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The map label for this gene is 86749230

Identifier: 86749230

GI number: 86749230

Start: 2398540

End: 2400609

Strand: Reverse

Name: 86749230

Synonym: RPB_2109

Alternate gene names: NA

Gene position: 2400609-2398540 (Counterclockwise)

Preceding gene: 86749231

Following gene: 86749229

Centisome position: 45.03

GC content: 67.44

Gene sequence:

>2070_bases
ATGCGCCGAGACCAGCACGCCTCGCGGCCGACCAAGCGGATCGTGTTCGACGATCCGCATTCGGTCGACAACATGCAGGA
AGCCGAAGTCACGCGGGTCCGCTCCCTGCGCGGCGCCTGGCGCTGGGCGCTGATCGCCGCCGCGGCGGCGACGATCCTGC
TGTGCATCAACCAGCAATTCTCGCTGCGGTTCTTCGTCGGCTACACCCAGCTCAACACCGAGTATTTCTATCTCCTGATC
GCCTTGATGCTGCCGTTCACCTTCCTGATCTTCCCCGGCTCGGCGCGGGCCCGGCTCGACCGCGTGCCGTGGTACGATAT
CGTGCTGTTCGCGCTGACCGCCGTCTCCGCGCTGGTGCTGATGGCCTATGTCCGCAAGGCCGCCGAGGCCGGCTGGGAGT
TCGGCGGCGCGCCGACGCAGGTGTTCGTCGCTGGGCTGGTGATGTGGGCGCTGCTGATGGAGGCGCTGCGCCGCACCGGC
GGCTGGAGCCTCGTGCTCTGCGTGTTCCCGTTCACGGTGTATCCGCTGTTCGCCGGCGCCGGATGGCTCGGCCCGCTCGG
CGGCTCGCAATCGACGCTGGAACAGGCGACCGCCTATCACGTGCTGTCCGGCGAAAGCCTGCTCGGCATCCCGATCCAGG
CCTTCGCCGACACCGTGATCGGCTTTCTGGTGTTCGGCACCGCGCTGATGATGACCGGCGCCGGCAAATTCTTCATCAAC
CTGTCGTTCGCGATCTGCGGCACGTTCCGCGGCGGCGCCGCCAAGGTCTGCATCTTCGCCTCCGCCCTGCTCGGCATGAT
GTCCGGCTCGATCATCTCCAACGTGCTGACCGCCGGCACCATGACCATTCCGGTGATGAAGAAGAGCGGCTTCCGCGCCT
CCTATGCGGCGGCGATCGAGGCCTGCGCCTCGACCGGCGCGGTGCTGGCGCCGCCGGTGATGGGCGCCACCGCCTTCGTC
ATCGCGCAGTTCCTCAACGTCTCCTACGCCGAGGTCGCGCTCGCCGCGATCATCCCGGCCGCTCTGTTCTATATCGGCCT
GTTCATGCAGGTGGACTCCTACGCCGCGCGGCACGGGCTGGAAGGCATTCCGCGCAGCGAGCTGCCTGCCTTGGGGCAGA
CGCTGAAGGAAGGCTGGTACTACGTCTTCGTGATCGCGTTGCTGGTGGTGATGCTGCTGCACTTCAAGCGCGAGAGCCAC
GCGCCGTTCTATGCCACCGCGCTACTGCTGGTGCTCAACCAGATCTTTTCCCGCGAGACGCGCTGGACGCCGGCGACGAT
CGCCCGGTTCTTCGAGGTCAACGGCCGAACCTTCGTCGAGCTGATCGGCATTCTCGCCGGCTGCGGCCTGCTGATCGGCG
CGTTCTCGATGACCGGCGTGATCTCCAGCCTCGCCGGCGACCTGCTGCGGATCGCCGGCGACGACGTGTTCCTGCTGCTG
GTGATGTGCGCGGTGACCAGCCTCATCCTCGGCCTCGGCCTGACGACGACCGCCTGCTACATCTTCCTCGCCATCCTGGT
GGCGCCGGCGCTGGAGAAGCTCGGGCTGAACCGGATGGCGGTGCACATGTTCATCTTCTACTGGGGCATGCTGTCGTCGA
TCACGCCGCCGGTGGCGATCGCCTCCTTCGCCGCCGCCGGCATCGCCGGCTCGCCGGCGATGAAGACCGGCTGGGAATCG
ATGTGGGTCGGCAGCATCATCTATTTCATCCCGTTCTTCTTCGTGATGAACCCGGCGCTGGTGCTGCAGGGACCGGACCC
CTATGCCGCCGCGCTCGGCCTGATGGCGCTGGCGGCGCTCGGCACGCTGTTCATCTGCGGCGGCATCCAGGGCTATCAGG
TCGGTATCGGCGATCTGCGCCGCGCCGGCGCGCTGCAATGGCCGCTGCGCGTGGCGCTGGTGATCGGCGGCTTCGTGCTG
GCGACGCCGGGCGGCGGCATCAACCCGCTGTCGCAGACGCAGATCACCGGGCTCGGGCTGTGCATCCTCGCGCCGACCGT
ACTGATCGCGCTGCTGCTGGTGCGGCGCGGCGGACGATCGCGAAATATCGCAAGTCCGTCGCTGCGGTGA

Upstream 100 bases:

>100_bases
TTCGTCGACGGCTGGACGGCCGCGCGCGCCGCGGCGCTGCAGAAGGCGAAGATGCCGAACGGATTCGCGCAGTAGCCGCC
CCGACATCGACGGGGGCCAC

Downstream 100 bases:

>100_bases
AGATTTTCGCGATTATTTCACTGGACAGCCTCGGGCCGTCGGCGGAGCATCTCGGCATTTCATAGCCGGGAGTTTTGCAA
TGCAGCGCATAATGGAAGTG

Product: TRAP transporter, 4TM/12TM fusion protein

Products: NA

Alternate protein names: Trap Transporter 4tm/12tm Fusion Protein; TRAP Transporter; TRAP-Type Transport System Permease Protein; TRAP-Type Transport System Fused Permease Component; TRAP-Type Transport System Permease Component; TRAP-Type Transporter 4TM/12TM Fusion Protein; Trap Family Transporter; TRAP-Type Transporter Permease Component; Permease; TRAP-Type Transport System Permease; TRAP-Type Transporter Fused Permease Components; TRAP-T Family Transporter With Fused DctQ/DctM Subunits; TRAP Transporter Large Permease; TRAP Transport System Permease Component; TRAP Transporter 4TM/12TM Fusion Family; Trap Transporter; C4-Dicarboxylate Transporter; TRAP Type Transporter Protein; Inner Membrane Protein; TRAP-T Family Transporter Fused Inner Membrane Subunits; TRAP Transporter Transmembrane Protein; TRAP Transporter Permease; Integral Membrane Protein; N-Carbamoyl-L-Amino Acid Hydrolase; TRAP Family Transporter; TRAP-Type Transporter; 4TM/12TM TRAP Transporter; TRAP-Type Transport System; TRAP Transporter Membrane-Spanning Component

Number of amino acids: Translated: 689; Mature: 689

Protein sequence:

>689_residues
MRRDQHASRPTKRIVFDDPHSVDNMQEAEVTRVRSLRGAWRWALIAAAAATILLCINQQFSLRFFVGYTQLNTEYFYLLI
ALMLPFTFLIFPGSARARLDRVPWYDIVLFALTAVSALVLMAYVRKAAEAGWEFGGAPTQVFVAGLVMWALLMEALRRTG
GWSLVLCVFPFTVYPLFAGAGWLGPLGGSQSTLEQATAYHVLSGESLLGIPIQAFADTVIGFLVFGTALMMTGAGKFFIN
LSFAICGTFRGGAAKVCIFASALLGMMSGSIISNVLTAGTMTIPVMKKSGFRASYAAAIEACASTGAVLAPPVMGATAFV
IAQFLNVSYAEVALAAIIPAALFYIGLFMQVDSYAARHGLEGIPRSELPALGQTLKEGWYYVFVIALLVVMLLHFKRESH
APFYATALLLVLNQIFSRETRWTPATIARFFEVNGRTFVELIGILAGCGLLIGAFSMTGVISSLAGDLLRIAGDDVFLLL
VMCAVTSLILGLGLTTTACYIFLAILVAPALEKLGLNRMAVHMFIFYWGMLSSITPPVAIASFAAAGIAGSPAMKTGWES
MWVGSIIYFIPFFFVMNPALVLQGPDPYAAALGLMALAALGTLFICGGIQGYQVGIGDLRRAGALQWPLRVALVIGGFVL
ATPGGGINPLSQTQITGLGLCILAPTVLIALLLVRRGGRSRNIASPSLR

Sequences:

>Translated_689_residues
MRRDQHASRPTKRIVFDDPHSVDNMQEAEVTRVRSLRGAWRWALIAAAAATILLCINQQFSLRFFVGYTQLNTEYFYLLI
ALMLPFTFLIFPGSARARLDRVPWYDIVLFALTAVSALVLMAYVRKAAEAGWEFGGAPTQVFVAGLVMWALLMEALRRTG
GWSLVLCVFPFTVYPLFAGAGWLGPLGGSQSTLEQATAYHVLSGESLLGIPIQAFADTVIGFLVFGTALMMTGAGKFFIN
LSFAICGTFRGGAAKVCIFASALLGMMSGSIISNVLTAGTMTIPVMKKSGFRASYAAAIEACASTGAVLAPPVMGATAFV
IAQFLNVSYAEVALAAIIPAALFYIGLFMQVDSYAARHGLEGIPRSELPALGQTLKEGWYYVFVIALLVVMLLHFKRESH
APFYATALLLVLNQIFSRETRWTPATIARFFEVNGRTFVELIGILAGCGLLIGAFSMTGVISSLAGDLLRIAGDDVFLLL
VMCAVTSLILGLGLTTTACYIFLAILVAPALEKLGLNRMAVHMFIFYWGMLSSITPPVAIASFAAAGIAGSPAMKTGWES
MWVGSIIYFIPFFFVMNPALVLQGPDPYAAALGLMALAALGTLFICGGIQGYQVGIGDLRRAGALQWPLRVALVIGGFVL
ATPGGGINPLSQTQITGLGLCILAPTVLIALLLVRRGGRSRNIASPSLR
>Mature_689_residues
MRRDQHASRPTKRIVFDDPHSVDNMQEAEVTRVRSLRGAWRWALIAAAAATILLCINQQFSLRFFVGYTQLNTEYFYLLI
ALMLPFTFLIFPGSARARLDRVPWYDIVLFALTAVSALVLMAYVRKAAEAGWEFGGAPTQVFVAGLVMWALLMEALRRTG
GWSLVLCVFPFTVYPLFAGAGWLGPLGGSQSTLEQATAYHVLSGESLLGIPIQAFADTVIGFLVFGTALMMTGAGKFFIN
LSFAICGTFRGGAAKVCIFASALLGMMSGSIISNVLTAGTMTIPVMKKSGFRASYAAAIEACASTGAVLAPPVMGATAFV
IAQFLNVSYAEVALAAIIPAALFYIGLFMQVDSYAARHGLEGIPRSELPALGQTLKEGWYYVFVIALLVVMLLHFKRESH
APFYATALLLVLNQIFSRETRWTPATIARFFEVNGRTFVELIGILAGCGLLIGAFSMTGVISSLAGDLLRIAGDDVFLLL
VMCAVTSLILGLGLTTTACYIFLAILVAPALEKLGLNRMAVHMFIFYWGMLSSITPPVAIASFAAAGIAGSPAMKTGWES
MWVGSIIYFIPFFFVMNPALVLQGPDPYAAALGLMALAALGTLFICGGIQGYQVGIGDLRRAGALQWPLRVALVIGGFVL
ATPGGGINPLSQTQITGLGLCILAPTVLIALLLVRRGGRSRNIASPSLR

Specific function: Unknown

COG id: COG4666

COG function: function code R; TRAP-type uncharacterized transport system, fused permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73743; Mature: 73743

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRDQHASRPTKRIVFDDPHSVDNMQEAEVTRVRSLRGAWRWALIAAAAATILLCINQQF
CCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SLRFFVGYTQLNTEYFYLLIALMLPFTFLIFPGSARARLDRVPWYDIVLFALTAVSALVL
EEEEEEEEHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHH
MAYVRKAAEAGWEFGGAPTQVFVAGLVMWALLMEALRRTGGWSLVLCVFPFTVYPLFAGA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCC
GWLGPLGGSQSTLEQATAYHVLSGESLLGIPIQAFADTVIGFLVFGTALMMTGAGKFFIN
CCCCCCCCCHHHHHHHHHHHEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
LSFAICGTFRGGAAKVCIFASALLGMMSGSIISNVLTAGTMTIPVMKKSGFRASYAAAIE
EEHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHH
ACASTGAVLAPPVMGATAFVIAQFLNVSYAEVALAAIIPAALFYIGLFMQVDSYAARHGL
HHHCCCCEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EGIPRSELPALGQTLKEGWYYVFVIALLVVMLLHFKRESHAPFYATALLLVLNQIFSRET
CCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
RWTPATIARFFEVNGRTFVELIGILAGCGLLIGAFSMTGVISSLAGDLLRIAGDDVFLLL
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VMCAVTSLILGLGLTTTACYIFLAILVAPALEKLGLNRMAVHMFIFYWGMLSSITPPVAI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHH
ASFAAAGIAGSPAMKTGWESMWVGSIIYFIPFFFVMNPALVLQGPDPYAAALGLMALAAL
HHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHH
GTLFICGGIQGYQVGIGDLRRAGALQWPLRVALVIGGFVLATPGGGINPLSQTQITGLGL
HHHHHHCCCCCCEECHHHHHHCCCCHHHHHHHHHHCCHHEECCCCCCCCCCCHHHHHHHH
CILAPTVLIALLLVRRGGRSRNIASPSLR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRDQHASRPTKRIVFDDPHSVDNMQEAEVTRVRSLRGAWRWALIAAAAATILLCINQQF
CCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SLRFFVGYTQLNTEYFYLLIALMLPFTFLIFPGSARARLDRVPWYDIVLFALTAVSALVL
EEEEEEEEHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHH
MAYVRKAAEAGWEFGGAPTQVFVAGLVMWALLMEALRRTGGWSLVLCVFPFTVYPLFAGA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCC
GWLGPLGGSQSTLEQATAYHVLSGESLLGIPIQAFADTVIGFLVFGTALMMTGAGKFFIN
CCCCCCCCCHHHHHHHHHHHEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
LSFAICGTFRGGAAKVCIFASALLGMMSGSIISNVLTAGTMTIPVMKKSGFRASYAAAIE
EEHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHH
ACASTGAVLAPPVMGATAFVIAQFLNVSYAEVALAAIIPAALFYIGLFMQVDSYAARHGL
HHHCCCCEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EGIPRSELPALGQTLKEGWYYVFVIALLVVMLLHFKRESHAPFYATALLLVLNQIFSRET
CCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
RWTPATIARFFEVNGRTFVELIGILAGCGLLIGAFSMTGVISSLAGDLLRIAGDDVFLLL
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VMCAVTSLILGLGLTTTACYIFLAILVAPALEKLGLNRMAVHMFIFYWGMLSSITPPVAI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHH
ASFAAAGIAGSPAMKTGWESMWVGSIIYFIPFFFVMNPALVLQGPDPYAAALGLMALAAL
HHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHH
GTLFICGGIQGYQVGIGDLRRAGALQWPLRVALVIGGFVLATPGGGINPLSQTQITGLGL
HHHHHHCCCCCCEECHHHHHHCCCCHHHHHHHHHHCCHHEECCCCCCCCCCCHHHHHHHH
CILAPTVLIALLLVRRGGRSRNIASPSLR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA