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The map label for this gene is 86748087

Identifier: 86748087

GI number: 86748087

Start: 1111172

End: 1111711

Strand: Direct

Name: 86748087

Synonym: RPB_0962

Alternate gene names: NA

Gene position: 1111172-1111711 (Clockwise)

Preceding gene: 86748086

Following gene: 86748088

Centisome position: 20.84

GC content: 65.19

Gene sequence:

>540_bases
ATGCCGCATGTCCTGCACAGCGAGCTGACGATGTCCGGACCCGAGCAATCGCTGCTCGGCGGCGCGTTGCTCGGTGCGGG
ACTGCCGGCCGAGGCGCAGCGGCATCTCGAACTGGCCGGACGCGACTATCAGAGCGATGCCGTCGCCGAGCAGCATCTGC
GCGAAGCCCAGGCGCTGGCGCCCGATCATGCCGCGGTGCTGATCGGGCTGTATCGCTTTTATTTCTACAAGGGCCGGCTC
GACGAGGCGTTACGCGTCGCTGAAGTCTGCCTGGCGAAGGCCGCGCGTGACAATGGACTCGACCTCGACTGGCGCAAGGT
CCGGCGCAGCGACGCCGAGTTTTCCAGCTTCGCCGCCATCCTGCCGCGGTTCTATCTGTTCGCGCTGAAAGCCTACGCGT
ATTTGCGGATGCGGGTCGGCGATATCGACGAGGGCCATGCGGCGATCGAGAAGCTGCTCGAACTCGATCCCTCCGACAAG
GTCAATGCCGGCGTGCTGCACGATGTCTGGCAGCGGATCGGGCACGACGATGACGACTGA

Upstream 100 bases:

>100_bases
GGCTTCATCTTCCACGATCCGAAGCCCTCGAGCTGCCAGTGCTCGGGCGGCACCGTGGAGGCGCCGAGGCAGAATCTGCA
TCAGCTCCGCGAATTCTGAA

Downstream 100 bases:

>100_bases
CATCGACGAGGCCCGCGACTGGCAAGGCAACGAGGTCGATTGCGCATCCTGCCCGCACCGCGACCTGCTGTCGGCCGGCC
GTTGCGAATTGAAGAAGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MPHVLHSELTMSGPEQSLLGGALLGAGLPAEAQRHLELAGRDYQSDAVAEQHLREAQALAPDHAAVLIGLYRFYFYKGRL
DEALRVAEVCLAKAARDNGLDLDWRKVRRSDAEFSSFAAILPRFYLFALKAYAYLRMRVGDIDEGHAAIEKLLELDPSDK
VNAGVLHDVWQRIGHDDDD

Sequences:

>Translated_179_residues
MPHVLHSELTMSGPEQSLLGGALLGAGLPAEAQRHLELAGRDYQSDAVAEQHLREAQALAPDHAAVLIGLYRFYFYKGRL
DEALRVAEVCLAKAARDNGLDLDWRKVRRSDAEFSSFAAILPRFYLFALKAYAYLRMRVGDIDEGHAAIEKLLELDPSDK
VNAGVLHDVWQRIGHDDDD
>Mature_178_residues
PHVLHSELTMSGPEQSLLGGALLGAGLPAEAQRHLELAGRDYQSDAVAEQHLREAQALAPDHAAVLIGLYRFYFYKGRLD
EALRVAEVCLAKAARDNGLDLDWRKVRRSDAEFSSFAAILPRFYLFALKAYAYLRMRVGDIDEGHAAIEKLLELDPSDKV
NAGVLHDVWQRIGHDDDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19938; Mature: 19807

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHVLHSELTMSGPEQSLLGGALLGAGLPAEAQRHLELAGRDYQSDAVAEQHLREAQALA
CCCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
PDHAAVLIGLYRFYFYKGRLDEALRVAEVCLAKAARDNGLDLDWRKVRRSDAEFSSFAAI
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHH
LPRFYLFALKAYAYLRMRVGDIDEGHAAIEKLLELDPSDKVNAGVLHDVWQRIGHDDDD
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PHVLHSELTMSGPEQSLLGGALLGAGLPAEAQRHLELAGRDYQSDAVAEQHLREAQALA
CCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
PDHAAVLIGLYRFYFYKGRLDEALRVAEVCLAKAARDNGLDLDWRKVRRSDAEFSSFAAI
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHH
LPRFYLFALKAYAYLRMRVGDIDEGHAAIEKLLELDPSDKVNAGVLHDVWQRIGHDDDD
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1885524 [H]