Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86748156

Identifier: 86748156

GI number: 86748156

Start: 1184526

End: 1184849

Strand: Direct

Name: 86748156

Synonym: RPB_1031

Alternate gene names: NA

Gene position: 1184526-1184849 (Clockwise)

Preceding gene: 86748152

Following gene: 86748157

Centisome position: 22.22

GC content: 69.75

Gene sequence:

>324_bases
GTGCGTACAGTCCGGTTTATGGTTCCTTTGGTAGCGGGTCTGGTGACAGCCACGGCGGCGATGGCCGCGGACTATCCGCC
GGCGCCGTACCGATCGGCCTACCGGGCCGCGCCCGCGCCGGTCACCTATTACGCGCCGCGCCCGATCGGAATTCCGCAGG
CGCCGCCGGTGATCTGGGTCGAGGCGCCGCCGCAATACGTCCAGCATCTGGTGCCGACCGGCGCCTGTGGCGGCTGCGGG
CCGCAATACAGGGCCGTCGGCGAATGGCGCCGGACCCCGCCGCCGGCGTTTTGGGACTCGATCTATCGCGATTACGGCTA
CTGA

Upstream 100 bases:

>100_bases
GCCGCCGGTCGAGCGGCCGATCCGGCCTGCGAGCCGTCTGCAGGCTTTGTTTACGATATCGTGCGAGCGTGCTGCATCGG
TTCGGTTCGGAGTAGCGTCG

Downstream 100 bases:

>100_bases
TCACCGCCACATTTTGCAGTCCGTCCTGCGCGATCGTTGCAGGCGGCCACGCGGAATCACGCTATAGCTGCGGCGAGGGC
GCGGCGATTCAGATCCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MRTVRFMVPLVAGLVTATAAMAADYPPAPYRSAYRAAPAPVTYYAPRPIGIPQAPPVIWVEAPPQYVQHLVPTGACGGCG
PQYRAVGEWRRTPPPAFWDSIYRDYGY

Sequences:

>Translated_107_residues
MRTVRFMVPLVAGLVTATAAMAADYPPAPYRSAYRAAPAPVTYYAPRPIGIPQAPPVIWVEAPPQYVQHLVPTGACGGCG
PQYRAVGEWRRTPPPAFWDSIYRDYGY
>Mature_107_residues
MRTVRFMVPLVAGLVTATAAMAADYPPAPYRSAYRAAPAPVTYYAPRPIGIPQAPPVIWVEAPPQYVQHLVPTGACGGCG
PQYRAVGEWRRTPPPAFWDSIYRDYGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11739; Mature: 11739

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVRFMVPLVAGLVTATAAMAADYPPAPYRSAYRAAPAPVTYYAPRPIGIPQAPPVIWV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCCCEEEE
EAPPQYVQHLVPTGACGGCGPQYRAVGEWRRTPPPAFWDSIYRDYGY
ECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MRTVRFMVPLVAGLVTATAAMAADYPPAPYRSAYRAAPAPVTYYAPRPIGIPQAPPVIWV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCCCEEEE
EAPPQYVQHLVPTGACGGCGPQYRAVGEWRRTPPPAFWDSIYRDYGY
ECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA