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The map label for this gene is 86748190

Identifier: 86748190

GI number: 86748190

Start: 1220466

End: 1221449

Strand: Reverse

Name: 86748190

Synonym: RPB_1065

Alternate gene names: NA

Gene position: 1221449-1220466 (Counterclockwise)

Preceding gene: 86748191

Following gene: 86748189

Centisome position: 22.91

GC content: 70.43

Gene sequence:

>984_bases
ATGATCCCGCCGTCCCTCCCCGCCGAACTGAAGGCCGCGCTGGAGCAGGCGCTGCACCGCTTGCCGCGCGACGCGGCGGC
GACGCGGGCGGCTGCTATCTCACAGACCTATCGCGACGGCGGCAACTCTTCCCCGATCAAGACCACGACCGACGCGCTGG
CCTATGCGGGCGCGCGGATGCCGGCGACTTACGCGGCGGTGGCGGCGAGCCTGAATGCGCTGCGCGAGATCCGCCCGGAC
TTCGCCCCGCGCACGCTGCTCGATGTCGGCGCCGGACCGGGCACCGCGAGCTGGGCCGCCGCGCAGGCGTTCGACACGCT
GCAGAGCTTCACCCTGCTCGATGCCAACACGGCGTTACGCGCATTGGCGCTGACGCTGGCGCAAGGCAGCCCGCTCGCGG
GTGCGGACTACCAACTCGGCGACGCGCGCAAACTGCTCGGCGGGGCGCCGGACGCGGCCTTGGTGATCGCCAGCTACGTC
ATCAACGAACTCGACGACAAAGCGCGCGACGACTTCGCCGATGCGGCGTGGCGCAAGACCAGCGACACGCTGCTGATCGT
CGAGCCCGGCACGCCGGCCGGCTATGCCCGCATCCTCGCGGTCCGCGCGCGGCTGATCGCACAGGGCGCGCGCGTGATCG
CGCCGTGCCCGCACGAGCACGCCTGTCCGCTGACCGCGCCGGACTGGTGTCACTTCGTGCAGCGGCTACCGCGGTCGAGA
CTGCATCAACACCTCAAGGGCGCCGAACTTCCCTATGAGGACGAAAAATTCATCTATCTGGCGCTGAGCCGCACGGCGCC
GCCGTCGCGGCCCTCGCGCGTGCTGACGCAGCCGGTGCAGACCAAGGTGGCGATCACCGCCAAGCTGTGCACGCCGCAGG
GGCTCGACCATGCGGTCGCGCCGCGGCGTGACAAGCCGTCTTATGCGCGATTCCGCCGCCTGAGTTGGGGCGACACGATC
AGCACCGACACCGCACGGGAATAA

Upstream 100 bases:

>100_bases
GGACGGGGTGGGGTGAGCCACGGGCACCGCGTTTCGTAACTTCGCCACCCCACCCCGCTCGCTACGCGAGCGACCCTCCC
CCTCCAGGGGAGGGTGAAGC

Downstream 100 bases:

>100_bases
TCGGCGCGCGGCGCTGTTGGTGAAGACGACGCGCCCCGCGTCGCCCCGTTCACCAGGAGTCACCATGTCCCGCACGCTCA
CGCTTTTCACCGCCGCCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Methyltransferase Type; SAM Methyltransferase; Methyltransferase; rRNA Methylase; rRNA Methylase-Like Protein

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MIPPSLPAELKAALEQALHRLPRDAAATRAAAISQTYRDGGNSSPIKTTTDALAYAGARMPATYAAVAASLNALREIRPD
FAPRTLLDVGAGPGTASWAAAQAFDTLQSFTLLDANTALRALALTLAQGSPLAGADYQLGDARKLLGGAPDAALVIASYV
INELDDKARDDFADAAWRKTSDTLLIVEPGTPAGYARILAVRARLIAQGARVIAPCPHEHACPLTAPDWCHFVQRLPRSR
LHQHLKGAELPYEDEKFIYLALSRTAPPSRPSRVLTQPVQTKVAITAKLCTPQGLDHAVAPRRDKPSYARFRRLSWGDTI
STDTARE

Sequences:

>Translated_327_residues
MIPPSLPAELKAALEQALHRLPRDAAATRAAAISQTYRDGGNSSPIKTTTDALAYAGARMPATYAAVAASLNALREIRPD
FAPRTLLDVGAGPGTASWAAAQAFDTLQSFTLLDANTALRALALTLAQGSPLAGADYQLGDARKLLGGAPDAALVIASYV
INELDDKARDDFADAAWRKTSDTLLIVEPGTPAGYARILAVRARLIAQGARVIAPCPHEHACPLTAPDWCHFVQRLPRSR
LHQHLKGAELPYEDEKFIYLALSRTAPPSRPSRVLTQPVQTKVAITAKLCTPQGLDHAVAPRRDKPSYARFRRLSWGDTI
STDTARE
>Mature_327_residues
MIPPSLPAELKAALEQALHRLPRDAAATRAAAISQTYRDGGNSSPIKTTTDALAYAGARMPATYAAVAASLNALREIRPD
FAPRTLLDVGAGPGTASWAAAQAFDTLQSFTLLDANTALRALALTLAQGSPLAGADYQLGDARKLLGGAPDAALVIASYV
INELDDKARDDFADAAWRKTSDTLLIVEPGTPAGYARILAVRARLIAQGARVIAPCPHEHACPLTAPDWCHFVQRLPRSR
LHQHLKGAELPYEDEKFIYLALSRTAPPSRPSRVLTQPVQTKVAITAKLCTPQGLDHAVAPRRDKPSYARFRRLSWGDTI
STDTARE

Specific function: Unknown

COG id: COG5459

COG function: function code J; Predicted rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI12232389, Length=294, Percent_Identity=32.312925170068, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI71999135, Length=284, Percent_Identity=31.3380281690141, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI19921026, Length=179, Percent_Identity=30.1675977653631, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35067; Mature: 35067

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPPSLPAELKAALEQALHRLPRDAAATRAAAISQTYRDGGNSSPIKTTTDALAYAGARM
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC
PATYAAVAASLNALREIRPDFAPRTLLDVGAGPGTASWAAAQAFDTLQSFTLLDANTALR
CHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHH
ALALTLAQGSPLAGADYQLGDARKLLGGAPDAALVIASYVINELDDKARDDFADAAWRKT
HHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SDTLLIVEPGTPAGYARILAVRARLIAQGARVIAPCPHEHACPLTAPDWCHFVQRLPRSR
CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHCCHHH
LHQHLKGAELPYEDEKFIYLALSRTAPPSRPSRVLTQPVQTKVAITAKLCTPQGLDHAVA
HHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCC
PRRDKPSYARFRRLSWGDTISTDTARE
CCCCCCHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MIPPSLPAELKAALEQALHRLPRDAAATRAAAISQTYRDGGNSSPIKTTTDALAYAGARM
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC
PATYAAVAASLNALREIRPDFAPRTLLDVGAGPGTASWAAAQAFDTLQSFTLLDANTALR
CHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHH
ALALTLAQGSPLAGADYQLGDARKLLGGAPDAALVIASYVINELDDKARDDFADAAWRKT
HHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SDTLLIVEPGTPAGYARILAVRARLIAQGARVIAPCPHEHACPLTAPDWCHFVQRLPRSR
CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHCCHHH
LHQHLKGAELPYEDEKFIYLALSRTAPPSRPSRVLTQPVQTKVAITAKLCTPQGLDHAVA
HHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCC
PRRDKPSYARFRRLSWGDTISTDTARE
CCCCCCHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA