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The map label for this gene is yfhC [C]

Identifier: 86748295

GI number: 86748295

Start: 1343313

End: 1343759

Strand: Reverse

Name: yfhC [C]

Synonym: RPB_1170

Alternate gene names: 86748295

Gene position: 1343759-1343313 (Counterclockwise)

Preceding gene: 86748298

Following gene: 86748294

Centisome position: 25.2

GC content: 70.92

Gene sequence:

>447_bases
ATGACGACACCCTCCTTCATGGATCTGGCGCTGGCCGCCGCGCAAACCGCCGGGCAAGCCGGCGAAGTGCCGATCGGCTG
CGTCATCGTCCGCGCCGGCGCGGTGATCGCCAGCGCCGGCAACCGCACCCTGACCGACCGCGACCCCACCGCCCATGCCG
AGCTCCTGGCAATCCGCGAAGCCGCGCGAAAACTCGGCAGCGAGCGGCTGGTCGATTGCGATCTCTACGTCACGCTGGAG
CCGTGCACGATGTGCGCCGGCGCGATCTCGTTCGCGCGCATCCGCCGGCTGTATTTCGGCGCGTTCGATCCGAAGGGCGG
CGCGGTCGAGTCGGGCGTCCGCTTCTTCGGCCAGCCGACCTGCCACCACGCCCCGGAGATCTATTCCGGCGTCGGCGAAC
GCGAGGCCGCCGCGCTGCTGCGGGAGTTTTTCCGGGCGCGGCGGTGA

Upstream 100 bases:

>100_bases
GACGGGCGCTCTCGACGAAGGCGCATGGTCGACGCAAAACCGGCATCCACGTTTGCTGAATGGCGTCTCCTAGCAGAGTT
TTCGGGACGATACGAGCCAT

Downstream 100 bases:

>100_bases
AGGTGACGGCGACGTTTCGGCCCGATGGCGCCCCCGCGAGCGTCATCCTGAGGTGCTCGCCGTCTTCGGCGAGCCTCGAA
GGATGGCGCGTCACCGGCAC

Product: CMP/dCMP deaminase, zinc-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MTTPSFMDLALAAAQTAGQAGEVPIGCVIVRAGAVIASAGNRTLTDRDPTAHAELLAIREAARKLGSERLVDCDLYVTLE
PCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFFGQPTCHHAPEIYSGVGEREAAALLREFFRARR

Sequences:

>Translated_148_residues
MTTPSFMDLALAAAQTAGQAGEVPIGCVIVRAGAVIASAGNRTLTDRDPTAHAELLAIREAARKLGSERLVDCDLYVTLE
PCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFFGQPTCHHAPEIYSGVGEREAAALLREFFRARR
>Mature_147_residues
TTPSFMDLALAAAQTAGQAGEVPIGCVIVRAGAVIASAGNRTLTDRDPTAHAELLAIREAARKLGSERLVDCDLYVTLEP
CTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFFGQPTCHHAPEIYSGVGEREAAALLREFFRARR

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=151, Percent_Identity=29.1390728476821, Blast_Score=68, Evalue=3e-12,
Organism=Escherichia coli, GI145693172, Length=143, Percent_Identity=46.1538461538462, Blast_Score=124, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17541138, Length=146, Percent_Identity=34.9315068493151, Blast_Score=88, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17554608, Length=97, Percent_Identity=42.2680412371134, Blast_Score=84, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17555996, Length=79, Percent_Identity=41.7721518987342, Blast_Score=67, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6322425, Length=158, Percent_Identity=32.2784810126582, Blast_Score=66, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355527, Length=152, Percent_Identity=36.1842105263158, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 15815; Mature: 15684

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPSFMDLALAAAQTAGQAGEVPIGCVIVRAGAVIASAGNRTLTDRDPTAHAELLAIRE
CCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHH
AARKLGSERLVDCDLYVTLEPCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFFGQPT
HHHHCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
CHHAPEIYSGVGEREAAALLREFFRARR
CCCCCHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTPSFMDLALAAAQTAGQAGEVPIGCVIVRAGAVIASAGNRTLTDRDPTAHAELLAIRE
CCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHH
AARKLGSERLVDCDLYVTLEPCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFFGQPT
HHHHCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
CHHAPEIYSGVGEREAAALLREFFRARR
CCCCCHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA