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The map label for this gene is 86748965

Identifier: 86748965

GI number: 86748965

Start: 2108319

End: 2109188

Strand: Reverse

Name: 86748965

Synonym: RPB_1842

Alternate gene names: NA

Gene position: 2109188-2108319 (Counterclockwise)

Preceding gene: 86748966

Following gene: 86748963

Centisome position: 39.56

GC content: 70.8

Gene sequence:

>870_bases
ATGATCCTGAGGGAGACCATCATGACACCGCAAGAGCGCCAGCTTGTGGACGATCTGTTCGAAAGGCTCGCCCGCCTCGA
ATCCGCGCCGCGCGATCCGGACGCAGCCGCGGCGATCGCCCAGGGCCAGCGGATTGCGCCCAACGCGATCTATGGGCTGG
TGCAGACCGTGCTGGTGCAGGACGAGGCGCTGAAGCGCGCTCACGACCGCATCCAGGAACTGGAAGGCCAGAACGAAACC
GAGGCCCATCGCGGCGGCGGCTTCCTCGACACGATGCGGGATACGATCTTCGGCCAAAGCCAGCCGCAGCAGCGCAGTTC
GGTCCCGAACGTGCCGCCTCCCGGCACTGGCGGCGGCCGGCCGGCCTGGAATACCGGGCAGGTGCTGGGTCAGCAGCAGA
TGGGGCAACCTTCCCCCGGCCAATACGCGCCGCAGCAGGGCGGCGGATTCGGTGGTCCGTTCGGTGGCGGCGCGCCTTCT
CCGGCCGGCGGTGGCGGTGGATCGTTCCTCGGCACCGCGGCGGCGGCGGCAGCGGGCGTGGTCGGCGGCTCGCTGCTGCT
GTCGAGCATCCGCGGCATGATGGGCGGCGGCAGCGGCCAGCAGAGCATGGCCGATCAGTCCGGCCTCGGCGGCGGCACCC
AGAGCCCGTGGGGCGGCGAGTCCTCGGGCGGCAACCTCGCGCAACAGGCCGGCCTGGGCGACATCGGCTCACAGCGCGGC
GGCGTCGACGACGGCGGTTCGTCGCGCCAGAGCGCGATGGATCCGGGATCGAACGGCGATCGCGATCAGGTCGCGGACGC
CGGCTACGACCAGGACGACATGGATCTGGATTCGGATTTCGACGGCGGCGGCGACAGCGACTTCGCCTGA

Upstream 100 bases:

>100_bases
AATCCGCCCGGGACTTATTGCGGCCCGGCCCGCTCCCTACATTTTTCAGCACTCGCGCGCGTCGCGCCGCATCCGGCGGG
CTGCGTCGCGCGGAGCAACG

Downstream 100 bases:

>100_bases
GCCGCCCGGGTTCGCCACAGCCCGACCTGAAACGGCCGCCCACGGGCGGCCGTTGTCGTGAGTGGCGCAGCGGCTCAGAT
CACCACCACCCGCGCGCCGA

Product: putative periplasmic ligand-binding sensor protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MILRETIMTPQERQLVDDLFERLARLESAPRDPDAAAAIAQGQRIAPNAIYGLVQTVLVQDEALKRAHDRIQELEGQNET
EAHRGGGFLDTMRDTIFGQSQPQQRSSVPNVPPPGTGGGRPAWNTGQVLGQQQMGQPSPGQYAPQQGGGFGGPFGGGAPS
PAGGGGGSFLGTAAAAAAGVVGGSLLLSSIRGMMGGGSGQQSMADQSGLGGGTQSPWGGESSGGNLAQQAGLGDIGSQRG
GVDDGGSSRQSAMDPGSNGDRDQVADAGYDQDDMDLDSDFDGGGDSDFA

Sequences:

>Translated_289_residues
MILRETIMTPQERQLVDDLFERLARLESAPRDPDAAAAIAQGQRIAPNAIYGLVQTVLVQDEALKRAHDRIQELEGQNET
EAHRGGGFLDTMRDTIFGQSQPQQRSSVPNVPPPGTGGGRPAWNTGQVLGQQQMGQPSPGQYAPQQGGGFGGPFGGGAPS
PAGGGGGSFLGTAAAAAAGVVGGSLLLSSIRGMMGGGSGQQSMADQSGLGGGTQSPWGGESSGGNLAQQAGLGDIGSQRG
GVDDGGSSRQSAMDPGSNGDRDQVADAGYDQDDMDLDSDFDGGGDSDFA
>Mature_289_residues
MILRETIMTPQERQLVDDLFERLARLESAPRDPDAAAAIAQGQRIAPNAIYGLVQTVLVQDEALKRAHDRIQELEGQNET
EAHRGGGFLDTMRDTIFGQSQPQQRSSVPNVPPPGTGGGRPAWNTGQVLGQQQMGQPSPGQYAPQQGGGFGGPFGGGAPS
PAGGGGGSFLGTAAAAAAGVVGGSLLLSSIRGMMGGGSGQQSMADQSGLGGGTQSPWGGESSGGNLAQQAGLGDIGSQRG
GVDDGGSSRQSAMDPGSNGDRDQVADAGYDQDDMDLDSDFDGGGDSDFA

Specific function: Unknown

COG id: COG3416

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29228; Mature: 29228

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILRETIMTPQERQLVDDLFERLARLESAPRDPDAAAAIAQGQRIAPNAIYGLVQTVLVQ
CCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
DEALKRAHDRIQELEGQNETEAHRGGGFLDTMRDTIFGQSQPQQRSSVPNVPPPGTGGGR
HHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC
PAWNTGQVLGQQQMGQPSPGQYAPQQGGGFGGPFGGGAPSPAGGGGGSFLGTAAAAAAGV
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
VGGSLLLSSIRGMMGGGSGQQSMADQSGLGGGTQSPWGGESSGGNLAQQAGLGDIGSQRG
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHCCC
GVDDGGSSRQSAMDPGSNGDRDQVADAGYDQDDMDLDSDFDGGGDSDFA
CCCCCCCCHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MILRETIMTPQERQLVDDLFERLARLESAPRDPDAAAAIAQGQRIAPNAIYGLVQTVLVQ
CCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
DEALKRAHDRIQELEGQNETEAHRGGGFLDTMRDTIFGQSQPQQRSSVPNVPPPGTGGGR
HHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC
PAWNTGQVLGQQQMGQPSPGQYAPQQGGGFGGPFGGGAPSPAGGGGGSFLGTAAAAAAGV
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
VGGSLLLSSIRGMMGGGSGQQSMADQSGLGGGTQSPWGGESSGGNLAQQAGLGDIGSQRG
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHCCC
GVDDGGSSRQSAMDPGSNGDRDQVADAGYDQDDMDLDSDFDGGGDSDFA
CCCCCCCCHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA