| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is tynA [H]
Identifier: 86748258
GI number: 86748258
Start: 1302035
End: 1303993
Strand: Reverse
Name: tynA [H]
Synonym: RPB_1133
Alternate gene names: 86748258
Gene position: 1303993-1302035 (Counterclockwise)
Preceding gene: 86748260
Following gene: 86748257
Centisome position: 24.46
GC content: 64.37
Gene sequence:
>1959_bases ATGAGCCTCGCGGAAGACACCAGTTGCTGTCACGCGGCCGCAGCGGCTGAGGCCCCGGCCGTGCAGCATCCGCTGCAGCC TCTCACCCCGGCCGAAATCACCAGGGTCGCCGCCATCGTCAGCGCCGACCCGCCCTACGGCACCGATACCAGGTTCGAGA CCATCGAACTGCTGGAGCCGGAGAAGGCCGTCGTCCGTGCCTTCAAGCCGGGCATGCCGATCGCGCGCAACGCCCGCGTC AGCGTGTTCAGCACCATCCGCATCGGCGTGACGCGGCTGTTCGTCTCGCTCGACGCCGGCACGATCATGTCGCGCAAGGA ATTCCCGACCGCGCGGCCGATGATCCAGCTCGAGCAGTTTCTCGCCATCGAAGACTTCGTCCGCGCCCATCCCGAATTCA TCGCCGGCTGCGCGCGCCGCGGCATCACCGACATGACCACGGTGTGCGTCGACCCGTGGTCGGCGGGCAATTTCGGCATC CCCGGCGAGGACGGCCGGCATCTGTGCCACGTCTTCGCCTGGCAGCGGCTGCGCGAGAACGAGAATTTCTACGCCCATCC GATCGAAGGTCTCAACGCGGTGATCGACCTCAAGACCTGGGAAGTGATCCGCGTCGACGATTACGGCGTGGTCCCGATCC CGAAGATCGAAGCCAACTATGAGCGCGAGTTCATCGAGAGCAAGCGCGCGCCGCTGAAGCCGATCAACGTGACGCAGCCG CAGGGCGTCAGCTTCAAGATCGAAGGCCGGGCTCTCACCTGGGACAAATGGTCGTTCGTGATCGGCTTCAACGCCCGCGA GGCGCTGACGCTGCACGACATCAAATATGACGGCCGCCCGGTCGCGCATCGCGCCTCGCTGGTCGAGATGGTGGTGCCCT ATGGGAGCCCCGACAACGGCCATTTCCGCAAGAACGTGTTCGACATCGGCGAGTACGGCATCGGCAAGCTCGCCAATTCG CTGAAGCTCGGCTGCGACTGCCTCGGCGCCATCGAATATCTCGACGTTCATCTCAATACCATGAACGGCGACGTGATGAC GATCGAGAAGGCGATCTGCATCCACGAGGAGGATTCCGGCCTGCTGTGGAAGCACTGGGACTTCCGCACCGACCGCGCCG AGGTGCGGCGCGCGCGCAAGCTGGTGGTGTCGTCGATCTGCACTGTCGGCAATTACGAATACGCGCTGTATTGGTACTTC CACATCGACGGCGCGATCGAATTCGAGATGAAGGCGACCGGCATCATCAACACCGCGGCGTGTATTCCGGGCCAGCCCGG CAAATACGCCCGCGAAGTGCTGCCCGGCGTCGTCGGCCACATCCATCAGCATATCTTCTGCGCCCGTCTCGACATGGCGG TCGACGGCGACGCCAACAGCATCGTCGAGTGCAACACCTATGCGGAAGAGGAAGGCCCGCACAATCCGCACGGCAACGCC TTCTACGAGGCCGAAACGCTGCTCGGCAGCGAACTCTCGGCGGCGCGGCGCGCGAACCCGGCCTCGCATCGCTACTGGAA GGTGATCAATCCGAACAAACTGAACTACGCCGGCACGCCGGTCGGCTACAAGCTCGAGGCGATGAACTGTGTGACGCCGT TCGTCGGTGCGAACTCGCCCTCGGGCAAGCGGGCGGGCTTCGTTCAGAACCACGTCTGGGTGACGGCATTCGATCCCGAC GAACGCTATCCAGCCGGCGAATACATGAATCACTCGGACGGCAGCGGCGGGCTGCCCGACTTCATCAAGCAGGATCGTCC GCTGGAGAACGCCGACATCGTGCTGTGGCACGTGTTCGGCCTGCATCACCCGGTGCGGCTGGAGGATTTTCCGGTGCAGC CCTGCATCTCGACCGGCTTCAAGCTGGTGCCGCACGGCTTCTTCAACGGCAATCCCGGCATCGACCTGCCGCCGGAGGTC AACGCGGCGAGCTGCTGCGCCAACGCCACCACCGCCTGA
Upstream 100 bases:
>100_bases ATTGGCGCCTAATGTCAATCCTGCGGCGTTCGCCTTGAAGCAGCATGCCGCGCACCAGTGCGATCGACGAACCGCCGCAA CCAATCAGGGAGACGACATC
Downstream 100 bases:
>100_bases CTCGACGCCCCCGGCCGCCGGCGAAGCCCGGCGGCCGCACGGCGCGGTTCAGGCCGCGCCGCCCACGGCACGGCTGCGGC CGATCCAGTTTAACTTTTGA
Product: tyramine oxidase
Products: NA
Alternate protein names: Copper amine oxidase; MAOXI [H]
Number of amino acids: Translated: 652; Mature: 651
Protein sequence:
>652_residues MSLAEDTSCCHAAAAAEAPAVQHPLQPLTPAEITRVAAIVSADPPYGTDTRFETIELLEPEKAVVRAFKPGMPIARNARV SVFSTIRIGVTRLFVSLDAGTIMSRKEFPTARPMIQLEQFLAIEDFVRAHPEFIAGCARRGITDMTTVCVDPWSAGNFGI PGEDGRHLCHVFAWQRLRENENFYAHPIEGLNAVIDLKTWEVIRVDDYGVVPIPKIEANYEREFIESKRAPLKPINVTQP QGVSFKIEGRALTWDKWSFVIGFNAREALTLHDIKYDGRPVAHRASLVEMVVPYGSPDNGHFRKNVFDIGEYGIGKLANS LKLGCDCLGAIEYLDVHLNTMNGDVMTIEKAICIHEEDSGLLWKHWDFRTDRAEVRRARKLVVSSICTVGNYEYALYWYF HIDGAIEFEMKATGIINTAACIPGQPGKYAREVLPGVVGHIHQHIFCARLDMAVDGDANSIVECNTYAEEEGPHNPHGNA FYEAETLLGSELSAARRANPASHRYWKVINPNKLNYAGTPVGYKLEAMNCVTPFVGANSPSGKRAGFVQNHVWVTAFDPD ERYPAGEYMNHSDGSGGLPDFIKQDRPLENADIVLWHVFGLHHPVRLEDFPVQPCISTGFKLVPHGFFNGNPGIDLPPEV NAASCCANATTA
Sequences:
>Translated_652_residues MSLAEDTSCCHAAAAAEAPAVQHPLQPLTPAEITRVAAIVSADPPYGTDTRFETIELLEPEKAVVRAFKPGMPIARNARV SVFSTIRIGVTRLFVSLDAGTIMSRKEFPTARPMIQLEQFLAIEDFVRAHPEFIAGCARRGITDMTTVCVDPWSAGNFGI PGEDGRHLCHVFAWQRLRENENFYAHPIEGLNAVIDLKTWEVIRVDDYGVVPIPKIEANYEREFIESKRAPLKPINVTQP QGVSFKIEGRALTWDKWSFVIGFNAREALTLHDIKYDGRPVAHRASLVEMVVPYGSPDNGHFRKNVFDIGEYGIGKLANS LKLGCDCLGAIEYLDVHLNTMNGDVMTIEKAICIHEEDSGLLWKHWDFRTDRAEVRRARKLVVSSICTVGNYEYALYWYF HIDGAIEFEMKATGIINTAACIPGQPGKYAREVLPGVVGHIHQHIFCARLDMAVDGDANSIVECNTYAEEEGPHNPHGNA FYEAETLLGSELSAARRANPASHRYWKVINPNKLNYAGTPVGYKLEAMNCVTPFVGANSPSGKRAGFVQNHVWVTAFDPD ERYPAGEYMNHSDGSGGLPDFIKQDRPLENADIVLWHVFGLHHPVRLEDFPVQPCISTGFKLVPHGFFNGNPGIDLPPEV NAASCCANATTA >Mature_651_residues SLAEDTSCCHAAAAAEAPAVQHPLQPLTPAEITRVAAIVSADPPYGTDTRFETIELLEPEKAVVRAFKPGMPIARNARVS VFSTIRIGVTRLFVSLDAGTIMSRKEFPTARPMIQLEQFLAIEDFVRAHPEFIAGCARRGITDMTTVCVDPWSAGNFGIP GEDGRHLCHVFAWQRLRENENFYAHPIEGLNAVIDLKTWEVIRVDDYGVVPIPKIEANYEREFIESKRAPLKPINVTQPQ GVSFKIEGRALTWDKWSFVIGFNAREALTLHDIKYDGRPVAHRASLVEMVVPYGSPDNGHFRKNVFDIGEYGIGKLANSL KLGCDCLGAIEYLDVHLNTMNGDVMTIEKAICIHEEDSGLLWKHWDFRTDRAEVRRARKLVVSSICTVGNYEYALYWYFH IDGAIEFEMKATGIINTAACIPGQPGKYAREVLPGVVGHIHQHIFCARLDMAVDGDANSIVECNTYAEEEGPHNPHGNAF YEAETLLGSELSAARRANPASHRYWKVINPNKLNYAGTPVGYKLEAMNCVTPFVGANSPSGKRAGFVQNHVWVTAFDPDE RYPAGEYMNHSDGSGGLPDFIKQDRPLENADIVLWHVFGLHHPVRLEDFPVQPCISTGFKLVPHGFFNGNPGIDLPPEVN AASCCANATTA
Specific function: The exact function of maoXI is not known [H]
COG id: COG3733
COG function: function code Q; Cu2+-containing amine oxidase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the copper/topaquinone oxidase family [H]
Homologues:
Organism=Homo sapiens, GI60498984, Length=519, Percent_Identity=25.626204238921, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI60498982, Length=517, Percent_Identity=25.7253384912959, Blast_Score=130, Evalue=4e-30, Organism=Homo sapiens, GI4502119, Length=404, Percent_Identity=26.980198019802, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI73486661, Length=488, Percent_Identity=24.3852459016393, Blast_Score=115, Evalue=1e-25, Organism=Escherichia coli, GI1787651, Length=642, Percent_Identity=30.5295950155763, Blast_Score=303, Evalue=2e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000269 - InterPro: IPR015798 - InterPro: IPR016182 - InterPro: IPR015800 - InterPro: IPR015801 - InterPro: IPR015802 [H]
Pfam domain/function: PF01179 Cu_amine_oxid; PF02727 Cu_amine_oxidN2; PF02728 Cu_amine_oxidN3 [H]
EC number: =1.4.3.21 [H]
Molecular weight: Translated: 72207; Mature: 72075
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS01164 COPPER_AMINE_OXID_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAEDTSCCHAAAAAEAPAVQHPLQPLTPAEITRVAAIVSADPPYGTDTRFETIELLEP CCCCCCCCHHHHHHHCCCCHHHCCCCCCCHHHHHHEEHEEECCCCCCCCCCCEEEEECCC EKAVVRAFKPGMPIARNARVSVFSTIRIGVTRLFVSLDAGTIMSRKEFPTARPMIQLEQF HHHHHHHHCCCCCCCCCCEEEEEHHHHHEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHH LAIEDFVRAHPEFIAGCARRGITDMTTVCVDPWSAGNFGIPGEDGRHLCHVFAWQRLREN HHHHHHHHHCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCC ENFYAHPIEGLNAVIDLKTWEVIRVDDYGVVPIPKIEANYEREFIESKRAPLKPINVTQP CCEEECCCCCCCEEEEECEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC QGVSFKIEGRALTWDKWSFVIGFNAREALTLHDIKYDGRPVAHRASLVEMVVPYGSPDNG CCCEEEECCCEEEEECEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHEECCCCCCCC HFRKNVFDIGEYGIGKLANSLKLGCDCLGAIEYLDVHLNTMNGDVMTIEKAICIHEEDSG CHHCCHHHHCCCCHHHHHHHHHHCHHHHHHEEEEEEEEEECCCCEEEEEEEEEEEECCCC LLWKHWDFRTDRAEVRRARKLVVSSICTVGNYEYALYWYFHIDGAIEFEMKATGIINTAA CEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCEEEEEEEECCEEEEHC CIPGQPGKYAREVLPGVVGHIHQHIFCARLDMAVDGDANSIVECNTYAEEEGPHNPHGNA CCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCE FYEAETLLGSELSAARRANPASHRYWKVINPNKLNYAGTPVGYKLEAMNCVTPFVGANSP EEEHHHHHCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEHHCCCCCCCCCC SGKRAGFVQNHVWVTAFDPDERYPAGEYMNHSDGSGGLPDFIKQDRPLENADIVLWHVFG CCCCCCEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEEC LHHPVRLEDFPVQPCISTGFKLVPHGFFNGNPGIDLPPEVNAASCCANATTA CCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure SLAEDTSCCHAAAAAEAPAVQHPLQPLTPAEITRVAAIVSADPPYGTDTRFETIELLEP CCCCCCCHHHHHHHCCCCHHHCCCCCCCHHHHHHEEHEEECCCCCCCCCCCEEEEECCC EKAVVRAFKPGMPIARNARVSVFSTIRIGVTRLFVSLDAGTIMSRKEFPTARPMIQLEQF HHHHHHHHCCCCCCCCCCEEEEEHHHHHEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHH LAIEDFVRAHPEFIAGCARRGITDMTTVCVDPWSAGNFGIPGEDGRHLCHVFAWQRLREN HHHHHHHHHCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCC ENFYAHPIEGLNAVIDLKTWEVIRVDDYGVVPIPKIEANYEREFIESKRAPLKPINVTQP CCEEECCCCCCCEEEEECEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC QGVSFKIEGRALTWDKWSFVIGFNAREALTLHDIKYDGRPVAHRASLVEMVVPYGSPDNG CCCEEEECCCEEEEECEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHEECCCCCCCC HFRKNVFDIGEYGIGKLANSLKLGCDCLGAIEYLDVHLNTMNGDVMTIEKAICIHEEDSG CHHCCHHHHCCCCHHHHHHHHHHCHHHHHHEEEEEEEEEECCCCEEEEEEEEEEEECCCC LLWKHWDFRTDRAEVRRARKLVVSSICTVGNYEYALYWYFHIDGAIEFEMKATGIINTAA CEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCEEEEEEEECCEEEEHC CIPGQPGKYAREVLPGVVGHIHQHIFCARLDMAVDGDANSIVECNTYAEEEGPHNPHGNA CCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCE FYEAETLLGSELSAARRANPASHRYWKVINPNKLNYAGTPVGYKLEAMNCVTPFVGANSP EEEHHHHHCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEHHCCCCCCCCCC SGKRAGFVQNHVWVTAFDPDERYPAGEYMNHSDGSGGLPDFIKQDRPLENADIVLWHVFG CCCCCCEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEEC LHHPVRLEDFPVQPCISTGFKLVPHGFFNGNPGIDLPPEVNAASCCANATTA CCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8366046 [H]