| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748035
Identifier: 86748035
GI number: 86748035
Start: 1046404
End: 1047672
Strand: Direct
Name: 86748035
Synonym: RPB_0909
Alternate gene names: NA
Gene position: 1046404-1047672 (Clockwise)
Preceding gene: 86748034
Following gene: 86748040
Centisome position: 19.63
GC content: 65.96
Gene sequence:
>1269_bases ATGCACCCCAACGATCCGCGCCTGCGCTCCTTCGTCGATGTGAAACCGGAATCGGACTTTCCGATCCAGAACCTTCCCTA CGGCGTGATCTCGACCGCGTCCGACCCTTCCCCGCGTGTCGGCGTCGCGATCGGCGATTTCGTGCTCGATCTCGCGGCGC TGCAGGCGGCCAAGCTGCTCGATCTGCCGGACGGCGTGTTCGCGCAATCGTCGATCAACGCCTTCATGGCGCTCGGGCTC GCAATGTGGAGCACGACACGGGCGCGGATCAGTGCGTTGCTGCGTCACGACAATCCCGAGCTGCGCGACGACGCCGCGCT GCGCGCGCGGGCGCTTGTTCCGATGAGTGACGCGAAGTTGCATCTGCCGCTGCGCGTCGAAGGCTTCACCGATTTCTACT CGTCGAAGGAACACGCCACCAATGTCGGCACGATGTTCCGCGACAAGACCAATCCGCTGCTGCCGAACTGGCTGCACATC CCGATCGGCTACAACGGCCGCGCCTCGACCGTCGTGGTCAGCGGCACCCAGATCCATCGTCCGCGCGGGCAGCTCAAGCC ACCATCCGCCGAGCTGCCGAGCTTCGGCCCGTGCAAGCGGCTCGATTTCGAGCTGGAGATCGGCGTCGTGATCGGGCAGC CGTCGGCGATGGGCACGACGCTGACCGAACAGCAGGCCGAGGAGATGATCTTCGGCTTCACGCTGTTGAACGACTGGAGC GCGCGCGACATCCAGCAATGGGAGTATGTGCCGCTCGGGCCGTTCCAGGCGAAAGCGTTCGCCACCTCGATCAGCCCGTG GATCGTGACGCGCGAGGCGCTGGAGCCGTTTCGGGTTCACGGGCCCACGCAGGATCCTGTGCCTCTGCCCTATCTGCAGC AGCAGGGGCCTAACAACTACGACATGGCGCTGGAAGTGAACCTGCGCACGCCGGCCATGAACGCGCCGGCGCGGATCAGC GCGACGAATTTCAAATACATGTACTGGTCGTCAGTGCAGCAGCTGGTGCACCATGCCTCCAGCGGCTGCGCGATGAATGT CGGCGACCTGCTCGGCTCCGGCACCGTCTCGGGGCCGGCGAAGGATCAGCTCGGCAGCCTGCTGGAGCTGAGCTGGAACG GCGCCGAACCGGTGCAGCTCCCCGGCGGCGAGACCCGCGGCTTCCTCGACGACGGCGATTCGCTGATCATGCGCGGCTGG TGCCAGGCCGACGGCTACCGCGTCGGTTTCGGCGAGGTCGAGGGGACGATTCTGGCGGCGAAGAGCTGA
Upstream 100 bases:
>100_bases GGCGCGCCAAGCTGCGCTTGCCGCGCCACCCTCTCCCCGCGCGCGGGGAGAGGGTACATCCGCCGACCCGATAGAACCGC CCAACGTCCCAGGACCCTTC
Downstream 100 bases:
>100_bases CGCTCTTTCCGCTCGCACGACTCTCGTTCGTCATTCCGGGGCGCTCACGTAGTGAGCGAACCCGGAATCCATAACCCCTG CACGGGTGTTCAGGAAGAGC
Product: fumarylacetoacetase
Products: acetoacetate; fumarate
Alternate protein names: Fumarylacetoacetate Hydrolase; Hydroxylase; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomerase; Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Hydrolase; LOW QUALITY PROTEIN Fumarylacetoacetase
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MHPNDPRLRSFVDVKPESDFPIQNLPYGVISTASDPSPRVGVAIGDFVLDLAALQAAKLLDLPDGVFAQSSINAFMALGL AMWSTTRARISALLRHDNPELRDDAALRARALVPMSDAKLHLPLRVEGFTDFYSSKEHATNVGTMFRDKTNPLLPNWLHI PIGYNGRASTVVVSGTQIHRPRGQLKPPSAELPSFGPCKRLDFELEIGVVIGQPSAMGTTLTEQQAEEMIFGFTLLNDWS ARDIQQWEYVPLGPFQAKAFATSISPWIVTREALEPFRVHGPTQDPVPLPYLQQQGPNNYDMALEVNLRTPAMNAPARIS ATNFKYMYWSSVQQLVHHASSGCAMNVGDLLGSGTVSGPAKDQLGSLLELSWNGAEPVQLPGGETRGFLDDGDSLIMRGW CQADGYRVGFGEVEGTILAAKS
Sequences:
>Translated_422_residues MHPNDPRLRSFVDVKPESDFPIQNLPYGVISTASDPSPRVGVAIGDFVLDLAALQAAKLLDLPDGVFAQSSINAFMALGL AMWSTTRARISALLRHDNPELRDDAALRARALVPMSDAKLHLPLRVEGFTDFYSSKEHATNVGTMFRDKTNPLLPNWLHI PIGYNGRASTVVVSGTQIHRPRGQLKPPSAELPSFGPCKRLDFELEIGVVIGQPSAMGTTLTEQQAEEMIFGFTLLNDWS ARDIQQWEYVPLGPFQAKAFATSISPWIVTREALEPFRVHGPTQDPVPLPYLQQQGPNNYDMALEVNLRTPAMNAPARIS ATNFKYMYWSSVQQLVHHASSGCAMNVGDLLGSGTVSGPAKDQLGSLLELSWNGAEPVQLPGGETRGFLDDGDSLIMRGW CQADGYRVGFGEVEGTILAAKS >Mature_422_residues MHPNDPRLRSFVDVKPESDFPIQNLPYGVISTASDPSPRVGVAIGDFVLDLAALQAAKLLDLPDGVFAQSSINAFMALGL AMWSTTRARISALLRHDNPELRDDAALRARALVPMSDAKLHLPLRVEGFTDFYSSKEHATNVGTMFRDKTNPLLPNWLHI PIGYNGRASTVVVSGTQIHRPRGQLKPPSAELPSFGPCKRLDFELEIGVVIGQPSAMGTTLTEQQAEEMIFGFTLLNDWS ARDIQQWEYVPLGPFQAKAFATSISPWIVTREALEPFRVHGPTQDPVPLPYLQQQGPNNYDMALEVNLRTPAMNAPARIS ATNFKYMYWSSVQQLVHHASSGCAMNVGDLLGSGTVSGPAKDQLGSLLELSWNGAEPVQLPGGETRGFLDDGDSLIMRGW CQADGYRVGFGEVEGTILAAKS
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557587, Length=414, Percent_Identity=52.8985507246377, Blast_Score=467, Evalue=1e-131, Organism=Caenorhabditis elegans, GI17568863, Length=419, Percent_Identity=54.4152744630072, Blast_Score=453, Evalue=1e-128, Organism=Drosophila melanogaster, GI24657182, Length=413, Percent_Identity=50.1210653753027, Blast_Score=413, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.2
Molecular weight: Translated: 46051; Mature: 46051
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPNDPRLRSFVDVKPESDFPIQNLPYGVISTASDPSPRVGVAIGDFVLDLAALQAAKLL CCCCCCCHHHEEECCCCCCCCCCCCCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHH DLPDGVFAQSSINAFMALGLAMWSTTRARISALLRHDNPELRDDAALRARALVPMSDAKL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEECCCCCCEE HLPLRVEGFTDFYSSKEHATNVGTMFRDKTNPLLPNWLHIPIGYNGRASTVVVSGTQIHR EEEEEECCCHHHHCCCHHHCHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEECCEEEC PRGQLKPPSAELPSFGPCKRLDFELEIGVVIGQPSAMGTTLTEQQAEEMIFGFTLLNDWS CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHEEEEEEECCCC ARDIQQWEYVPLGPFQAKAFATSISPWIVTREALEPFRVHGPTQDPVPLPYLQQQGPNNY CCCCCCCCCCCCCCCCHHHHHHCCCCCEEEHHHCCCEEECCCCCCCCCCCHHHHCCCCCC DMALEVNLRTPAMNAPARISATNFKYMYWSSVQQLVHHASSGCAMNVGDLLGSGTVSGPA CEEEEEEECCCCCCCCCEEEECCEEEEHHHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCC KDQLGSLLELSWNGAEPVQLPGGETRGFLDDGDSLIMRGWCQADGYRVGFGEVEGTILAA HHHHCCEEEEECCCCCCEECCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCEEEEE KS CC >Mature Secondary Structure MHPNDPRLRSFVDVKPESDFPIQNLPYGVISTASDPSPRVGVAIGDFVLDLAALQAAKLL CCCCCCCHHHEEECCCCCCCCCCCCCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHH DLPDGVFAQSSINAFMALGLAMWSTTRARISALLRHDNPELRDDAALRARALVPMSDAKL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEECCCCCCEE HLPLRVEGFTDFYSSKEHATNVGTMFRDKTNPLLPNWLHIPIGYNGRASTVVVSGTQIHR EEEEEECCCHHHHCCCHHHCHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEECCEEEC PRGQLKPPSAELPSFGPCKRLDFELEIGVVIGQPSAMGTTLTEQQAEEMIFGFTLLNDWS CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHEEEEEEECCCC ARDIQQWEYVPLGPFQAKAFATSISPWIVTREALEPFRVHGPTQDPVPLPYLQQQGPNNY CCCCCCCCCCCCCCCCHHHHHHCCCCCEEEHHHCCCEEECCCCCCCCCCCHHHHCCCCCC DMALEVNLRTPAMNAPARISATNFKYMYWSSVQQLVHHASSGCAMNVGDLLGSGTVSGPA CEEEEEEECCCCCCCCCEEEECCEEEEHHHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCC KDQLGSLLELSWNGAEPVQLPGGETRGFLDDGDSLIMRGWCQADGYRVGFGEVEGTILAA HHHHCCEEEEECCCCCCEECCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCEEEEE KS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-fumarylacetoacetate; H2O
Specific reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA