Click here to switch to the map view.

The map label for this gene is fixX [H]

Identifier: 86748112

GI number: 86748112

Start: 1132830

End: 1133126

Strand: Direct

Name: fixX [H]

Synonym: RPB_0987

Alternate gene names: 86748112

Gene position: 1132830-1133126 (Clockwise)

Preceding gene: 86748111

Following gene: 86748113

Centisome position: 21.25

GC content: 63.64

Gene sequence:

>297_bases
ATGACGGTGGAAGCCCCCATTCGGGTCGAGGACAAGCTGTTCCAGAACCGCTATCTGGTCGACGTCGGCAACGCTCACAT
CCGGGTGAAGCCGCACACCAAGCCGTCGGCTGAACTGCTGGCGCTGCTCAAAGTCTGCCCGGCGCATTGCTACGAGCTGA
ATACCAACGGCCAGGTCGAGGTGACGCCCGACGGCTGCGTCGAATGCGGCACCTGCCGGGTGATCGCCGAGGGCAATGGC
GACATCGAATGGGACTATCCGCGCGGCGGCTACGGCGTGCTGTTCAAGTTCGGCTGA

Upstream 100 bases:

>100_bases
TCGGCGCGATCCTGGGCGGGCCTGTTCGGCGACGCCTTCCGCTTCGCGCGGGCATGGCGGTGAACGGCGACGGCGACGAA
CTCAAACGCGGAGAGCAACA

Downstream 100 bases:

>100_bases
GCGTAGAGCGGTTCATCGATGGATTGAAGCAACGCGGCATTCGCGCGTGCGGAGTCGTCATCCTGAGGTGCGAGCGTAGC
GAGCCTCGAAGGATGCGGCC

Product: ferredoxin like protein, fixX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MTVEAPIRVEDKLFQNRYLVDVGNAHIRVKPHTKPSAELLALLKVCPAHCYELNTNGQVEVTPDGCVECGTCRVIAEGNG
DIEWDYPRGGYGVLFKFG

Sequences:

>Translated_98_residues
MTVEAPIRVEDKLFQNRYLVDVGNAHIRVKPHTKPSAELLALLKVCPAHCYELNTNGQVEVTPDGCVECGTCRVIAEGNG
DIEWDYPRGGYGVLFKFG
>Mature_97_residues
TVEAPIRVEDKLFQNRYLVDVGNAHIRVKPHTKPSAELLALLKVCPAHCYELNTNGQVEVTPDGCVECGTCRVIAEGNGD
IEWDYPRGGYGVLFKFG

Specific function: Could be a 3Fe-4S cluster-containing protein [H]

COG id: COG2440

COG function: function code C; Ferredoxin-like protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To ferredoxins from P.putida and C.tartarivorum, ferredoxin I from A.vinelandii, ferredoxin II from D.desulfuricans [H]

Homologues:

Organism=Escherichia coli, GI1786228, Length=96, Percent_Identity=40.625, Blast_Score=78, Evalue=1e-16,
Organism=Escherichia coli, GI1787992, Length=99, Percent_Identity=38.3838383838384, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR012206 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10835; Mature: 10703

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVEAPIRVEDKLFQNRYLVDVGNAHIRVKPHTKPSAELLALLKVCPAHCYELNTNGQVE
CCCCCCCCCCCHHHCCEEEEEECCEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCEEE
VTPDGCVECGTCRVIAEGNGDIEWDYPRGGYGVLFKFG
ECCCCCEECCEEEEEECCCCCEEECCCCCCEEEEEEEC
>Mature Secondary Structure 
TVEAPIRVEDKLFQNRYLVDVGNAHIRVKPHTKPSAELLALLKVCPAHCYELNTNGQVE
CCCCCCCCCCHHHCCEEEEEECCEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCEEE
VTPDGCVECGTCRVIAEGNGDIEWDYPRGGYGVLFKFG
ECCCCCEECCEEEEEECCCCCEEECCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1850088 [H]