BacMap

Definition	Rhodopseudomonas palustris HaA2, complete genome.
Accession	NC_007778
Length	5,331,656

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The map label for this gene is fabG [H]

Identifier: 86748119

GI number: 86748119

Start: 1138049

End: 1138780

Strand: Reverse

Name: fabG [H]

Synonym: RPB_0994

Alternate gene names: 86748119

Gene position: 1138780-1138049 (Counterclockwise)

Preceding gene: 86748120

Following gene: 86748116

Centisome position: 21.36

GC content: 68.85

Gene sequence:

>732_bases
ATGCGTAAGGTGGTGGTCACCGGCGGCAGCCGCGGCATCGGGCTGGCGATCGCGCAGCGGCTCGCCGCCGCCGGCTACGG
CGTCATCGCCGTGGCGCGGCGCGAGAGCGAGGAGCTGACGGCGGCGATCGTCGCGGCCGAAGCCGGCCCGGGCGCGATCC
ATTTCAAAGCGTTCGATCTCGGCGAGATCGACGCCATTCCGGAATTCGTCAAGAGCCTGCGGCAGGAGTTCGGCTCGATC
TACGGGCTGATCAACAACGCCGGCATCGGCACCGAAGGCGTGCTGGCGACGATGCACAACAGCCAGATCGAGGCGCTGAT
CCGCATCAACGTCACCTCGCCGATCGTGCTGACCAAATACATCGTCCGGCAGATGATGGCCGACGGCGGCGGCCGCATCG
TCAACATGTCGTCGATCATCGGTTCGACCGGCTACAACGGCCTGTCGGTCTACGGCGCCACCAAGGCGGCGGCCCTCGGC
TTTACCCGCTCGCTGGCGCGCGAGGTCGGGCGGCTCGGCATCACCGTGAACGCGATCGCGCCGGGCTTCATCGACACCGA
ACTGACCAAGGGCCTCGCCGGCGACGGCCGCGACAAGATCGCGGGCCGCAGCGCGCTGCGGCGACTGCCGGAGGTCGACG
ACGTCGCCCGCATGGTCGAGTATCTGCTCGGCGACGGCGGCCGCAACATCACCGGCGCGGTGCAGACCATCGATGCGGGG
AACACGGCGTAG

Upstream 100 bases:

>100_bases
CTCGCCGATTGCAAGGCGTCGCTGCCGCCCCACAAGGTCCCGGCGATGGTGAACTTCGTCCAGCAGCTCGACGTCACCGC
CTCCGGCAAGCTGGCCCGCC

Downstream 100 bases:

>100_bases
CGTGCTGGTGCGCTGAGGCCTCCGTGCCGCTCAACAGCGCGCCCCCTCTCCCGCCTGCGGGAGAGGGTTGGGGTGAGGGC
GCCCCAGGCAGTGAGTCCCG

Product: 3-oxoacyl-acyl carrier protein reductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MRKVVVTGGSRGIGLAIAQRLAAAGYGVIAVARRESEELTAAIVAAEAGPGAIHFKAFDLGEIDAIPEFVKSLRQEFGSI
YGLINNAGIGTEGVLATMHNSQIEALIRINVTSPIVLTKYIVRQMMADGGGRIVNMSSIIGSTGYNGLSVYGATKAAALG
FTRSLAREVGRLGITVNAIAPGFIDTELTKGLAGDGRDKIAGRSALRRLPEVDDVARMVEYLLGDGGRNITGAVQTIDAG
NTA

Sequences:

>Translated_243_residues
MRKVVVTGGSRGIGLAIAQRLAAAGYGVIAVARRESEELTAAIVAAEAGPGAIHFKAFDLGEIDAIPEFVKSLRQEFGSI
YGLINNAGIGTEGVLATMHNSQIEALIRINVTSPIVLTKYIVRQMMADGGGRIVNMSSIIGSTGYNGLSVYGATKAAALG
FTRSLAREVGRLGITVNAIAPGFIDTELTKGLAGDGRDKIAGRSALRRLPEVDDVARMVEYLLGDGGRNITGAVQTIDAG
NTA
>Mature_243_residues
MRKVVVTGGSRGIGLAIAQRLAAAGYGVIAVARRESEELTAAIVAAEAGPGAIHFKAFDLGEIDAIPEFVKSLRQEFGSI
YGLINNAGIGTEGVLATMHNSQIEALIRINVTSPIVLTKYIVRQMMADGGGRIVNMSSIIGSTGYNGLSVYGATKAAALG
FTRSLAREVGRLGITVNAIAPGFIDTELTKGLAGDGRDKIAGRSALRRLPEVDDVARMVEYLLGDGGRNITGAVQTIDAG
NTA

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=35.9504132231405, Blast_Score=121, Evalue=7e-28,
Organism=Homo sapiens, GI32483357, Length=231, Percent_Identity=31.1688311688312, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI15277342, Length=237, Percent_Identity=31.6455696202532, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI5031737, Length=235, Percent_Identity=28.0851063829787, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI20149619, Length=199, Percent_Identity=31.6582914572864, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI7705925, Length=248, Percent_Identity=28.6290322580645, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI66933014, Length=227, Percent_Identity=28.1938325991189, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI40807363, Length=192, Percent_Identity=30.2083333333333, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI126723750, Length=236, Percent_Identity=28.3898305084746, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI19923817, Length=248, Percent_Identity=27.8225806451613, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI33667109, Length=191, Percent_Identity=29.8429319371728, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI31542939, Length=194, Percent_Identity=30.4123711340206, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI4503817, Length=203, Percent_Identity=30.0492610837438, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI10190704, Length=244, Percent_Identity=31.1475409836066, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI32455239, Length=192, Percent_Identity=31.25, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI5031765, Length=192, Percent_Identity=31.25, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI157739938, Length=190, Percent_Identity=27.8947368421053, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI109715829, Length=243, Percent_Identity=28.3950617283951, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI210032110, Length=219, Percent_Identity=26.4840182648402, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI142976729, Length=193, Percent_Identity=29.5336787564767, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI7706318, Length=198, Percent_Identity=31.3131313131313, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI7657478, Length=190, Percent_Identity=28.9473684210526, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI210032112, Length=151, Percent_Identity=27.8145695364238, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI126723191, Length=176, Percent_Identity=29.5454545454545, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI4557649, Length=202, Percent_Identity=29.2079207920792, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI225579078, Length=202, Percent_Identity=30.6930693069307, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI1787335, Length=236, Percent_Identity=37.7118644067797, Blast_Score=140, Evalue=8e-35,
Organism=Escherichia coli, GI2367365, Length=241, Percent_Identity=34.0248962655602, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=30.6772908366534, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI2367175, Length=243, Percent_Identity=32.9218106995885, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1790717, Length=200, Percent_Identity=30, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1789208, Length=209, Percent_Identity=32.0574162679426, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI1788459, Length=239, Percent_Identity=29.7071129707113, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87082160, Length=188, Percent_Identity=28.1914893617021, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1786701, Length=205, Percent_Identity=31.219512195122, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1787820, Length=225, Percent_Identity=29.7777777777778, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1789378, Length=250, Percent_Identity=29.6, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786812, Length=251, Percent_Identity=25.0996015936255, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1787526, Length=244, Percent_Identity=27.4590163934426, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17555706, Length=243, Percent_Identity=35.3909465020576, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI25147288, Length=244, Percent_Identity=34.4262295081967, Blast_Score=110, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI115534694, Length=242, Percent_Identity=32.2314049586777, Blast_Score=110, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17560676, Length=242, Percent_Identity=31.8181818181818, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17561402, Length=242, Percent_Identity=31.8181818181818, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=30.241935483871, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=30.1204819277108, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17564282, Length=196, Percent_Identity=31.1224489795918, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17562910, Length=207, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17562904, Length=198, Percent_Identity=28.7878787878788, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17508895, Length=192, Percent_Identity=27.6041666666667, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI25152911, Length=194, Percent_Identity=31.9587628865979, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI212646214, Length=191, Percent_Identity=31.413612565445, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17563726, Length=241, Percent_Identity=26.5560165975104, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17565030, Length=203, Percent_Identity=32.512315270936, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17560150, Length=265, Percent_Identity=26.0377358490566, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17560332, Length=263, Percent_Identity=29.277566539924, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17562908, Length=189, Percent_Identity=31.2169312169312, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17544670, Length=239, Percent_Identity=26.7782426778243, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17551412, Length=201, Percent_Identity=29.8507462686567, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17562906, Length=204, Percent_Identity=30.3921568627451, Blast_Score=64, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI193203117, Length=200, Percent_Identity=28, Blast_Score=64, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI193203115, Length=200, Percent_Identity=28, Blast_Score=64, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6323882, Length=232, Percent_Identity=31.8965517241379, Blast_Score=92, Evalue=5e-20,
Organism=Saccharomyces cerevisiae, GI6322795, Length=240, Percent_Identity=29.1666666666667, Blast_Score=79, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6320089, Length=191, Percent_Identity=28.7958115183246, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6322227, Length=197, Percent_Identity=28.4263959390863, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322861, Length=187, Percent_Identity=28.3422459893048, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21358495, Length=245, Percent_Identity=31.0204081632653, Blast_Score=94, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24639444, Length=241, Percent_Identity=28.2157676348548, Blast_Score=88, Evalue=4e-18,
Organism=Drosophila melanogaster, GI23397609, Length=254, Percent_Identity=31.496062992126, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=31.2, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=31.6, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24643142, Length=236, Percent_Identity=30.9322033898305, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI21356301, Length=200, Percent_Identity=31, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21355319, Length=247, Percent_Identity=29.5546558704453, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24648944, Length=229, Percent_Identity=31.0043668122271, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI116007236, Length=196, Percent_Identity=29.5918367346939, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24644339, Length=250, Percent_Identity=30.4, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24641232, Length=237, Percent_Identity=30.8016877637131, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI221331218, Length=192, Percent_Identity=30.2083333333333, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24665243, Length=192, Percent_Identity=30.2083333333333, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI19921754, Length=203, Percent_Identity=27.0935960591133, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI22024069, Length=205, Percent_Identity=28.780487804878, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24656154, Length=207, Percent_Identity=29.4685990338164, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI19922628, Length=207, Percent_Identity=29.4685990338164, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24665247, Length=193, Percent_Identity=30.0518134715026, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI221331216, Length=193, Percent_Identity=30.0518134715026, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI161076371, Length=201, Percent_Identity=28.3582089552239, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24586328, Length=203, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581726, Length=137, Percent_Identity=31.3868613138686, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571387, Length=234, Percent_Identity=29.0598290598291, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24584748, Length=194, Percent_Identity=30.4123711340206, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI161076933, Length=194, Percent_Identity=30.4123711340206, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24644337, Length=186, Percent_Identity=30.1075268817204, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI116007234, Length=236, Percent_Identity=27.5423728813559, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 25229; Mature: 25229

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVVVTGGSRGIGLAIAQRLAAAGYGVIAVARRESEELTAAIVAAEAGPGAIHFKAFDL
CCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHEEEEEEECCCCCEEEEEEECC
GEIDAIPEFVKSLRQEFGSIYGLINNAGIGTEGVLATMHNSQIEALIRINVTSPIVLTKY
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEECCCHHHHHHH
IVRQMMADGGGRIVNMSSIIGSTGYNGLSVYGATKAAALGFTRSLAREVGRLGITVNAIA
HHHHHHHCCCCEEEEHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCEEEEECC
PGFIDTELTKGLAGDGRDKIAGRSALRRLPEVDDVARMVEYLLGDGGRNITGAVQTIDAG
CCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCC
NTA
CCC
>Mature Secondary Structure
MRKVVVTGGSRGIGLAIAQRLAAAGYGVIAVARRESEELTAAIVAAEAGPGAIHFKAFDL
CCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHEEEEEEECCCCCEEEEEEECC
GEIDAIPEFVKSLRQEFGSIYGLINNAGIGTEGVLATMHNSQIEALIRINVTSPIVLTKY
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEECCCHHHHHHH
IVRQMMADGGGRIVNMSSIIGSTGYNGLSVYGATKAAALGFTRSLAREVGRLGITVNAIA
HHHHHHHCCCCEEEEHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCEEEEECC
PGFIDTELTKGLAGDGRDKIAGRSALRRLPEVDDVARMVEYLLGDGGRNITGAVQTIDAG
CCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCC
NTA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759840; 9384377; 9534248; 8654983 [H]