| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cyp104 [H]
Identifier: 86749061
GI number: 86749061
Start: 2206614
End: 2207795
Strand: Reverse
Name: cyp104 [H]
Synonym: RPB_1938
Alternate gene names: 86749061
Gene position: 2207795-2206614 (Counterclockwise)
Preceding gene: 86749063
Following gene: 86749060
Centisome position: 41.41
GC content: 66.5
Gene sequence:
>1182_bases ATGAGCAACGCTCCCCACTTCGAGATCAATGTCGCCGCGTTCTGGGCCGATCCCTATCCGGCCTTGGCGAAGATGCGCGC GCAAGCGCCGATCGCCTTCGTGCCGCAGCTCGGCTCGACCATCTTCACCCGGCGCGACGACATCTTCGTCAACGAGAAGC GCATCGACGTGTTCTCGTCGCATCAGCCAGCCGGTTTGATGAACCGGCTGATGGGCCACAACATGATGCGCAAGGACGGC GACGCGCACCTCGCCGAACGCACCGCGATGTTTCCCGCGGTGTCGCCGCGCACCGTGAAGGAGGTCTGGCGCAAGCAGTT TCAGGCCCACGCCGATCGCATCCTCGAGGATCTCGCGCCGCGGGGCGCCGCCGATCTGGTCAAGGCGTTCGCGCTGCCGC TGTCGGGCGAATGTCTCAAAGACGTCACCGGCCTCACCAATATCAGCTATCACGAGATGGATGCGTGGTCGCAGGCGATG ATCGACGGCATCGCCAACTACACCGGCGACCGAGCGGTGGAGGATCGTTGTCACGCCGCGACCGCGGGAATCGACGCCGC GATCGACGACATGGCCCCGGTGGTGCGCAAGCATCCCGACCACTCGATGCTGAGCGTGCTGATCGCTGCCGGCATGGCGA TGGATTCGATCCGCGCCAATATCAAGCTCGCGATCTCCGGCGGACAGAACGAGCCGCGCGACGCGATCTCGGGCTGCGTC TGGGCGCTGCTGACCCATCCGTCGGAATACGCCCGGGTGGTCGCGGGCGAAGCCAGCTGGCTCGACGTGTTCGAGGAATA CGCCCGCTGGATCGCGCCGATCGGGATGTCGCCGCGCCGCGTGGCGCAGCCGTTCCATTATCGCGGCGTCGATTTCGAGC CGGAGGACCGGGTGTTCTTCATGTTCGGCTCGGCCAATCGCGACGAGGCCTGCTTCAGCGATCCGGATGTGTTCGACGTC GGCCGCGATCACGCCAAGAGCATCGCCTTCGGTGCCGGGCCGCATTATTGCGCCGGCGCCTTCGCCTCCCGCGCGATGGT CGCCGACGTCGCGCTGCCGGGCGTGTTCGCGCGGCTGACGGATCTGCGGCTCGATCCGCGCGAGCCGGTGCGGATCGGCG GCTGGGCGTTTCGCGGATTGCTCAATCTGCCGGTCGTCTGGAACAGCGCAGCGCCGAATTGA
Upstream 100 bases:
>100_bases TCACGCCGTCGGCACGAGCATTTGTATTTGACAGCCGCAGCCCGGTTCATCACGCTTGCAGTCGCCTCGCAACTTCTCCC GCACTGCAGCAGATCATCGC
Downstream 100 bases:
>100_bases AGCCGTCACCTCACCTCTGCTAAAGGTGGGGGGATAGGAATCGTTTGGGGGCGCGTGTGGCCGATACAGAAGTAACCCGC CGTGGACGTCCGGGACCGCA
Product: putative cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MSNAPHFEINVAAFWADPYPALAKMRAQAPIAFVPQLGSTIFTRRDDIFVNEKRIDVFSSHQPAGLMNRLMGHNMMRKDG DAHLAERTAMFPAVSPRTVKEVWRKQFQAHADRILEDLAPRGAADLVKAFALPLSGECLKDVTGLTNISYHEMDAWSQAM IDGIANYTGDRAVEDRCHAATAGIDAAIDDMAPVVRKHPDHSMLSVLIAAGMAMDSIRANIKLAISGGQNEPRDAISGCV WALLTHPSEYARVVAGEASWLDVFEEYARWIAPIGMSPRRVAQPFHYRGVDFEPEDRVFFMFGSANRDEACFSDPDVFDV GRDHAKSIAFGAGPHYCAGAFASRAMVADVALPGVFARLTDLRLDPREPVRIGGWAFRGLLNLPVVWNSAAPN
Sequences:
>Translated_393_residues MSNAPHFEINVAAFWADPYPALAKMRAQAPIAFVPQLGSTIFTRRDDIFVNEKRIDVFSSHQPAGLMNRLMGHNMMRKDG DAHLAERTAMFPAVSPRTVKEVWRKQFQAHADRILEDLAPRGAADLVKAFALPLSGECLKDVTGLTNISYHEMDAWSQAM IDGIANYTGDRAVEDRCHAATAGIDAAIDDMAPVVRKHPDHSMLSVLIAAGMAMDSIRANIKLAISGGQNEPRDAISGCV WALLTHPSEYARVVAGEASWLDVFEEYARWIAPIGMSPRRVAQPFHYRGVDFEPEDRVFFMFGSANRDEACFSDPDVFDV GRDHAKSIAFGAGPHYCAGAFASRAMVADVALPGVFARLTDLRLDPREPVRIGGWAFRGLLNLPVVWNSAAPN >Mature_392_residues SNAPHFEINVAAFWADPYPALAKMRAQAPIAFVPQLGSTIFTRRDDIFVNEKRIDVFSSHQPAGLMNRLMGHNMMRKDGD AHLAERTAMFPAVSPRTVKEVWRKQFQAHADRILEDLAPRGAADLVKAFALPLSGECLKDVTGLTNISYHEMDAWSQAMI DGIANYTGDRAVEDRCHAATAGIDAAIDDMAPVVRKHPDHSMLSVLIAAGMAMDSIRANIKLAISGGQNEPRDAISGCVW ALLTHPSEYARVVAGEASWLDVFEEYARWIAPIGMSPRRVAQPFHYRGVDFEPEDRVFFMFGSANRDEACFSDPDVFDVG RDHAKSIAFGAGPHYCAGAFASRAMVADVALPGVFARLTDLRLDPREPVRIGGWAFRGLLNLPVVWNSAAPN
Specific function: Not essential for virulence, but may be involved in the detoxification of plant protective agents at the site of wounding [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 43190; Mature: 43058
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAPHFEINVAAFWADPYPALAKMRAQAPIAFVPQLGSTIFTRRDDIFVNEKRIDVFSS CCCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEHHHHCCHHHCCCCCEEEECCHHHHCCC HQPAGLMNRLMGHNMMRKDGDAHLAERTAMFPAVSPRTVKEVWRKQFQAHADRILEDLAP CCCHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC RGAADLVKAFALPLSGECLKDVTGLTNISYHEMDAWSQAMIDGIANYTGDRAVEDRCHAA CCHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TAGIDAAIDDMAPVVRKHPDHSMLSVLIAAGMAMDSIRANIKLAISGGQNEPRDAISGCV HHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH WALLTHPSEYARVVAGEASWLDVFEEYARWIAPIGMSPRRVAQPFHYRGVDFEPEDRVFF HHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCEEE MFGSANRDEACFSDPDVFDVGRDHAKSIAFGAGPHYCAGAFASRAMVADVALPGVFARLT EECCCCCCCCCCCCCCHHHCCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DLRLDPREPVRIGGWAFRGLLNLPVVWNSAAPN HCCCCCCCCCEECHHHHHHHHCCCEEECCCCCC >Mature Secondary Structure SNAPHFEINVAAFWADPYPALAKMRAQAPIAFVPQLGSTIFTRRDDIFVNEKRIDVFSS CCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEHHHHCCHHHCCCCCEEEECCHHHHCCC HQPAGLMNRLMGHNMMRKDGDAHLAERTAMFPAVSPRTVKEVWRKQFQAHADRILEDLAP CCCHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC RGAADLVKAFALPLSGECLKDVTGLTNISYHEMDAWSQAMIDGIANYTGDRAVEDRCHAA CCHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TAGIDAAIDDMAPVVRKHPDHSMLSVLIAAGMAMDSIRANIKLAISGGQNEPRDAISGCV HHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH WALLTHPSEYARVVAGEASWLDVFEEYARWIAPIGMSPRRVAQPFHYRGVDFEPEDRVFF HHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCEEE MFGSANRDEACFSDPDVFDVGRDHAKSIAFGAGPHYCAGAFASRAMVADVALPGVFARLT EECCCCCCCCCCCCCCHHHCCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DLRLDPREPVRIGGWAFRGLLNLPVVWNSAAPN HCCCCCCCCCEECHHHHHHHHCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2708311 [H]