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The map label for this gene is fixB [H]

Identifier: 86748110

GI number: 86748110

Start: 1130369

End: 1131472

Strand: Direct

Name: fixB [H]

Synonym: RPB_0985

Alternate gene names: 86748110

Gene position: 1130369-1131472 (Clockwise)

Preceding gene: 86748109

Following gene: 86748111

Centisome position: 21.2

GC content: 68.12

Gene sequence:

>1104_bases
ATGAGCCAGCCAGCAAAGCCTGCCCCGCCCGCCGGACGCGCCAACGCCAAGAAGGAGCTGTCCGAGCACTTCAAGCAGTA
CAAGCACGTCTGGGTGTTCGTCGAGCAGGAGCGCGGCCACGTCCACCCGGTGTCCTGGGAGCTGATGGGCTCCGGCCGCC
GTCTCGCCGACAAGCTCGGCGTCGAGCTCGCCGCGGTGGTGATCGGCCCGGCCGGCGAGGCGACCAGCGCGGCGGCGGCG
GAATCGTTCTGCTACGGCGCCGATCTCGCCTACATCGTCGCCGACGACGTGCTCACCGATTATCGCAACGAATCCTACAC
CAAGGCGCTGACCGATCTGGTCAACACCTACAAGCCCGAGATCCTGCTGCTCGGCGCCACCACGCTCGGCCGCGATCTCG
CCGGCGCCGTCGCGACCACGCTGCTGACCGGCCTCACCGCCGACTGCACCGAGCTCGAGGTCGACGCCGACAATTCGCTC
GCCGCGACCCGGCCGACCTTCGGCGGCTCGCTGCTGTGCACGATCTACACGCTGAACTTCCGGCCGCAGATGGCGACCGT
GCGGCCGCGCGTGATGGAAATGCCGGAGCGCGTCGAGAAGCCGGTCGGCCGCATCATCGAATTCCCGCTCGGCATGGTCG
AGGACGACATCGTCACCAAGATCCTGGCGTTCGTGCCGGATCGCGACAAGGCGACCTCGAACCTGGCCTACGCCGACATC
GTCGTCGCCGGCGGCATGGGGCTCAACTCGCTGGAGAACTTCCAGCTGGTGCGCCAGCTCGCCGGCGTGCTCGGCGCCGA
ATATGGCTGCTCGCGGCCGCTGGTGCAGAAGGGTTGGGTCTCGGCCGATCGCCAGATCGGCCAGACCGGCAAGACGATCC
GGCCGAAGCTGTACATCGCGGCCGGCATTTCCGGCGCGATCCAGCATCGCGTCGGCGTCGACGGCGCCGATCTGATCGTC
GCCATCAACACCGACAAGAACGCGCCGATCTTCGACTTCGCGCATCTGGCGATCGTCACCGACGCGATCCGCCTGCTGCC
GGCGCTGACCGAAGCATTCCGCAAGCGGCTGTCGCCGCACACCCGCGACCGCATCGCGAGCTAA

Upstream 100 bases:

>100_bases
CGCGCTGATCGACGAGATCTTCAAGCTCCGGCCGAAACTCGAAGCCGACATGTTCGAGCTCGCGCGTGGATTTTGACAAC
ACCAATTTGAAAGCAGTCTC

Downstream 100 bases:

>100_bases
CAGGAGTTCACCATGATCGAGGAACGTTTCGACGCGATCGTGGTCGGCGCCGGCATGGCCGGAAACGCCGCCGCGCTGAC
GATGGCCAAACGCGGCATGA

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MSQPAKPAPPAGRANAKKELSEHFKQYKHVWVFVEQERGHVHPVSWELMGSGRRLADKLGVELAAVVIGPAGEATSAAAA
ESFCYGADLAYIVADDVLTDYRNESYTKALTDLVNTYKPEILLLGATTLGRDLAGAVATTLLTGLTADCTELEVDADNSL
AATRPTFGGSLLCTIYTLNFRPQMATVRPRVMEMPERVEKPVGRIIEFPLGMVEDDIVTKILAFVPDRDKATSNLAYADI
VVAGGMGLNSLENFQLVRQLAGVLGAEYGCSRPLVQKGWVSADRQIGQTGKTIRPKLYIAAGISGAIQHRVGVDGADLIV
AINTDKNAPIFDFAHLAIVTDAIRLLPALTEAFRKRLSPHTRDRIAS

Sequences:

>Translated_367_residues
MSQPAKPAPPAGRANAKKELSEHFKQYKHVWVFVEQERGHVHPVSWELMGSGRRLADKLGVELAAVVIGPAGEATSAAAA
ESFCYGADLAYIVADDVLTDYRNESYTKALTDLVNTYKPEILLLGATTLGRDLAGAVATTLLTGLTADCTELEVDADNSL
AATRPTFGGSLLCTIYTLNFRPQMATVRPRVMEMPERVEKPVGRIIEFPLGMVEDDIVTKILAFVPDRDKATSNLAYADI
VVAGGMGLNSLENFQLVRQLAGVLGAEYGCSRPLVQKGWVSADRQIGQTGKTIRPKLYIAAGISGAIQHRVGVDGADLIV
AINTDKNAPIFDFAHLAIVTDAIRLLPALTEAFRKRLSPHTRDRIAS
>Mature_366_residues
SQPAKPAPPAGRANAKKELSEHFKQYKHVWVFVEQERGHVHPVSWELMGSGRRLADKLGVELAAVVIGPAGEATSAAAAE
SFCYGADLAYIVADDVLTDYRNESYTKALTDLVNTYKPEILLLGATTLGRDLAGAVATTLLTGLTADCTELEVDADNSLA
ATRPTFGGSLLCTIYTLNFRPQMATVRPRVMEMPERVEKPVGRIIEFPLGMVEDDIVTKILAFVPDRDKATSNLAYADIV
VAGGMGLNSLENFQLVRQLAGVLGAEYGCSRPLVQKGWVSADRQIGQTGKTIRPKLYIAAGISGAIQHRVGVDGADLIVA
INTDKNAPIFDFAHLAIVTDAIRLLPALTEAFRKRLSPHTRDRIAS

Specific function: May play a role in a redox process involved in nitrogen fixation [H]

COG id: COG2025

COG function: function code C; Electron transfer flavoprotein, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF alpha-subunit/fixB family [H]

Homologues:

Organism=Homo sapiens, GI4503607, Length=341, Percent_Identity=30.2052785923754, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI189181759, Length=289, Percent_Identity=32.8719723183391, Blast_Score=119, Evalue=3e-27,
Organism=Escherichia coli, GI1787990, Length=336, Percent_Identity=32.4404761904762, Blast_Score=138, Evalue=6e-34,
Organism=Escherichia coli, GI1786226, Length=129, Percent_Identity=44.9612403100775, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI87082157, Length=254, Percent_Identity=27.5590551181102, Blast_Score=65, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17506929, Length=341, Percent_Identity=30.4985337243402, Blast_Score=125, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6325261, Length=336, Percent_Identity=28.5714285714286, Blast_Score=104, Evalue=2e-23,
Organism=Drosophila melanogaster, GI17136898, Length=333, Percent_Identity=30.3303303303303, Blast_Score=135, Evalue=4e-32,
Organism=Drosophila melanogaster, GI24652801, Length=333, Percent_Identity=30.3303303303303, Blast_Score=135, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001308
- InterPro:   IPR014730
- InterPro:   IPR014731
- InterPro:   IPR018206
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]

EC number: NA

Molecular weight: Translated: 39597; Mature: 39466

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS00696 ETF_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPAKPAPPAGRANAKKELSEHFKQYKHVWVFVEQERGHVHPVSWELMGSGRRLADKLG
CCCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCEEECCCHHHHHHHC
VELAAVVIGPAGEATSAAAAESFCYGADLAYIVADDVLTDYRNESYTKALTDLVNTYKPE
CEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHCCCCC
ILLLGATTLGRDLAGAVATTLLTGLTADCTELEVDADNSLAATRPTFGGSLLCTIYTLNF
EEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEC
RPQMATVRPRVMEMPERVEKPVGRIIEFPLGMVEDDIVTKILAFVPDRDKATSNLAYADI
CCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEE
VVAGGMGLNSLENFQLVRQLAGVLGAEYGCSRPLVQKGWVSADRQIGQTGKTIRPKLYIA
EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCEEEEE
AGISGAIQHRVGVDGADLIVAINTDKNAPIFDFAHLAIVTDAIRLLPALTEAFRKRLSPH
ECCCHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TRDRIAS
CHHHCCC
>Mature Secondary Structure 
SQPAKPAPPAGRANAKKELSEHFKQYKHVWVFVEQERGHVHPVSWELMGSGRRLADKLG
CCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCEEECCCHHHHHHHC
VELAAVVIGPAGEATSAAAAESFCYGADLAYIVADDVLTDYRNESYTKALTDLVNTYKPE
CEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHCCCCC
ILLLGATTLGRDLAGAVATTLLTGLTADCTELEVDADNSLAATRPTFGGSLLCTIYTLNF
EEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEC
RPQMATVRPRVMEMPERVEKPVGRIIEFPLGMVEDDIVTKILAFVPDRDKATSNLAYADI
CCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEE
VVAGGMGLNSLENFQLVRQLAGVLGAEYGCSRPLVQKGWVSADRQIGQTGKTIRPKLYIA
EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCEEEEE
AGISGAIQHRVGVDGADLIVAINTDKNAPIFDFAHLAIVTDAIRLLPALTEAFRKRLSPH
ECCCHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TRDRIAS
CHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1850088 [H]