| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cusB [H]
Identifier: 86748227
GI number: 86748227
Start: 1265108
End: 1266520
Strand: Direct
Name: cusB [H]
Synonym: RPB_1102
Alternate gene names: 86748227
Gene position: 1265108-1266520 (Clockwise)
Preceding gene: 86748226
Following gene: 86748228
Centisome position: 23.73
GC content: 66.17
Gene sequence:
>1413_bases GTGACGCGCACTGCTCTCGCGAGCCTGGCCGTCGCCGCTTTGGCGGCTGCGGGAGGCGGCCTGTACGGTGTCCGCGAGCA CCTTCATGCGAGCACCGCGCAGGGCATCGCGTTGTTTGCTCCGGCGCAGGCGCAAAGCAATGACGAGCCGATCTACTATC AGGATCCGGACGGCAAGCCGTCCTATTCGCTGACACCGCGCAAGACCGCCGACGGGCGCGACTATCGCGCCGTGCCGGCC GGCGCCGATCTGAATTTCGGCGACGACGCGCCCGTCGCGCCGCCGATGGTGGTTGCGACGGATCGCAAGATCAAATTCTA TCGCAATCCGATGGGCCTCGCCGACACCTCGCCGGTGCCGAAGAAGGATTCGATGGGGATGGACTACATCCCGGTCTACG AGGTCGACGGCAGCGACGATGGATCGGTGAAATTGTCGCCAGGGAAGATTCAGCGCACCGGTGTCAAATCGGAAGCCGCC GGCCGGCGCGTGATCCGCACCACGATCCGCGCGCCGGGCGTGATCCAGCTCGACGAACGCCGAGTCTCGGTGATCGCGAT GCGCTCGGAAAGCTTCGTGCAGAAGATCGCCGACGTCACCACCGGCAGCCGCGTCACCAAGGACCAGGCCTTGATGGAGG TCTACAGCTCCGCGATCTCGGCTGCGGCGGCCGACTATATCGCCACCATCAATTCGAAGACCACCGGCGGCGTCGCTGCC TATGGGCGTGGCTCGCGGCAGCGGCTGATGAATCTCGATGTGCCGGACGCTGCGATTGCCTCGATGGAAAAGGCCGGCAC GGTGCCGATCGCGCTGGAATGGACGGCGCCGCGCGACGGCGTCGTGCTGGAACGCAACGCCATCGAGGGCATGCGGGCGC AGCCCGGCGATGTGTTGTTCCGGATCGCCGATACATCCGTGGTGTGGGCGACGCTCGACGTGTCCGAGCGCGATCTCGGC GCGCTGGCGCCGGGCCAGCCCGTGGTCGTTCGCGCCCGCAGCTATCCAGGGCGCGACTTCACCGGCGAGGTGAAACTGAT CTATCCGCAGATCGGCAAGGAGACGCGCACGGCGCGCGTCCGGGTCGAACTGGCCAATGCCGATCTGGTTTTGCTACCCG ACATGTATGTCGATGCCGAGATCGACACCGGCGGCTCTCAGCCGGTGCTGGCGGTGCCGGACAGCTCCATACTGGATTCC GGCAGCAAGCAGGTGGTGTTCGTCGACCAGGGCGAAGGGCGCTACCAGCCGCGGAGCGTCAAACCCGGCCGTCGCGGAGG GGATGACGTCGAAATCCGCGAAGGTCTGGCCGAAGGCGAGCGGGTCGTGGTGTCGGCCAACTTCCTGATCGACGCGGAGA GCAATTTGAATGCCGCGCTGAAGAGCTTCTCGGACGCCGGAGCCAAGCCATGA
Upstream 100 bases:
>100_bases CGGCGTTCGGCATGGAAGGCCGCTGGCTGTTGTCGCTCGGCGCCAAGGTGCAGGGCGAGACCGGTTCGGTCGAAGGCAAG CTCGTCATCACGGCGAACAA
Downstream 100 bases:
>100_bases TCGCCCGTCTGATCGCCTGGTCGGCACGCAATCTGCTGCTGGTGCTGTTCGGCGCCGGCTTCGCCGCCGCGGCCGGAGTC TATGCGCTGAAACACCTGCC
Product: secretion protein HlyD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MTRTALASLAVAALAAAGGGLYGVREHLHASTAQGIALFAPAQAQSNDEPIYYQDPDGKPSYSLTPRKTADGRDYRAVPA GADLNFGDDAPVAPPMVVATDRKIKFYRNPMGLADTSPVPKKDSMGMDYIPVYEVDGSDDGSVKLSPGKIQRTGVKSEAA GRRVIRTTIRAPGVIQLDERRVSVIAMRSESFVQKIADVTTGSRVTKDQALMEVYSSAISAAAADYIATINSKTTGGVAA YGRGSRQRLMNLDVPDAAIASMEKAGTVPIALEWTAPRDGVVLERNAIEGMRAQPGDVLFRIADTSVVWATLDVSERDLG ALAPGQPVVVRARSYPGRDFTGEVKLIYPQIGKETRTARVRVELANADLVLLPDMYVDAEIDTGGSQPVLAVPDSSILDS GSKQVVFVDQGEGRYQPRSVKPGRRGGDDVEIREGLAEGERVVVSANFLIDAESNLNAALKSFSDAGAKP
Sequences:
>Translated_470_residues MTRTALASLAVAALAAAGGGLYGVREHLHASTAQGIALFAPAQAQSNDEPIYYQDPDGKPSYSLTPRKTADGRDYRAVPA GADLNFGDDAPVAPPMVVATDRKIKFYRNPMGLADTSPVPKKDSMGMDYIPVYEVDGSDDGSVKLSPGKIQRTGVKSEAA GRRVIRTTIRAPGVIQLDERRVSVIAMRSESFVQKIADVTTGSRVTKDQALMEVYSSAISAAAADYIATINSKTTGGVAA YGRGSRQRLMNLDVPDAAIASMEKAGTVPIALEWTAPRDGVVLERNAIEGMRAQPGDVLFRIADTSVVWATLDVSERDLG ALAPGQPVVVRARSYPGRDFTGEVKLIYPQIGKETRTARVRVELANADLVLLPDMYVDAEIDTGGSQPVLAVPDSSILDS GSKQVVFVDQGEGRYQPRSVKPGRRGGDDVEIREGLAEGERVVVSANFLIDAESNLNAALKSFSDAGAKP >Mature_469_residues TRTALASLAVAALAAAGGGLYGVREHLHASTAQGIALFAPAQAQSNDEPIYYQDPDGKPSYSLTPRKTADGRDYRAVPAG ADLNFGDDAPVAPPMVVATDRKIKFYRNPMGLADTSPVPKKDSMGMDYIPVYEVDGSDDGSVKLSPGKIQRTGVKSEAAG RRVIRTTIRAPGVIQLDERRVSVIAMRSESFVQKIADVTTGSRVTKDQALMEVYSSAISAAAADYIATINSKTTGGVAAY GRGSRQRLMNLDVPDAAIASMEKAGTVPIALEWTAPRDGVVLERNAIEGMRAQPGDVLFRIADTSVVWATLDVSERDLGA LAPGQPVVVRARSYPGRDFTGEVKLIYPQIGKETRTARVRVELANADLVLLPDMYVDAEIDTGGSQPVLAVPDSSILDSG SKQVVFVDQGEGRYQPRSVKPGRRGGDDVEIREGLAEGERVVVSANFLIDAESNLNAALKSFSDAGAKP
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786787, Length=362, Percent_Identity=28.1767955801105, Blast_Score=146, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49950; Mature: 49819
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTALASLAVAALAAAGGGLYGVREHLHASTAQGIALFAPAQAQSNDEPIYYQDPDGKP CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCC SYSLTPRKTADGRDYRAVPAGADLNFGDDAPVAPPMVVATDRKIKFYRNPMGLADTSPVP CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCC KKDSMGMDYIPVYEVDGSDDGSVKLSPGKIQRTGVKSEAAGRRVIRTTIRAPGVIQLDER CCCCCCCCEEEEEEECCCCCCEEEECCCCEEECCCCCHHHCCCEEHHHHCCCCEEEECCC RVSVIAMRSESFVQKIADVTTGSRVTKDQALMEVYSSAISAAAADYIATINSKTTGGVAA EEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEE YGRGSRQRLMNLDVPDAAIASMEKAGTVPIALEWTAPRDGVVLERNAIEGMRAQPGDVLF CCCCCHHHEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCEEE RIADTSVVWATLDVSERDLGALAPGQPVVVRARSYPGRDFTGEVKLIYPQIGKETRTARV EEECCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEE RVELANADLVLLPDMYVDAEIDTGGSQPVLAVPDSSILDSGSKQVVFVDQGEGRYQPRSV EEEEECCCEEEECCEEEEEEECCCCCCCEEECCCCHHHCCCCCEEEEEECCCCCCCCCCC KPGRRGGDDVEIREGLAEGERVVVSANFLIDAESNLNAALKSFSDAGAKP CCCCCCCCCHHHHHHCCCCCEEEEEEEEEEECCCCHHHHHHHHHHCCCCC >Mature Secondary Structure TRTALASLAVAALAAAGGGLYGVREHLHASTAQGIALFAPAQAQSNDEPIYYQDPDGKP CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCC SYSLTPRKTADGRDYRAVPAGADLNFGDDAPVAPPMVVATDRKIKFYRNPMGLADTSPVP CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCC KKDSMGMDYIPVYEVDGSDDGSVKLSPGKIQRTGVKSEAAGRRVIRTTIRAPGVIQLDER CCCCCCCCEEEEEEECCCCCCEEEECCCCEEECCCCCHHHCCCEEHHHHCCCCEEEECCC RVSVIAMRSESFVQKIADVTTGSRVTKDQALMEVYSSAISAAAADYIATINSKTTGGVAA EEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEE YGRGSRQRLMNLDVPDAAIASMEKAGTVPIALEWTAPRDGVVLERNAIEGMRAQPGDVLF CCCCCHHHEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCEEE RIADTSVVWATLDVSERDLGALAPGQPVVVRARSYPGRDFTGEVKLIYPQIGKETRTARV EEECCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEE RVELANADLVLLPDMYVDAEIDTGGSQPVLAVPDSSILDSGSKQVVFVDQGEGRYQPRSV EEEEECCCEEEECCEEEEEEECCCCCCCEEECCCCHHHCCCCCEEEEEECCCCCCCCCCC KPGRRGGDDVEIREGLAEGERVVVSANFLIDAESNLNAALKSFSDAGAKP CCCCCCCCCHHHHHHCCCCCEEEEEEEEEEECCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]