Definition | Rhodopseudomonas palustris HaA2, complete genome. |
---|---|
Accession | NC_007778 |
Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86748781
Identifier: 86748781
GI number: 86748781
Start: 1887537
End: 1888454
Strand: Reverse
Name: 86748781
Synonym: RPB_1658
Alternate gene names: NA
Gene position: 1888454-1887537 (Counterclockwise)
Preceding gene: 86748782
Following gene: 86748775
Centisome position: 35.42
GC content: 67.21
Gene sequence:
>918_bases ATGGCTCACCCAAACGCACCTTCGGCGAACCGACCTGCCGATCCGAGAGATGACTGGGCACGGCTCTCCCGGAGCGAGCG CGACGCCGCCTACGACAACAACACCGCGGTCGCCGACAGCCCGGCCTTGATCGCCGAACGGAACGTGGCCTCTGCGCAGG CGCGCGCGACGCTGCGGTCAGTGCTCGACCTGCCTTATGGTCCTCGCACGAACAACAAGATCGACCTCTATCCGGCGGCC GACCCGGATGCGCCCTGCCTGCTGTTCCTGCACGGCGGCTACTGGCAGAAGAATTCGCGCGAACTGTTCGCCATGATGGT CGAAGGCGTCGCGGCGCATGGCTGGTCGATGGCGATCCCCGGCTATTCGCTGGCGCCCGAAGTATCGCTCACCGAAATCG TCGACGAGGTGCGGCAGGCGCTGGACTGGCTCGCCGCGCATGCGCCGGACCATGGCGTCGCCGGTCCGATGATCACCTCG GGCTGGTCGGCCGGCGGCCATCTCGTGGCGATGACGCTCGACCATCCGCTGGTCGCGGCCGGGCTTTCGATCTCCGGCGT GTTCGATCTGGCGCCGCTCCGCGACACCGGCCTGAACGATGCGCTCAAACTGACCGATGCCGAGATCGAAACGCTGTCGC CGCTGCGACTGCCGGTGATCGACAAGCGTCTCGACCTCGCCTATGGCGATCATGAACTGCCGACGCTGGTGCTGGATTCC ATCAACTTCTACGAGCGTCGCTGCGCCGCGGGCGCGCCGGGGCGGCTGCTGCCGATCGCGGGGCACAATCACTTCTCGAT TTTGGCAGAGCTGCGCCGAGCCGACGGCGCGCTGGTACGCGCCGCGCGCGATCTGGCAGGCGAGACCGGAGATGATCGCA CTTCAGCATTGCGATCGGGCGCGGCCTTTCCCGAGTAG
Upstream 100 bases:
>100_bases CGATTCCAGTGGCGCACGAGATCACCAAGGCCACGCTGTCACCATTGGCGAAGGAGGAGCGCACGCTGTTCCTCAGCCTG CTCGAACGATTGAAATAGCC
Downstream 100 bases:
>100_bases TGCTCCGGCGGCCGAAAACCGGATCATGCCGATGTATCCGAAGCGTGGGCGCAGCATCGCGGCGTCAGCTTCCACGGCTT CAGGCCCGCCAGCGTCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: Esterase/Lipase/Thioesterase; Esterase/Lipase-Like Protein; Arylformamidase; Esterase/Lipase; Lipase/Esterase; N-Acetylanthranilate Amidase; Lipase; Esterase/Lipase/Thiestherase Protein; Aylformamidase; Kynurenine Formamidase; Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Domain-Containing Protein; Carboxylesterase Family Protein; Hydrolase; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Alpha/Beta Hydrolase Fold-3 Domain Protein
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MAHPNAPSANRPADPRDDWARLSRSERDAAYDNNTAVADSPALIAERNVASAQARATLRSVLDLPYGPRTNNKIDLYPAA DPDAPCLLFLHGGYWQKNSRELFAMMVEGVAAHGWSMAIPGYSLAPEVSLTEIVDEVRQALDWLAAHAPDHGVAGPMITS GWSAGGHLVAMTLDHPLVAAGLSISGVFDLAPLRDTGLNDALKLTDAEIETLSPLRLPVIDKRLDLAYGDHELPTLVLDS INFYERRCAAGAPGRLLPIAGHNHFSILAELRRADGALVRAARDLAGETGDDRTSALRSGAAFPE
Sequences:
>Translated_305_residues MAHPNAPSANRPADPRDDWARLSRSERDAAYDNNTAVADSPALIAERNVASAQARATLRSVLDLPYGPRTNNKIDLYPAA DPDAPCLLFLHGGYWQKNSRELFAMMVEGVAAHGWSMAIPGYSLAPEVSLTEIVDEVRQALDWLAAHAPDHGVAGPMITS GWSAGGHLVAMTLDHPLVAAGLSISGVFDLAPLRDTGLNDALKLTDAEIETLSPLRLPVIDKRLDLAYGDHELPTLVLDS INFYERRCAAGAPGRLLPIAGHNHFSILAELRRADGALVRAARDLAGETGDDRTSALRSGAAFPE >Mature_304_residues AHPNAPSANRPADPRDDWARLSRSERDAAYDNNTAVADSPALIAERNVASAQARATLRSVLDLPYGPRTNNKIDLYPAAD PDAPCLLFLHGGYWQKNSRELFAMMVEGVAAHGWSMAIPGYSLAPEVSLTEIVDEVRQALDWLAAHAPDHGVAGPMITSG WSAGGHLVAMTLDHPLVAAGLSISGVFDLAPLRDTGLNDALKLTDAEIETLSPLRLPVIDKRLDLAYGDHELPTLVLDSI NFYERRCAAGAPGRLLPIAGHNHFSILAELRRADGALVRAARDLAGETGDDRTSALRSGAAFPE
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI192807282, Length=285, Percent_Identity=30.5263157894737, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI224465228, Length=290, Percent_Identity=30, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI19920830, Length=248, Percent_Identity=24.5967741935484, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32658; Mature: 32527
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHPNAPSANRPADPRDDWARLSRSERDAAYDNNTAVADSPALIAERNVASAQARATLRS CCCCCCCCCCCCCCCHHHHHHHHCHHCCCCCCCCCCCCCCCCHHECCCHHHHHHHHHHHH VLDLPYGPRTNNKIDLYPAADPDAPCLLFLHGGYWQKNSRELFAMMVEGVAAHGWSMAIP HHHCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECC GYSLAPEVSLTEIVDEVRQALDWLAAHAPDHGVAGPMITSGWSAGGHLVAMTLDHPLVAA CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCEEEEEEECCCHHHH GLSISGVFDLAPLRDTGLNDALKLTDAEIETLSPLRLPVIDKRLDLAYGDHELPTLVLDS CCCCCCEEECCCCCCCCCCCCEEECCCHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHH INFYERRCAAGAPGRLLPIAGHNHFSILAELRRADGALVRAARDLAGETGDDRTSALRSG HHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHCC AAFPE CCCCC >Mature Secondary Structure AHPNAPSANRPADPRDDWARLSRSERDAAYDNNTAVADSPALIAERNVASAQARATLRS CCCCCCCCCCCCCCHHHHHHHHCHHCCCCCCCCCCCCCCCCHHECCCHHHHHHHHHHHH VLDLPYGPRTNNKIDLYPAADPDAPCLLFLHGGYWQKNSRELFAMMVEGVAAHGWSMAIP HHHCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECC GYSLAPEVSLTEIVDEVRQALDWLAAHAPDHGVAGPMITSGWSAGGHLVAMTLDHPLVAA CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCEEEEEEECCCHHHH GLSISGVFDLAPLRDTGLNDALKLTDAEIETLSPLRLPVIDKRLDLAYGDHELPTLVLDS CCCCCCEEECCCCCCCCCCCCEEECCCHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHH INFYERRCAAGAPGRLLPIAGHNHFSILAELRRADGALVRAARDLAGETGDDRTSALRSG HHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHCC AAFPE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA