGATATCGATGGG CCGGCCCGTGGGGGACGCCA
Downstream 100 bases:
>100_bases GTTGCACCCGGCGAAAGGCATCGCATGTCCGACCTGATCCGGCGCGCCACCGACGATGACGTGGCGGCGATCACCGATCT CACCATGCGCGCCTATGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MPDFKTWLRAPFVWRARALDRAVAGRDVPTLAVVAIFREEAPFLDEWLRFHEGVGVGHFYLYNNFSTDDFREVLAPWIAR GLVTLTDWPVEVGQLPAYRHCIRRHRLDAKWMAFIDIDEFLFSPAADKVTDVLGRFAGAPAVGVFSPYFGSAGHEQRPPV PITRAFTRRSPLSKISAKTIANPRWIRAIRNVHLYKYWHGETIDTQGRPFDGDRPVLDLLRLNHYWSRSLSDLQTKIQRG DASTPVPRDSDWHFAAEKDMNAEEDTSILPVLEKVFGTAERSAATPAAR
Sequences:
>Translated_289_residues MPDFKTWLRAPFVWRARALDRAVAGRDVPTLAVVAIFREEAPFLDEWLRFHEGVGVGHFYLYNNFSTDDFREVLAPWIAR GLVTLTDWPVEVGQLPAYRHCIRRHRLDAKWMAFIDIDEFLFSPAADKVTDVLGRFAGAPAVGVFSPYFGSAGHEQRPPV PITRAFTRRSPLSKISAKTIANPRWIRAIRNVHLYKYWHGETIDTQGRPFDGDRPVLDLLRLNHYWSRSLSDLQTKIQRG DASTPVPRDSDWHFAAEKDMNAEEDTSILPVLEKVFGTAERSAATPAAR >Mature_288_residues PDFKTWLRAPFVWRARALDRAVAGRDVPTLAVVAIFREEAPFLDEWLRFHEGVGVGHFYLYNNFSTDDFREVLAPWIARG LVTLTDWPVEVGQLPAYRHCIRRHRLDAKWMAFIDIDEFLFSPAADKVTDVLGRFAGAPAVGVFSPYFGSAGHEQRPPVP ITRAFTRRSPLSKISAKTIANPRWIRAIRNVHLYKYWHGETIDTQGRPFDGDRPVLDLLRLNHYWSRSLSDLQTKIQRGD ASTPVPRDSDWHFAAEKDMNAEEDTSILPVLEKVFGTAERSAATPAAR
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32970; Mature: 32839
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDFKTWLRAPFVWRARALDRAVAGRDVPTLAVVAIFREEAPFLDEWLRFHEGVGVGHFY CCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEE LYNNFSTDDFREVLAPWIARGLVTLTDWPVEVGQLPAYRHCIRRHRLDAKWMAFIDIDEF EECCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHCCCCHHEEEEEHHHH LFSPAADKVTDVLGRFAGAPAVGVFSPYFGSAGHEQRPPVPITRAFTRRSPLSKISAKTI HHCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHC ANPRWIRAIRNVHLYKYWHGETIDTQGRPFDGDRPVLDLLRLNHYWSRSLSDLQTKIQRG CCHHHHHHHHHCEEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC DASTPVPRDSDWHFAAEKDMNAEEDTSILPVLEKVFGTAERSAATPAAR CCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCC >Mature Secondary Structure PDFKTWLRAPFVWRARALDRAVAGRDVPTLAVVAIFREEAPFLDEWLRFHEGVGVGHFY CCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEE LYNNFSTDDFREVLAPWIARGLVTLTDWPVEVGQLPAYRHCIRRHRLDAKWMAFIDIDEF EECCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHCCCCHHEEEEEHHHH LFSPAADKVTDVLGRFAGAPAVGVFSPYFGSAGHEQRPPVPITRAFTRRSPLSKISAKTI HHCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHC ANPRWIRAIRNVHLYKYWHGETIDTQGRPFDGDRPVLDLLRLNHYWSRSLSDLQTKIQRG CCHHHHHHHHHCEEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC DASTPVPRDSDWHFAAEKDMNAEEDTSILPVLEKVFGTAERSAATPAAR CCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA