Click here to switch to the map view.

The map label for this gene is 86748130

Identifier: 86748130

GI number: 86748130

Start: 1150888

End: 1151247

Strand: Direct

Name: 86748130

Synonym: RPB_1005

Alternate gene names: NA

Gene position: 1150888-1151247 (Clockwise)

Preceding gene: 86748128

Following gene: 86748133

Centisome position: 21.59

GC content: 69.44

Gene sequence:

>360_bases
ATGACTGAGTTTCCGGCAAGGTACCAGACCGCGTTGCGCGTGGCGGCATGGCTGGGTCTGGCGTTCGTCGCGATGGCGAC
GCTCAGTCCGCTGGGCCTTCGCCCGACCACCGGATGGCCGCCGTCGATCGAGCGGTTTCTCGCCTTCGCGCTGGTCGGCG
GTTTGTTCGCCGCGGCCTATCCGCGTTACATCCTGTTCGCCGCCGCGATCGTGCTCGGCGCGGCGTTGCTGTTCGAGATC
CTGCAGGTGCTGGCGCCGTCGCGGCACGGCCGGCTGTTCGATGCCGCGGTGAAACTGTCGGGCGGAACGGTCGGGCTGAT
CGCCGGCTGGCTTGCGGTGCGGTGGATGCCGCGGCGGTGA

Upstream 100 bases:

>100_bases
TGCGTGTGAGGTTAAGACTGTGCCGCAGTTCCAATTCGCTCGGCAGAGACGGAATTGACGGATTGTTAACCATACGCGAT
CCGTTGCGGACGAGGCCTGC

Downstream 100 bases:

>100_bases
TGCGTCGGCGGCTTCAGCGGCCGCGCGCGTCGACCGGCGCGCCGAGTCGATCGGGCAGCCGCAACGCCTCGATCTTCGGC
TGGATGATGGTTCCGTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MTEFPARYQTALRVAAWLGLAFVAMATLSPLGLRPTTGWPPSIERFLAFALVGGLFAAAYPRYILFAAAIVLGAALLFEI
LQVLAPSRHGRLFDAAVKLSGGTVGLIAGWLAVRWMPRR

Sequences:

>Translated_119_residues
MTEFPARYQTALRVAAWLGLAFVAMATLSPLGLRPTTGWPPSIERFLAFALVGGLFAAAYPRYILFAAAIVLGAALLFEI
LQVLAPSRHGRLFDAAVKLSGGTVGLIAGWLAVRWMPRR
>Mature_118_residues
TEFPARYQTALRVAAWLGLAFVAMATLSPLGLRPTTGWPPSIERFLAFALVGGLFAAAYPRYILFAAAIVLGAALLFEIL
QVLAPSRHGRLFDAAVKLSGGTVGLIAGWLAVRWMPRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12841; Mature: 12710

Theoretical pI: Translated: 11.93; Mature: 11.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEFPARYQTALRVAAWLGLAFVAMATLSPLGLRPTTGWPPSIERFLAFALVGGLFAAAY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
PRYILFAAAIVLGAALLFEILQVLAPSRHGRLFDAAVKLSGGTVGLIAGWLAVRWMPRR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TEFPARYQTALRVAAWLGLAFVAMATLSPLGLRPTTGWPPSIERFLAFALVGGLFAAAY
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
PRYILFAAAIVLGAALLFEILQVLAPSRHGRLFDAAVKLSGGTVGLIAGWLAVRWMPRR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA