| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is treY [H]
Identifier: 86749002
GI number: 86749002
Start: 2142414
End: 2145200
Strand: Reverse
Name: treY [H]
Synonym: RPB_1879
Alternate gene names: 86749002
Gene position: 2145200-2142414 (Counterclockwise)
Preceding gene: 86749003
Following gene: 86749000
Centisome position: 40.24
GC content: 66.81
Gene sequence:
>2787_bases ATGCCTCCCGCGATCCCGACTGCGACTTACCGTATCCAGCTCACCGCCGCTTTCGGCTTCGACGATGCGGCCGCGATCGT GCCGTATCTCAAGGCGCTCGGGATTTCGCATCTCTACGCGTCGCCCTTCACCAAGGCGCGCCGCGGATCGACCCACGGCT ACGACATCGTCGATCACACCACGCTCAACCCCGAACTCGGCGGCGAAGAGGCGTTCGCGCGACTGTCCGCGGCGCTGAAG AGCCACGATATCGGCCTGATCCTCGACTTCGTCCCCAACCATGTCGGCGTTCACTTCGCCGACAATCCATGGTGGCTGGA CGTTCTGGAATGGGGCCCGGCATCGCCGCATGCCGCCTCGTTCGACATCGACTGGGAGATGCTGCCGTTCCGCAACCGCG GCGGGGTGTTGCTGCCGATCATCGGAACCTCCTACGGCAAGGCGCTGGAGAGCGGCGAGATCGGGCTACGCTACGACGCC GGCGACGGCAGTTTCTCGGCTTGGTACTTCGAACACCGGTTGCCGATCGCGCCGCAGCGCTACAGCGAGATCCTGCGTAC GATCGTACGCGAGGCCGATGCCACCGATCATCCCGCCGGCAAGGCGATCCTCGCGCTCGCCGCGCGCTATCGCGGATTGC GCCACCCGGATCGCAAGGAAGCGCCGGACTTCAAGGCGGCGCTGAAGGCTGTTCCGGGCAGCGCCGACCTGATCGACAAG GGCCTCGCCGCCTATCGGGCCGGCGAAGGCCGCAATACGCAGATTCAGGCGCTGCACAATCTGCTCGAACGCCAGCACTA CAAGCTCGGCCATTGGCAACTCGCCGCGAGCGAGATCAACTATCGCCGCTTCTTCGACGTCAACACCCTCGCCGGCTTGC GCGTCGAGGACGCCGGCACGTTCGAGGGGATCCACACGCTGGTGAAGCGGCTGATCGCCAACGGTCAGCTACAGGGCCTG CGGCTCGACCACATCGACGGCCTGCGCGACCCTGCGCAATATTTCCAGCGCCTGCGCCGGCTCACCCGCGAGGCGCAGGG GCCTGCCGCGCCGCCGCTCTACATGGTGATCGAGAAGATCCTCGGCGACGGCGAGCCGTTGCGGCGCTTCGCCGGTGTCC ACGGCACCACCGGCTACGAATGGCTGAATGTCATCACCCAGGCGCTGGTCGACGGCGCAGGCCTGCAGCCGCTCGACGAG GTCTGGCGGCAGGTGAGCAACACCTCGCCGGATTTTCCGCCGGTGCTGATGCGCGCCAAGCGCCGCGTGCTGGAGACGCT GCTGCTCAGCGAATTCACCGTGCTGACGCGGCTGCTGGCCCGGATCGCCAGCGGGCACTATTCGACGCGCGATTTCTCCG CCGACAATCTGCGGCAGGTGTTCGAACTCTACGTGCTGCACTTCCCGGTGTATCGCACCTATATCAGCGGGTCCGGCCCG AACGGACCCGATCGCGAACTGATCGCCCAGACCATCGAGAAGGCGCGCGCCGACTGGTTCGGCGCGGACGACGGCATTTT CGACTTCCTGCAGGACGCGCTGACGATGGACCTGCTGAAGGGCCGGGCCGCGCACAGCAAGCCGCGGGTGCGCCGCTTCG CGCTCAAGGTCCAGCAATTCACCGGGCCGACCATGGCGAAGTCGCTAGAGGACACCGCCTTCTATCGCTACCATCGCCTG CTCGCGCTCAACGAGGTCGGCGGCGAACCCGCCGCGCACGCGCTGGCGCCGGATGCCTTCCATCAGCTGATGACGCAGCG GGCGCAGGACTGGCCGCACGGCATGACCGCGACCATGACCCACGACGCCAAGCGCGGCGAAGACGCGCGGACGCGGCTGC TGGCGCTGGCGGAGATGCCGGGCGAATGGGCCAGCCTGGTCGCCAAATGGAAGCTGCTGAACGCGGCCCATCTGGTGACG GACGGCGCGATGCGGGCCCCGTCGGCGACGTTCGAATACATGCTGTATCAGGGCCTGCTCGGCGCCTGGCCGCTCGAACC CGACGCCGACTTCACCGACCGGATTCAGGGCTACGCGCTGAAGGCCGCGCGCGAAGGCAAAGAAGAGACCAACTGGATCA ACCCGAACCTCGCTTATGAGGAAGGCATCCGCATCTTCGTCGACCGCATTCTCGACCCCGCCCAGTCCGGCGCGTTCCTC GACTCGCTGCAGCGCGCGTCCGAGCGCGTCTCCGTGATCGGCGCGCTGAATTCGCTGAGCCAGGTCACGCTGAAGACGAT GATGCCCGGCGTCCCTGATTTGTATCAGGGCACGGAGTTCTGGGACTTCTCTCTGGTCGATCCCGACAATCGCCGCCCGG TCGATTTTGCCGCCCGCGAAAAGGCGCTCGCAGCGCTTGCCGAGCCGGACTGGGACGCGCTGCTGCGCAACTGGAGCGAC GGCCGCGTCAAGCTGGCCTGGACCCGGCAGTTGCTCGCGATCCGCAACGAACTCCGCAGCGTGTTCACCGACGGGGATTA TCGGCCGCTCGCGATCTCGGGTCCGCATCGCGACCATGCGATCGCTTTCGCCCGCACCCGCGGCGCTCAGGCCGTGATCG TGGTAGTTGGAAAGAACTTCGCACCGCTGTCGGACAACGGCCGGCGATGGCCGCGCGGCGACGCGTTCGACGCCACAGTG GATGTTTCCGGATTCACCGTCGAAGGCACGACCGGAAGCGACGTGAAGCTCTCCGAGCTGTTTCGCAATCTGCCGGTCGC GGTCCGTCAGGCGCGCCTGAGCAATCTCGCCGGCCCGGCTCGGCCACGCCGAAAGACAAGCGCCTGA
Upstream 100 bases:
>100_bases TCGCCTTCAAGGCACCGCCCGATGGAACTAATGTGTGGGGCGACGATTGGAACGGGATGATTCCGCCGTGGGCGGTGACC TGGCGCCTCGAAGAGTCCTG
Downstream 100 bases:
>100_bases ATCGCGGTCGCGGGGAGACTACAGAGCAAAGCCGTCCGGGATCTCGCGCCGGACGGCTTGGCGGATCTCGTGCCGATTGG TCATCGGTTCCCTCCTCCGC
Product: malto-oligosyltrehalose synthase
Products: NA
Alternate protein names: (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase [H]
Number of amino acids: Translated: 928; Mature: 927
Protein sequence:
>928_residues MPPAIPTATYRIQLTAAFGFDDAAAIVPYLKALGISHLYASPFTKARRGSTHGYDIVDHTTLNPELGGEEAFARLSAALK SHDIGLILDFVPNHVGVHFADNPWWLDVLEWGPASPHAASFDIDWEMLPFRNRGGVLLPIIGTSYGKALESGEIGLRYDA GDGSFSAWYFEHRLPIAPQRYSEILRTIVREADATDHPAGKAILALAARYRGLRHPDRKEAPDFKAALKAVPGSADLIDK GLAAYRAGEGRNTQIQALHNLLERQHYKLGHWQLAASEINYRRFFDVNTLAGLRVEDAGTFEGIHTLVKRLIANGQLQGL RLDHIDGLRDPAQYFQRLRRLTREAQGPAAPPLYMVIEKILGDGEPLRRFAGVHGTTGYEWLNVITQALVDGAGLQPLDE VWRQVSNTSPDFPPVLMRAKRRVLETLLLSEFTVLTRLLARIASGHYSTRDFSADNLRQVFELYVLHFPVYRTYISGSGP NGPDRELIAQTIEKARADWFGADDGIFDFLQDALTMDLLKGRAAHSKPRVRRFALKVQQFTGPTMAKSLEDTAFYRYHRL LALNEVGGEPAAHALAPDAFHQLMTQRAQDWPHGMTATMTHDAKRGEDARTRLLALAEMPGEWASLVAKWKLLNAAHLVT DGAMRAPSATFEYMLYQGLLGAWPLEPDADFTDRIQGYALKAAREGKEETNWINPNLAYEEGIRIFVDRILDPAQSGAFL DSLQRASERVSVIGALNSLSQVTLKTMMPGVPDLYQGTEFWDFSLVDPDNRRPVDFAAREKALAALAEPDWDALLRNWSD GRVKLAWTRQLLAIRNELRSVFTDGDYRPLAISGPHRDHAIAFARTRGAQAVIVVVGKNFAPLSDNGRRWPRGDAFDATV DVSGFTVEGTTGSDVKLSELFRNLPVAVRQARLSNLAGPARPRRKTSA
Sequences:
>Translated_928_residues MPPAIPTATYRIQLTAAFGFDDAAAIVPYLKALGISHLYASPFTKARRGSTHGYDIVDHTTLNPELGGEEAFARLSAALK SHDIGLILDFVPNHVGVHFADNPWWLDVLEWGPASPHAASFDIDWEMLPFRNRGGVLLPIIGTSYGKALESGEIGLRYDA GDGSFSAWYFEHRLPIAPQRYSEILRTIVREADATDHPAGKAILALAARYRGLRHPDRKEAPDFKAALKAVPGSADLIDK GLAAYRAGEGRNTQIQALHNLLERQHYKLGHWQLAASEINYRRFFDVNTLAGLRVEDAGTFEGIHTLVKRLIANGQLQGL RLDHIDGLRDPAQYFQRLRRLTREAQGPAAPPLYMVIEKILGDGEPLRRFAGVHGTTGYEWLNVITQALVDGAGLQPLDE VWRQVSNTSPDFPPVLMRAKRRVLETLLLSEFTVLTRLLARIASGHYSTRDFSADNLRQVFELYVLHFPVYRTYISGSGP NGPDRELIAQTIEKARADWFGADDGIFDFLQDALTMDLLKGRAAHSKPRVRRFALKVQQFTGPTMAKSLEDTAFYRYHRL LALNEVGGEPAAHALAPDAFHQLMTQRAQDWPHGMTATMTHDAKRGEDARTRLLALAEMPGEWASLVAKWKLLNAAHLVT DGAMRAPSATFEYMLYQGLLGAWPLEPDADFTDRIQGYALKAAREGKEETNWINPNLAYEEGIRIFVDRILDPAQSGAFL DSLQRASERVSVIGALNSLSQVTLKTMMPGVPDLYQGTEFWDFSLVDPDNRRPVDFAAREKALAALAEPDWDALLRNWSD GRVKLAWTRQLLAIRNELRSVFTDGDYRPLAISGPHRDHAIAFARTRGAQAVIVVVGKNFAPLSDNGRRWPRGDAFDATV DVSGFTVEGTTGSDVKLSELFRNLPVAVRQARLSNLAGPARPRRKTSA >Mature_927_residues PPAIPTATYRIQLTAAFGFDDAAAIVPYLKALGISHLYASPFTKARRGSTHGYDIVDHTTLNPELGGEEAFARLSAALKS HDIGLILDFVPNHVGVHFADNPWWLDVLEWGPASPHAASFDIDWEMLPFRNRGGVLLPIIGTSYGKALESGEIGLRYDAG DGSFSAWYFEHRLPIAPQRYSEILRTIVREADATDHPAGKAILALAARYRGLRHPDRKEAPDFKAALKAVPGSADLIDKG LAAYRAGEGRNTQIQALHNLLERQHYKLGHWQLAASEINYRRFFDVNTLAGLRVEDAGTFEGIHTLVKRLIANGQLQGLR LDHIDGLRDPAQYFQRLRRLTREAQGPAAPPLYMVIEKILGDGEPLRRFAGVHGTTGYEWLNVITQALVDGAGLQPLDEV WRQVSNTSPDFPPVLMRAKRRVLETLLLSEFTVLTRLLARIASGHYSTRDFSADNLRQVFELYVLHFPVYRTYISGSGPN GPDRELIAQTIEKARADWFGADDGIFDFLQDALTMDLLKGRAAHSKPRVRRFALKVQQFTGPTMAKSLEDTAFYRYHRLL ALNEVGGEPAAHALAPDAFHQLMTQRAQDWPHGMTATMTHDAKRGEDARTRLLALAEMPGEWASLVAKWKLLNAAHLVTD GAMRAPSATFEYMLYQGLLGAWPLEPDADFTDRIQGYALKAAREGKEETNWINPNLAYEEGIRIFVDRILDPAQSGAFLD SLQRASERVSVIGALNSLSQVTLKTMMPGVPDLYQGTEFWDFSLVDPDNRRPVDFAAREKALAALAEPDWDALLRNWSDG RVKLAWTRQLLAIRNELRSVFTDGDYRPLAISGPHRDHAIAFARTRGAQAVIVVVGKNFAPLSDNGRRWPRGDAFDATVD VSGFTVEGTTGSDVKLSELFRNLPVAVRQARLSNLAGPARPRRKTSA
Specific function: Catalyzes the conversion of maltooligosaccharide into the non-reducing saccharide, maltooligosyl trehalose (alpha- maltooligosyl alpha-D-glucoside) by intramolecular transglycosylation [H]
COG id: COG3280
COG function: function code G; Maltooligosyl trehalose synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006047 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013797 - InterPro: IPR012767 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.15 [H]
Molecular weight: Translated: 103114; Mature: 102983
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPAIPTATYRIQLTAAFGFDDAAAIVPYLKALGISHLYASPFTKARRGSTHGYDIVDHT CCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCC TLNPELGGEEAFARLSAALKSHDIGLILDFVPNHVGVHFADNPWWLDVLEWGPASPHAAS CCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCEEEEEEECCCCCCCCCE FDIDWEMLPFRNRGGVLLPIIGTSYGKALESGEIGLRYDAGDGSFSAWYFEHRLPIAPQR ECCCEEECCCCCCCCEEEEEECCCHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCCHHH YSEILRTIVREADATDHPAGKAILALAARYRGLRHPDRKEAPDFKAALKAVPGSADLIDK HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHH GLAAYRAGEGRNTQIQALHNLLERQHYKLGHWQLAASEINYRRFFDVNTLAGLRVEDAGT HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCEEECCCCCCCCEECCCCC FEGIHTLVKRLIANGQLQGLRLDHIDGLRDPAQYFQRLRRLTREAQGPAAPPLYMVIEKI HHHHHHHHHHHHCCCCCCCEEEHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LGDGEPLRRFAGVHGTTGYEWLNVITQALVDGAGLQPLDEVWRQVSNTSPDFPPVLMRAK HCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHH RRVLETLLLSEFTVLTRLLARIASGHYSTRDFSADNLRQVFELYVLHFPVYRTYISGSGP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCC NGPDRELIAQTIEKARADWFGADDGIFDFLQDALTMDLLKGRAAHSKPRVRRFALKVQQF CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH TGPTMAKSLEDTAFYRYHRLLALNEVGGEPAAHALAPDAFHQLMTQRAQDWPHGMTATMT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEE HDAKRGEDARTRLLALAEMPGEWASLVAKWKLLNAAHLVTDGAMRAPSATFEYMLYQGLL CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH GAWPLEPDADFTDRIQGYALKAAREGKEETNWINPNLAYEEGIRIFVDRILDPAQSGAFL CCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHH DSLQRASERVSVIGALNSLSQVTLKTMMPGVPDLYQGTEFWDFSLVDPDNRRPVDFAARE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEEEEECCCCCCCCCHHHHH KALAALAEPDWDALLRNWSDGRVKLAWTRQLLAIRNELRSVFTDGDYRPLAISGPHRDHA HHHHHHCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCE IAFARTRGAQAVIVVVGKNFAPLSDNGRRWPRGDAFDATVDVSGFTVEGTTGSDVKLSEL EEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCHHHH FRNLPVAVRQARLSNLAGPARPRRKTSA HHHCCHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PPAIPTATYRIQLTAAFGFDDAAAIVPYLKALGISHLYASPFTKARRGSTHGYDIVDHT CCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCC TLNPELGGEEAFARLSAALKSHDIGLILDFVPNHVGVHFADNPWWLDVLEWGPASPHAAS CCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCEEEEEEECCCCCCCCCE FDIDWEMLPFRNRGGVLLPIIGTSYGKALESGEIGLRYDAGDGSFSAWYFEHRLPIAPQR ECCCEEECCCCCCCCEEEEEECCCHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCCHHH YSEILRTIVREADATDHPAGKAILALAARYRGLRHPDRKEAPDFKAALKAVPGSADLIDK HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHH GLAAYRAGEGRNTQIQALHNLLERQHYKLGHWQLAASEINYRRFFDVNTLAGLRVEDAGT HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCEEECCCCCCCCEECCCCC FEGIHTLVKRLIANGQLQGLRLDHIDGLRDPAQYFQRLRRLTREAQGPAAPPLYMVIEKI HHHHHHHHHHHHCCCCCCCEEEHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LGDGEPLRRFAGVHGTTGYEWLNVITQALVDGAGLQPLDEVWRQVSNTSPDFPPVLMRAK HCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHH RRVLETLLLSEFTVLTRLLARIASGHYSTRDFSADNLRQVFELYVLHFPVYRTYISGSGP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCC NGPDRELIAQTIEKARADWFGADDGIFDFLQDALTMDLLKGRAAHSKPRVRRFALKVQQF CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH TGPTMAKSLEDTAFYRYHRLLALNEVGGEPAAHALAPDAFHQLMTQRAQDWPHGMTATMT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEE HDAKRGEDARTRLLALAEMPGEWASLVAKWKLLNAAHLVTDGAMRAPSATFEYMLYQGLL CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH GAWPLEPDADFTDRIQGYALKAAREGKEETNWINPNLAYEEGIRIFVDRILDPAQSGAFL CCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHH DSLQRASERVSVIGALNSLSQVTLKTMMPGVPDLYQGTEFWDFSLVDPDNRRPVDFAARE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEEEEECCCCCCCCCHHHHH KALAALAEPDWDALLRNWSDGRVKLAWTRQLLAIRNELRSVFTDGDYRPLAISGPHRDHA HHHHHHCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCE IAFARTRGAQAVIVVVGKNFAPLSDNGRRWPRGDAFDATVDVSGFTVEGTTGSDVKLSEL EEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCHHHH FRNLPVAVRQARLSNLAGPARPRRKTSA HHHCCHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8605217; 8611744 [H]