| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748910
Identifier: 86748910
GI number: 86748910
Start: 2049018
End: 2049182
Strand: Reverse
Name: 86748910
Synonym: RPB_1787
Alternate gene names: NA
Gene position: 2049182-2049018 (Counterclockwise)
Preceding gene: 86748914
Following gene: 86748909
Centisome position: 38.43
GC content: 58.79
Gene sequence:
>165_bases ATGAAGACCATTTTCGCTCGTTTCGTTAAGGACGAATCCGGCGCCACCGCCATCGAATACGGCCTGATCGCCGCCGGCAT CGCGCTGGCCATCATCGCCGTCATCAACGGCATGGGCACCAAGCTGAACACCGCCTTCACGAGCATCAACACCGCGCTCA AGTAA
Upstream 100 bases:
>100_bases CTGCAATTTCCCGATCCTAGGGTGACGCCATGGTCGCGGTGCCGAGAACGCCGGAAAGACCACAGTTAGTTCGACAGCCA CGTGTACATGGAGCACTCCG
Downstream 100 bases:
>100_bases GCGGTCGCGGCCTCTTCAAGAAAGGCTCCGGCATGCCGGGGCCTTTTTTATTTCCCGACGTTTCCGCCGCTCGCCGGCGA TCGAGTTTGCGTGACATGAA
Product: Flp/Fap pilin component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 54
Protein sequence:
>54_residues MKTIFARFVKDESGATAIEYGLIAAGIALAIIAVINGMGTKLNTAFTSINTALK
Sequences:
>Translated_54_residues MKTIFARFVKDESGATAIEYGLIAAGIALAIIAVINGMGTKLNTAFTSINTALK >Mature_54_residues MKTIFARFVKDESGATAIEYGLIAAGIALAIIAVINGMGTKLNTAFTSINTALK
Specific function: Unknown
COG id: COG3847
COG function: function code U; Flp pilus assembly protein, pilin Flp
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5603; Mature: 5603
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIFARFVKDESGATAIEYGLIAAGIALAIIAVINGMGTKLNTAFTSINTALK CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKTIFARFVKDESGATAIEYGLIAAGIALAIIAVINGMGTKLNTAFTSINTALK CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA