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The map label for this gene is fixC [C]

Identifier: 86748957

GI number: 86748957

Start: 2099051

End: 2100565

Strand: Reverse

Name: fixC [C]

Synonym: RPB_1834

Alternate gene names: 86748957

Gene position: 2100565-2099051 (Counterclockwise)

Preceding gene: 86748958

Following gene: 86748955

Centisome position: 39.4

GC content: 71.62

Gene sequence:

>1515_bases
ATGACGCGCTTTGACGTAGTGGTGATCGGCGCCGGCCTCGGCGGCCTGACCGCGGGCGCGATCCTCGCGCACGAGGGCCG
CAAGGTGCTGGTGCTGGAGCGCGGCAATTCGGTCGGCGGCGCGGCGTCGAGCTACAAGGTCGGCGATCTGTTCGTCGAGG
GCTCGCTGCATATCACCGGCGATCCGCTGCATCCGCGCGATCCCAAGCACGCCGCGCTCGGCCGCGCCGGCGTGCGCGAC
GCGGTGGCATTCGTTCCCGCCGGCGCGCTGTACGAGATCCGCGGCGGGCCGCTGGCGCAGCCCTTCGTGCTGCCGGATGA
TTTCGCCGGCGCCCGCATGGCGCTGCTGGCGCGGTTTCCCGACGCTCGCCGCGGCATCGAACAATTCCTCGGCGAGATGC
AGCGGCTGGCTTCGGCCGCCGGCGACGGCGGGCTCGACGCCGTGTTCGCGCTGGCGCCGGAATTTCCCGACTGGTCGTCG
TCGCTGGCCGACAAGCTGCAGGCGCTGTTCGGCGACGACGAAGCGCTGAAATGCGCGATCGCCGGCAACCTCTCCTACTT
CCACGACGACCCCGCCACGCTGTGGTGGGTTCCGTTCGCGCTGATGCAGGGCAGCTTCCTGTTGACCGGCGCGCGCTACG
TCCAGGGCGGCTCGCAGCGGCTGTCGAGCGCCCTCGCCCGCGCGATACGCAAGGGCGGCGGCGATGTGATGCTGCGCCGC
GCCGTCAGCGGCATCGCGATGGGTGAGCCCGGCGCGATCCATCGCATCGCCCACACCGCGCGCGACGGCAGCGATCCGCA
ATCGGTCGAAGCGCTGACGGTGATCGGCAACGCCGCGCCGGGCGCGCTCGCGGCACTGATGCCCGATGCGCAGGGCCAGC
GGCTCACCGAGAGCTATGCCGGCCGGACGCTGTCGCTGTCGCTGTTCGCGCTGACGCTGGGCCTGTCCCAGCCGCCGCGC
GACTTCGGCGTCACCAGCTACTCGACGCAGTTGCTGCCGGACTGGATGGAGACGCTCGCCTGCTACGCCGACGGCAAGGC
GCTGATGGCCGGCGAGCCCGCCGAGCGGATGCCGCCGCTGGCGATCGCCGACTACGCCGCGATCGACTCCGGCGTGCCGT
CGCCGCCTTTTGTGCTGTCGGTGGTCGGGCCCGACCAGATCGCGAACTGGAGCGGCCTCGATCAGGACGACTACCGCGCC
AAGCGCGGCCGCTGGCAGCAGGCGATCGTCGCCCATCTCGACCGAAACTATCCGGGATTGGCCGGCGCGGTGACCGCGGC
CTCGTTCAACGTCGCGCTGTCGGTGCAGCAATATCTCAACGTGCCGCAGGGCTCGGTCTACGGCTTCGCGCCGCTGCCGC
CGAACGACAGCGGCGCGCCGTATCGGTCGCCGCGCACGGTTCTGCCGGGGCTGTATCTGTCGTCCGCCTATGCGGGCCTC
GGCGGCTACAGCGGCGTGGTGCAGGCGGCGGCGGCATGTGCCGACGCCATCCTGCGCGACGGCCCGACGAGTTAG

Upstream 100 bases:

>100_bases
GGAGAGGTGAGAGGCCACCGTTGCCGCAGGAGCGCGATTTGACATGCCGCTGCATTGCGGCAATGAAGCGCTTCCCTCCG
GCGGCAGGATGTTCGGTTGA

Downstream 100 bases:

>100_bases
TTGCTGTTGAGCCGGAACCGCAGCGTCTCGCCGCCCGAGAACGTCACATAGTCGCCCTGCCGGCTCCAGCCGGTGGCCGC
CGTCAGCGCTGCGACCAGCG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: Phytoene Dehydrogenase-Like Protein; Amine Oxidase; All-Trans-Retinol

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MTRFDVVVIGAGLGGLTAGAILAHEGRKVLVLERGNSVGGAASSYKVGDLFVEGSLHITGDPLHPRDPKHAALGRAGVRD
AVAFVPAGALYEIRGGPLAQPFVLPDDFAGARMALLARFPDARRGIEQFLGEMQRLASAAGDGGLDAVFALAPEFPDWSS
SLADKLQALFGDDEALKCAIAGNLSYFHDDPATLWWVPFALMQGSFLLTGARYVQGGSQRLSSALARAIRKGGGDVMLRR
AVSGIAMGEPGAIHRIAHTARDGSDPQSVEALTVIGNAAPGALAALMPDAQGQRLTESYAGRTLSLSLFALTLGLSQPPR
DFGVTSYSTQLLPDWMETLACYADGKALMAGEPAERMPPLAIADYAAIDSGVPSPPFVLSVVGPDQIANWSGLDQDDYRA
KRGRWQQAIVAHLDRNYPGLAGAVTAASFNVALSVQQYLNVPQGSVYGFAPLPPNDSGAPYRSPRTVLPGLYLSSAYAGL
GGYSGVVQAAAACADAILRDGPTS

Sequences:

>Translated_504_residues
MTRFDVVVIGAGLGGLTAGAILAHEGRKVLVLERGNSVGGAASSYKVGDLFVEGSLHITGDPLHPRDPKHAALGRAGVRD
AVAFVPAGALYEIRGGPLAQPFVLPDDFAGARMALLARFPDARRGIEQFLGEMQRLASAAGDGGLDAVFALAPEFPDWSS
SLADKLQALFGDDEALKCAIAGNLSYFHDDPATLWWVPFALMQGSFLLTGARYVQGGSQRLSSALARAIRKGGGDVMLRR
AVSGIAMGEPGAIHRIAHTARDGSDPQSVEALTVIGNAAPGALAALMPDAQGQRLTESYAGRTLSLSLFALTLGLSQPPR
DFGVTSYSTQLLPDWMETLACYADGKALMAGEPAERMPPLAIADYAAIDSGVPSPPFVLSVVGPDQIANWSGLDQDDYRA
KRGRWQQAIVAHLDRNYPGLAGAVTAASFNVALSVQQYLNVPQGSVYGFAPLPPNDSGAPYRSPRTVLPGLYLSSAYAGL
GGYSGVVQAAAACADAILRDGPTS
>Mature_503_residues
TRFDVVVIGAGLGGLTAGAILAHEGRKVLVLERGNSVGGAASSYKVGDLFVEGSLHITGDPLHPRDPKHAALGRAGVRDA
VAFVPAGALYEIRGGPLAQPFVLPDDFAGARMALLARFPDARRGIEQFLGEMQRLASAAGDGGLDAVFALAPEFPDWSSS
LADKLQALFGDDEALKCAIAGNLSYFHDDPATLWWVPFALMQGSFLLTGARYVQGGSQRLSSALARAIRKGGGDVMLRRA
VSGIAMGEPGAIHRIAHTARDGSDPQSVEALTVIGNAAPGALAALMPDAQGQRLTESYAGRTLSLSLFALTLGLSQPPRD
FGVTSYSTQLLPDWMETLACYADGKALMAGEPAERMPPLAIADYAAIDSGVPSPPFVLSVVGPDQIANWSGLDQDDYRAK
RGRWQQAIVAHLDRNYPGLAGAVTAASFNVALSVQQYLNVPQGSVYGFAPLPPNDSGAPYRSPRTVLPGLYLSSAYAGLG
GYSGVVQAAAACADAILRDGPTS

Specific function: Probably Accepts Electrons From Fixa/Fixb And Reduces A Quinone. [C]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52569; Mature: 52438

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRFDVVVIGAGLGGLTAGAILAHEGRKVLVLERGNSVGGAASSYKVGDLFVEGSLHITG
CCCEEEEEEECCCCHHHHHHHEEECCCEEEEEECCCCCCCCCCCCEECEEEEECEEEEEC
DPLHPRDPKHAALGRAGVRDAVAFVPAGALYEIRGGPLAQPFVLPDDFAGARMALLARFP
CCCCCCCCCHHHHCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCC
DARRGIEQFLGEMQRLASAAGDGGLDAVFALAPEFPDWSSSLADKLQALFGDDEALKCAI
HHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHCCCHHEEEEE
AGNLSYFHDDPATLWWVPFALMQGSFLLTGARYVQGGSQRLSSALARAIRKGGGDVMLRR
ECCCCEEECCCCEEHHHHHHHHCCCEEEECHHHHCCHHHHHHHHHHHHHHHCCCHHHHHH
AVSGIAMGEPGAIHRIAHTARDGSDPQSVEALTVIGNAAPGALAALMPDAQGQRLTESYA
HHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHC
GRTLSLSLFALTLGLSQPPRDFGVTSYSTQLLPDWMETLACYADGKALMAGEPAERMPPL
CCEEEEEHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHCCCE
AIADYAAIDSGVPSPPFVLSVVGPDQIANWSGLDQDDYRAKRGRWQQAIVAHLDRNYPGL
EEHHHHHHCCCCCCCCEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
AGAVTAASFNVALSVQQYLNVPQGSVYGFAPLPPNDSGAPYRSPRTVLPGLYLSSAYAGL
HHHHHHHHHHEEEEHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
GGYSGVVQAAAACADAILRDGPTS
CCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TRFDVVVIGAGLGGLTAGAILAHEGRKVLVLERGNSVGGAASSYKVGDLFVEGSLHITG
CCEEEEEEECCCCHHHHHHHEEECCCEEEEEECCCCCCCCCCCCEECEEEEECEEEEEC
DPLHPRDPKHAALGRAGVRDAVAFVPAGALYEIRGGPLAQPFVLPDDFAGARMALLARFP
CCCCCCCCCHHHHCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCC
DARRGIEQFLGEMQRLASAAGDGGLDAVFALAPEFPDWSSSLADKLQALFGDDEALKCAI
HHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHCCCHHEEEEE
AGNLSYFHDDPATLWWVPFALMQGSFLLTGARYVQGGSQRLSSALARAIRKGGGDVMLRR
ECCCCEEECCCCEEHHHHHHHHCCCEEEECHHHHCCHHHHHHHHHHHHHHHCCCHHHHHH
AVSGIAMGEPGAIHRIAHTARDGSDPQSVEALTVIGNAAPGALAALMPDAQGQRLTESYA
HHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHC
GRTLSLSLFALTLGLSQPPRDFGVTSYSTQLLPDWMETLACYADGKALMAGEPAERMPPL
CCEEEEEHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHCCCE
AIADYAAIDSGVPSPPFVLSVVGPDQIANWSGLDQDDYRAKRGRWQQAIVAHLDRNYPGL
EEHHHHHHCCCCCCCCEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
AGAVTAASFNVALSVQQYLNVPQGSVYGFAPLPPNDSGAPYRSPRTVLPGLYLSSAYAGL
HHHHHHHHHHEEEEHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
GGYSGVVQAAAACADAILRDGPTS
CCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on NADH or NADPH; With a quinone or similar compound as acceptor [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA