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The map label for this gene is 86748236

Identifier: 86748236

GI number: 86748236

Start: 1279979

End: 1282684

Strand: Reverse

Name: 86748236

Synonym: RPB_1111

Alternate gene names: NA

Gene position: 1282684-1279979 (Counterclockwise)

Preceding gene: 86748237

Following gene: 86748235

Centisome position: 24.06

GC content: 69.88

Gene sequence:

>2706_bases
ATGTTCGAACTGCTGACGCTCGTGATCGCCCTCGTCGCGCTGGTGCTGGCGCGCAAGGCGAACAACCGCTCCCAGGAATT
GCAGGCGAGGCTCGCCGCGCTCGAAGCGGGACAGCCGCTGACGGCGCGTGCGCAGCCCGCGGCGACCGCGGCGAGTGGTA
GCGCCGTCGCGGAGGCATCGCTCGCACCCGAGCTTCAGCCGGAAGTCGCCGAGGCGGGGGCGGCCGAGGCGGCGACGGAA
TCGGCATCCGCCGGGAGCGCCGCGTCGGCAGACGCATCGATCGATACGTCCGCGCCGGCCGAACCGCCGGCTGCACCATC
AGCCAAGCCCGGCTTCGAAGAGCGCATCGGCACCCGCTGGGTGGTGTGGGTCGGCGGGCTGACGCTGGCGCTCGGCGGCT
TCTTCATGGTGCGTTACTCGATCGAACAGGGTCTGCTCGGCCCCGGCGTGCGCGTGTTGCTCGGCGGCCTGTTCGCACTG
GCGCTGCTCGGCGCCGGTGAATGGACGCGACGCAAGGAGGACATCTCGAACCTGCGCGCGCTGCCGATCGCCAACATCCC
CGCGATCCTCACCGCGGCTGGCACCGCCGTGGCATTCGCGACCGTCTACGCATCCTATGCCCTGTACGACTTTCTCGCTC
CCGCCAGCGCCTTCATATTGCTCGGGCTGGTCGCGCTCGGCACGCTGGCTGCGGCGTTGCTGCACGGCCCGGCGCTGGCA
GGGCTCGGCGTCGTCGCCGGCTTCGTCACGCCGCTGCTGGTGTCGTCGGAGACGCCCGACTATTGGGCGCTGTACATCTA
TCTCGCGGTGGTGACCGCGGCGTCGTACGGCCTCGCGCGAATCCGGCTGTGGCGCTGGCTCGCCATGACCACGATCGCGC
TGGCGTTCCTCTGGGCGGTGGCCGGACTCGCAGGAGCGTCGCTGGGGCCGCTCGCGTTCCACGTCATCGCCGGCTTCGTG
CTCGCCGCACTGCTCGTTGTCTGCAACTTGCTGTTCGGCCCGTCGCTCGAGGACGGCCGAATCGAGACGATCTCGTCCGC
CTCGCTCGCCGCGCCCGTGCTCGCGGCCGCGCTGATCGTCGTCGGCGAGGGCCATACCGACTCGGCGATGATCGTGTTCG
CGCTGCTGGTCGCGGCGACGCTCGGCGTGGCGTGGCGCGCAGCGGCGGCGACTGCGGCCGTCGGCGCCGCCGCGGTGCTG
GTCGCGCTGGTGTTTCTCTCGTGGGTGATCCGCAGCGCGCCCGAATTACTTGCGTTGCCCGGCGGACCGCTGCCCGGAAT
CGGCACCGATCCGCTTGCCGGCTCGGTGACGACACACCTGATCACGGCTGCGATCTTTGCGCTCGGCTTCGGCGTCGCCG
GGCTGCTGGCACAGGGGCGATCGACCAGTGCGATCGTCCCGGTGATCTGGTCGGCTGCGGGGGTGTTCACGCCGCTGGCG
TTGCTGATCGCGCTGTATGCGCGGATCGCCCATCTCGATCGCTCGATCCCGTTTGCCATTGTCGCGGTACTCCTCGCCGC
GGCTTACGGCGCCGCCACCGAATGGCTGAGCAAGCGCGAGACCCGGCCCGGGCTCGCGATCTCGGCGGCGCTGTACGCCA
CCGGCACGCTCGGCGCGCTGGCGCTGGCGCTGACCTTCGCGTTGGAGAAGGGCTGGCTGACGATCGCGCTGGCGCTGATG
GCGGCCGGCACGGCCTGGATCTCGCTGCAGCGGCCGATTCCGTTCCTGCGCTGGCTCGCCGCGATCCTCGCTGGCATCGT
CGTGCTGCGAGCCGGCTGGGAGCCGCGCATCGTCGGAGACGCGATCGGCACCACGCCGATCTTCAACTGGCTGCTGTGGG
GCTATGGCGTGCCGGCGGCATCGTTCTGGCTCGCCAGCTTCTGGCTTCGCAAGCGCGGCGACGACGTGCCGCTGCGCATG
ATGGAGTCCGCAGCGATCCTGTTCACCGTGCTGCTGGCATTCCTGCAGATCCGCCACGCCGTCAACAACGGCGATGTCTA
TCGCGACAGCGCCGGGCTGGTCGAGGTCGCCCTGCAGGTCTGCGTCGCGCTGGCGATGGCGATCGGCCTCGAACGGCTGC
GGCGACGCAGCCGCAGCGTCGTTCACAACGTCGCGGCGATCCTGCTCGCGGTGTTCGCCGCACTCGCCAGCATCGGCGGC
CTGCTGCTGTTCGAAAATCCTCTGTTGTGGTGGTCCGGCGAAATCGGCGGCCTGCTGCTGAACGAGCTGCTGCTCGGCTA
TGCGGCTCCGGCGCTGCTGGCGCTGCTGCTGTCCTACGCGGTCGCGGGGCTGCGCCGACCGTCCTATGCCAACAGCTTCG
CGGCGCTCGCGCTGATGATGGGGCTGGCCTATGTGACGCTGGAAATCCGTCGGCTGTATCACGGCCCCGTGCTGTGGCGC
GGCCTCACCACCGATGCCGAGCAGTACACCTATTCGCTGGCCTGGCTCGGCTGCGGCGTGCTGCTGCTCGGCGCCGGCAT
CCTGTTCAACTCGCAGCGCGCCCGGCTCGCCTCCGCGGTGGTGATCGGCCTCACCATCGTCAAAGCCTTCCTGATCGACA
TGTCGACGCTGACCGGCGTGTACCGGGCGCTGTCGTTCATGGGGCTCGGCCTGGTGCTGGTCGCGATCGGCTGGCTGTAT
CAGCGCGTCTTGTTTCGGCCGCGTGCTCTGCCATCCGGTGCAGCGGCCAGCGACGCGAAGGATTAG

Upstream 100 bases:

>100_bases
GCAGGAGCGCCCCGCGCCCGGCCTGCGCGTGCGCGGTCGGCGCTGAATTTGTCCTAGGAAGCGAAGCGCCCTCGATCCGG
GCCGGTCGCCTGGAGCTGTG

Downstream 100 bases:

>100_bases
TCCGCATCCTCGACGGCGGCGGGCGCTCGCGAACGCCGCGGCGACGCTCGACGAATACGCGAAAGTGTTCGCGACTTCGC
GTACACCGATTCTAATCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 901; Mature: 901

Protein sequence:

>901_residues
MFELLTLVIALVALVLARKANNRSQELQARLAALEAGQPLTARAQPAATAASGSAVAEASLAPELQPEVAEAGAAEAATE
SASAGSAASADASIDTSAPAEPPAAPSAKPGFEERIGTRWVVWVGGLTLALGGFFMVRYSIEQGLLGPGVRVLLGGLFAL
ALLGAGEWTRRKEDISNLRALPIANIPAILTAAGTAVAFATVYASYALYDFLAPASAFILLGLVALGTLAAALLHGPALA
GLGVVAGFVTPLLVSSETPDYWALYIYLAVVTAASYGLARIRLWRWLAMTTIALAFLWAVAGLAGASLGPLAFHVIAGFV
LAALLVVCNLLFGPSLEDGRIETISSASLAAPVLAAALIVVGEGHTDSAMIVFALLVAATLGVAWRAAAATAAVGAAAVL
VALVFLSWVIRSAPELLALPGGPLPGIGTDPLAGSVTTHLITAAIFALGFGVAGLLAQGRSTSAIVPVIWSAAGVFTPLA
LLIALYARIAHLDRSIPFAIVAVLLAAAYGAATEWLSKRETRPGLAISAALYATGTLGALALALTFALEKGWLTIALALM
AAGTAWISLQRPIPFLRWLAAILAGIVVLRAGWEPRIVGDAIGTTPIFNWLLWGYGVPAASFWLASFWLRKRGDDVPLRM
MESAAILFTVLLAFLQIRHAVNNGDVYRDSAGLVEVALQVCVALAMAIGLERLRRRSRSVVHNVAAILLAVFAALASIGG
LLLFENPLLWWSGEIGGLLLNELLLGYAAPALLALLLSYAVAGLRRPSYANSFAALALMMGLAYVTLEIRRLYHGPVLWR
GLTTDAEQYTYSLAWLGCGVLLLGAGILFNSQRARLASAVVIGLTIVKAFLIDMSTLTGVYRALSFMGLGLVLVAIGWLY
QRVLFRPRALPSGAAASDAKD

Sequences:

>Translated_901_residues
MFELLTLVIALVALVLARKANNRSQELQARLAALEAGQPLTARAQPAATAASGSAVAEASLAPELQPEVAEAGAAEAATE
SASAGSAASADASIDTSAPAEPPAAPSAKPGFEERIGTRWVVWVGGLTLALGGFFMVRYSIEQGLLGPGVRVLLGGLFAL
ALLGAGEWTRRKEDISNLRALPIANIPAILTAAGTAVAFATVYASYALYDFLAPASAFILLGLVALGTLAAALLHGPALA
GLGVVAGFVTPLLVSSETPDYWALYIYLAVVTAASYGLARIRLWRWLAMTTIALAFLWAVAGLAGASLGPLAFHVIAGFV
LAALLVVCNLLFGPSLEDGRIETISSASLAAPVLAAALIVVGEGHTDSAMIVFALLVAATLGVAWRAAAATAAVGAAAVL
VALVFLSWVIRSAPELLALPGGPLPGIGTDPLAGSVTTHLITAAIFALGFGVAGLLAQGRSTSAIVPVIWSAAGVFTPLA
LLIALYARIAHLDRSIPFAIVAVLLAAAYGAATEWLSKRETRPGLAISAALYATGTLGALALALTFALEKGWLTIALALM
AAGTAWISLQRPIPFLRWLAAILAGIVVLRAGWEPRIVGDAIGTTPIFNWLLWGYGVPAASFWLASFWLRKRGDDVPLRM
MESAAILFTVLLAFLQIRHAVNNGDVYRDSAGLVEVALQVCVALAMAIGLERLRRRSRSVVHNVAAILLAVFAALASIGG
LLLFENPLLWWSGEIGGLLLNELLLGYAAPALLALLLSYAVAGLRRPSYANSFAALALMMGLAYVTLEIRRLYHGPVLWR
GLTTDAEQYTYSLAWLGCGVLLLGAGILFNSQRARLASAVVIGLTIVKAFLIDMSTLTGVYRALSFMGLGLVLVAIGWLY
QRVLFRPRALPSGAAASDAKD
>Mature_901_residues
MFELLTLVIALVALVLARKANNRSQELQARLAALEAGQPLTARAQPAATAASGSAVAEASLAPELQPEVAEAGAAEAATE
SASAGSAASADASIDTSAPAEPPAAPSAKPGFEERIGTRWVVWVGGLTLALGGFFMVRYSIEQGLLGPGVRVLLGGLFAL
ALLGAGEWTRRKEDISNLRALPIANIPAILTAAGTAVAFATVYASYALYDFLAPASAFILLGLVALGTLAAALLHGPALA
GLGVVAGFVTPLLVSSETPDYWALYIYLAVVTAASYGLARIRLWRWLAMTTIALAFLWAVAGLAGASLGPLAFHVIAGFV
LAALLVVCNLLFGPSLEDGRIETISSASLAAPVLAAALIVVGEGHTDSAMIVFALLVAATLGVAWRAAAATAAVGAAAVL
VALVFLSWVIRSAPELLALPGGPLPGIGTDPLAGSVTTHLITAAIFALGFGVAGLLAQGRSTSAIVPVIWSAAGVFTPLA
LLIALYARIAHLDRSIPFAIVAVLLAAAYGAATEWLSKRETRPGLAISAALYATGTLGALALALTFALEKGWLTIALALM
AAGTAWISLQRPIPFLRWLAAILAGIVVLRAGWEPRIVGDAIGTTPIFNWLLWGYGVPAASFWLASFWLRKRGDDVPLRM
MESAAILFTVLLAFLQIRHAVNNGDVYRDSAGLVEVALQVCVALAMAIGLERLRRRSRSVVHNVAAILLAVFAALASIGG
LLLFENPLLWWSGEIGGLLLNELLLGYAAPALLALLLSYAVAGLRRPSYANSFAALALMMGLAYVTLEIRRLYHGPVLWR
GLTTDAEQYTYSLAWLGCGVLLLGAGILFNSQRARLASAVVIGLTIVKAFLIDMSTLTGVYRALSFMGLGLVLVAIGWLY
QRVLFRPRALPSGAAASDAKD

Specific function: Unknown

COG id: COG5373

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 93637; Mature: 93637

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFELLTLVIALVALVLARKANNRSQELQARLAALEAGQPLTARAQPAATAASGSAVAEAS
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCHHHHHH
LAPELQPEVAEAGAAEAATESASAGSAASADASIDTSAPAEPPAAPSAKPGFEERIGTRW
CCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEE
VVWVGGLTLALGGFFMVRYSIEQGLLGPGVRVLLGGLFALALLGAGEWTRRKEDISNLRA
EEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
LPIANIPAILTAAGTAVAFATVYASYALYDFLAPASAFILLGLVALGTLAAALLHGPALA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGVVAGFVTPLLVSSETPDYWALYIYLAVVTAASYGLARIRLWRWLAMTTIALAFLWAV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLAGASLGPLAFHVIAGFVLAALLVVCNLLFGPSLEDGRIETISSASLAAPVLAAALIV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VGEGHTDSAMIVFALLVAATLGVAWRAAAATAAVGAAAVLVALVFLSWVIRSAPELLALP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
GGPLPGIGTDPLAGSVTTHLITAAIFALGFGVAGLLAQGRSTSAIVPVIWSAAGVFTPLA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LLIALYARIAHLDRSIPFAIVAVLLAAAYGAATEWLSKRETRPGLAISAALYATGTLGAL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
ALALTFALEKGWLTIALALMAAGTAWISLQRPIPFLRWLAAILAGIVVLRAGWEPRIVGD
HHHHHHHHHCCHHHHHHHHHHCCHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEECC
AIGTTPIFNWLLWGYGVPAASFWLASFWLRKRGDDVPLRMMESAAILFTVLLAFLQIRHA
HHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VNNGDVYRDSAGLVEVALQVCVALAMAIGLERLRRRSRSVVHNVAAILLAVFAALASIGG
HCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LLLFENPLLWWSGEIGGLLLNELLLGYAAPALLALLLSYAVAGLRRPSYANSFAALALMM
CCEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
GLAYVTLEIRRLYHGPVLWRGLTTDAEQYTYSLAWLGCGVLLLGAGILFNSQRARLASAV
HHHHHHHHHHHHHCCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VIGLTIVKAFLIDMSTLTGVYRALSFMGLGLVLVAIGWLYQRVLFRPRALPSGAAASDAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
D
C
>Mature Secondary Structure
MFELLTLVIALVALVLARKANNRSQELQARLAALEAGQPLTARAQPAATAASGSAVAEAS
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCHHHHHH
LAPELQPEVAEAGAAEAATESASAGSAASADASIDTSAPAEPPAAPSAKPGFEERIGTRW
CCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEE
VVWVGGLTLALGGFFMVRYSIEQGLLGPGVRVLLGGLFALALLGAGEWTRRKEDISNLRA
EEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
LPIANIPAILTAAGTAVAFATVYASYALYDFLAPASAFILLGLVALGTLAAALLHGPALA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGVVAGFVTPLLVSSETPDYWALYIYLAVVTAASYGLARIRLWRWLAMTTIALAFLWAV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLAGASLGPLAFHVIAGFVLAALLVVCNLLFGPSLEDGRIETISSASLAAPVLAAALIV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VGEGHTDSAMIVFALLVAATLGVAWRAAAATAAVGAAAVLVALVFLSWVIRSAPELLALP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
GGPLPGIGTDPLAGSVTTHLITAAIFALGFGVAGLLAQGRSTSAIVPVIWSAAGVFTPLA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LLIALYARIAHLDRSIPFAIVAVLLAAAYGAATEWLSKRETRPGLAISAALYATGTLGAL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
ALALTFALEKGWLTIALALMAAGTAWISLQRPIPFLRWLAAILAGIVVLRAGWEPRIVGD
HHHHHHHHHCCHHHHHHHHHHCCHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEECC
AIGTTPIFNWLLWGYGVPAASFWLASFWLRKRGDDVPLRMMESAAILFTVLLAFLQIRHA
HHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VNNGDVYRDSAGLVEVALQVCVALAMAIGLERLRRRSRSVVHNVAAILLAVFAALASIGG
HCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LLLFENPLLWWSGEIGGLLLNELLLGYAAPALLALLLSYAVAGLRRPSYANSFAALALMM
CCEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
GLAYVTLEIRRLYHGPVLWRGLTTDAEQYTYSLAWLGCGVLLLGAGILFNSQRARLASAV
HHHHHHHHHHHHHCCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VIGLTIVKAFLIDMSTLTGVYRALSFMGLGLVLVAIGWLYQRVLFRPRALPSGAAASDAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA