| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748193
Identifier: 86748193
GI number: 86748193
Start: 1227817
End: 1228491
Strand: Reverse
Name: 86748193
Synonym: RPB_1068
Alternate gene names: NA
Gene position: 1228491-1227817 (Counterclockwise)
Preceding gene: 86748194
Following gene: 86748192
Centisome position: 23.04
GC content: 64.59
Gene sequence:
>675_bases ATGATCACGCGCCGCACCTTCACCGCCGCTCTGTCGCTGACCGGTCTCGCCGCCGTCGCCGGCGTCTCGCCGTTCCGCCT GATCGGCGACGCCTTCGCCCAGAGCAGCGCTGCCGCGACCGCCGCCGACGTCGCCAAGCCGATGTCGCTGCCCGACATGG CGCTCGGCCCCAAGGACGCCGCCGTCACCATCACCGAATACGCCTCGATGACCTGCTCGCACTGCGCGACGTTCAACGAG GAAGTATTTCCGAAGCTGAAGGCCGCCTATATCGACACCGGCAAGGTCCGCTACGTGTTCCGCGAGTTCCCGCTCGACAT CAAGGCCGCCGCCGGCTCGATGCTGTCGCGCTGCATCGCCAAGGACGATTCGGCGAAGTACTTCGCCGTCACCGACCTGT TGTTCAAGACCCAGGCCGACTGGGTGATGAAGGACACCACCGAGCAGCTCAAGCGCATCGGCAAGCAGGCCGGCCTGTCG GCCGCGGACGTCGAGGCCTGCCTGAAGGACCAGGCGCTGCTCGACAAGATCGCCGCCGACCAGAAATACGCCAACGAAGT TCTCAAGGTGAACTCGACTCCGAGCTTCTTCGTCAACGGCGAAATGCTTCGCGGCGAAACCTCGCTGGAAGAATTCGCCA AGCGCATCGACCCCTTGCTGCAGAAGAAGAGCTGA
Upstream 100 bases:
>100_bases TGCCACAATTGCCGTTTCAAGCTAGCCAACGGCCTATCTGCGGCGGCCGCGCCGCGCCCCCTTATGCCTCGGCGGCGCGA CCGCCGCGTTGGAGCACCTG
Downstream 100 bases:
>100_bases GCTCGCGCGCGCTCCGCGCCTCCGAGAGCGTCATCCTGAGGTACGTCGCCCGATCAGGTCGGGCGATGACGCAGAGAGCG TGGGGCGAGCGCTGCTACCA
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MITRRTFTAALSLTGLAAVAGVSPFRLIGDAFAQSSAAATAADVAKPMSLPDMALGPKDAAVTITEYASMTCSHCATFNE EVFPKLKAAYIDTGKVRYVFREFPLDIKAAAGSMLSRCIAKDDSAKYFAVTDLLFKTQADWVMKDTTEQLKRIGKQAGLS AADVEACLKDQALLDKIAADQKYANEVLKVNSTPSFFVNGEMLRGETSLEEFAKRIDPLLQKKS
Sequences:
>Translated_224_residues MITRRTFTAALSLTGLAAVAGVSPFRLIGDAFAQSSAAATAADVAKPMSLPDMALGPKDAAVTITEYASMTCSHCATFNE EVFPKLKAAYIDTGKVRYVFREFPLDIKAAAGSMLSRCIAKDDSAKYFAVTDLLFKTQADWVMKDTTEQLKRIGKQAGLS AADVEACLKDQALLDKIAADQKYANEVLKVNSTPSFFVNGEMLRGETSLEEFAKRIDPLLQKKS >Mature_224_residues MITRRTFTAALSLTGLAAVAGVSPFRLIGDAFAQSSAAATAADVAKPMSLPDMALGPKDAAVTITEYASMTCSHCATFNE EVFPKLKAAYIDTGKVRYVFREFPLDIKAAAGSMLSRCIAKDDSAKYFAVTDLLFKTQADWVMKDTTEQLKRIGKQAGLS AADVEACLKDQALLDKIAADQKYANEVLKVNSTPSFFVNGEMLRGETSLEEFAKRIDPLLQKKS
Specific function: May be required for disulfide bond formation in some proteins [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24224; Mature: 24224
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRRTFTAALSLTGLAAVAGVSPFRLIGDAFAQSSAAATAADVAKPMSLPDMALGPKDA CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC AVTITEYASMTCSHCATFNEEVFPKLKAAYIDTGKVRYVFREFPLDIKAAAGSMLSRCIA EEEHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHEEHHHHCCCCHHHHHHHHHHHHHH KDDSAKYFAVTDLLFKTQADWVMKDTTEQLKRIGKQAGLSAADVEACLKDQALLDKIAAD CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH QKYANEVLKVNSTPSFFVNGEMLRGETSLEEFAKRIDPLLQKKS HHHHHHHEECCCCCCEEECCCEECCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MITRRTFTAALSLTGLAAVAGVSPFRLIGDAFAQSSAAATAADVAKPMSLPDMALGPKDA CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC AVTITEYASMTCSHCATFNEEVFPKLKAAYIDTGKVRYVFREFPLDIKAAAGSMLSRCIA EEEHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHEEHHHHCCCCHHHHHHHHHHHHHH KDDSAKYFAVTDLLFKTQADWVMKDTTEQLKRIGKQAGLSAADVEACLKDQALLDKIAAD CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH QKYANEVLKVNSTPSFFVNGEMLRGETSLEEFAKRIDPLLQKKS HHHHHHHEECCCCCCEEECCCEECCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA