Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86748718

Identifier: 86748718

GI number: 86748718

Start: 1796259

End: 1796504

Strand: Reverse

Name: 86748718

Synonym: RPB_1593

Alternate gene names: NA

Gene position: 1796504-1796259 (Counterclockwise)

Preceding gene: 86748719

Following gene: 86748717

Centisome position: 33.7

GC content: 69.11

Gene sequence:

>246_bases
ATGGCGGTGCTGACGATCCGGAACATCGACGACGCGATCGAGCAGCGGCTTCGCGTCCGCGCCGCCGTCAATGGGCGCTC
GATGGAGGATGAGGCACGGGCGATCCTGCGCGCGGCGCTGTCGACCGACGCGCCGCGGGCACGCAATCTCGCGCAAGCCA
TCCATGAGCGGTTCGCGGCGCTCGGCGGAGTCCACCTCCCCGAAACGCGGCGCGAAGCGATCCTTCATGGTGGCATGGAT
CGCTGA

Upstream 100 bases:

>100_bases
CGGTGGGCCGCGCGAGGCGCGGCCCACCGGGCACCTCAGGATGACGCCGGTGATCCATCAAAACCAGAACTGCTCTAGTC
ATTCACAGTTGGAGGCTGGC

Downstream 100 bases:

>100_bases
GCGACCGATCGCCGGCTTTTTCACGACGAGTTTGACGCCGGCGGAGTTTGTAGGGTGGGCATAGCGCAGCGTGCCCACCA
TCGCCGATCCCCGCGCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MAVLTIRNIDDAIEQRLRVRAAVNGRSMEDEARAILRAALSTDAPRARNLAQAIHERFAALGGVHLPETRREAILHGGMD
R

Sequences:

>Translated_81_residues
MAVLTIRNIDDAIEQRLRVRAAVNGRSMEDEARAILRAALSTDAPRARNLAQAIHERFAALGGVHLPETRREAILHGGMD
R
>Mature_80_residues
AVLTIRNIDDAIEQRLRVRAAVNGRSMEDEARAILRAALSTDAPRARNLAQAIHERFAALGGVHLPETRREAILHGGMDR

Specific function: Unknown

COG id: COG4691

COG function: function code R; Plasmid stability protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8953; Mature: 8822

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLTIRNIDDAIEQRLRVRAAVNGRSMEDEARAILRAALSTDAPRARNLAQAIHERFAA
CCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LGGVHLPETRREAILHGGMDR
HCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
AVLTIRNIDDAIEQRLRVRAAVNGRSMEDEARAILRAALSTDAPRARNLAQAIHERFAA
CEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LGGVHLPETRREAILHGGMDR
HCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA