| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748032
Identifier: 86748032
GI number: 86748032
Start: 1043168
End: 1044118
Strand: Direct
Name: 86748032
Synonym: RPB_0906
Alternate gene names: NA
Gene position: 1043168-1044118 (Clockwise)
Preceding gene: 86748031
Following gene: 86748033
Centisome position: 19.57
GC content: 65.4
Gene sequence:
>951_bases ATGGCCAAGGGCTTCGCTTCCACCACCGACCTCGCCGAAAAGAAGGTGACGTTCTCCGAGATCGGCCCCGATCTCTACGC CTTCACCGCGGAGGGCGATCCGAATTCGGCGGTGATCGTCGGCGAGGACGGCTGCCTGGTGTTCGACGCGCAGGCGACGC CGGCGATGGCCGGCAAGGTGATCGAGCGCGTCCGCGCCGTCACCGACAAGCCGATCAAATACGTCGTGCTGTCGCATTAT CACGCGGTGCGCGTGCTCGGCGCTTCGGCCTATGGGGCCGAAGGCATCGTCGCCTCGCAGGAGACTTATCGCCTGATCGA AGAACGCGGCCAGCAGGATTGGGATTCCGAATACGGCCGGTTTCCGCGGCTGTTCCAGGACGCCGAGAGCATTCCCGGCC TGACCTGGCCGACGCTGACCTTCGACGGCGAGATGTCGATCTATCTCGGCAAGCGCGAGGTGCGGCTGATGCAGCTCGGC GCCGGCCACACCTCCGGCGACATCGTCGCCTGGGTGCCGGACGCCGAAGTGATGTTCACCGGCGACCTCGTCGAATATCA CTCGGCTTGCTATTGCGGCGACGCTTATCTGCGCGAATGGCCGATGACGCTGAACGAGATCCGCGAGTTCAATCCCAAGG CGATCGCGCCCGGCCGCGGTGACGCGCTGAAGGGGCTGGAGACCACCCGCGAGGCGATCGCTATGACGCGCGATTTCGTC GGCACGCTGTACGGCGCCGCCGAAATCTCGGTCGCTCGCGGCCGCAGCCTCAAGGAGACCTGGGACGCGACCCGCGAAAA GATGGACCCGAAATTCGCGAGCTTCGCGATCTACGAGCACTGCCTGCCGTTCAACGTCTCGCGCGCATTCGACGAGGCCT CGGGCATCGACGATCCGGTGATCTGGACCGCCGAGCGCGATCGCGAGATGTGGGCCGCGCTGCAAGGATAA
Upstream 100 bases:
>100_bases CCCCGGAATGACGACCTGAGAGACTTCGTCGAACGCGTATCAATCTGGCGCATCAATCAGACCAACACTGACCAACACTG ACCAACACCAAGGACACCAC
Downstream 100 bases:
>100_bases TCCGAACCACCCGCTTTCCCCAGCCATGCACCCACGTGTTGGAGGATGACATGAATATCAACGCCGCACCGCAGATCATT GGCCACGGTTCGCAGGGCGT
Product: Beta-lactamase-like
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Beta Lactamase; Beta-Lactamase-Like Protein; Beta-Lactamase; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase Class B; Cyclase; Metallo-Beta-Lactamase; Zn-Dependent Hydrolase; Hydrolase; Metallo-Beta-Lactamase Superfamily; Secreted Hydrolase; Beta Lactamase SoxH-Like Protein; Zn-Dependent Hydrolase Glyoxylase; Zinc-Dependent Hydrolase; Glyoxylase-Like Zinc-Dependent Hydrolase; SoxH Protein-Like; Metallo-Beta-Lactamase Domain-Containing Protein; Metallo-Beta-Lactamase Domain Protein; Zn-Dependent Hydrolase Glyoxylase Family Protein; Zn-Dependent Hydrolase Including Glyoxylase; Bifunctional HHDD Isomerase/Cyclase/Dehydrase; Beta-Lactamase Domain Containing Protein; Rhodanese Domain Protein
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MAKGFASTTDLAEKKVTFSEIGPDLYAFTAEGDPNSAVIVGEDGCLVFDAQATPAMAGKVIERVRAVTDKPIKYVVLSHY HAVRVLGASAYGAEGIVASQETYRLIEERGQQDWDSEYGRFPRLFQDAESIPGLTWPTLTFDGEMSIYLGKREVRLMQLG AGHTSGDIVAWVPDAEVMFTGDLVEYHSACYCGDAYLREWPMTLNEIREFNPKAIAPGRGDALKGLETTREAIAMTRDFV GTLYGAAEISVARGRSLKETWDATREKMDPKFASFAIYEHCLPFNVSRAFDEASGIDDPVIWTAERDREMWAALQG
Sequences:
>Translated_316_residues MAKGFASTTDLAEKKVTFSEIGPDLYAFTAEGDPNSAVIVGEDGCLVFDAQATPAMAGKVIERVRAVTDKPIKYVVLSHY HAVRVLGASAYGAEGIVASQETYRLIEERGQQDWDSEYGRFPRLFQDAESIPGLTWPTLTFDGEMSIYLGKREVRLMQLG AGHTSGDIVAWVPDAEVMFTGDLVEYHSACYCGDAYLREWPMTLNEIREFNPKAIAPGRGDALKGLETTREAIAMTRDFV GTLYGAAEISVARGRSLKETWDATREKMDPKFASFAIYEHCLPFNVSRAFDEASGIDDPVIWTAERDREMWAALQG >Mature_315_residues AKGFASTTDLAEKKVTFSEIGPDLYAFTAEGDPNSAVIVGEDGCLVFDAQATPAMAGKVIERVRAVTDKPIKYVVLSHYH AVRVLGASAYGAEGIVASQETYRLIEERGQQDWDSEYGRFPRLFQDAESIPGLTWPTLTFDGEMSIYLGKREVRLMQLGA GHTSGDIVAWVPDAEVMFTGDLVEYHSACYCGDAYLREWPMTLNEIREFNPKAIAPGRGDALKGLETTREAIAMTRDFVG TLYGAAEISVARGRSLKETWDATREKMDPKFASFAIYEHCLPFNVSRAFDEASGIDDPVIWTAERDREMWAALQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34938; Mature: 34806
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKGFASTTDLAEKKVTFSEIGPDLYAFTAEGDPNSAVIVGEDGCLVFDAQATPAMAGKV CCCCCCCHHHHHHHCCCHHHCCCCEEEEEECCCCCCEEEEECCCEEEEECCCCHHHHHHH IERVRAVTDKPIKYVVLSHYHAVRVLGASAYGAEGIVASQETYRLIEERGQQDWDSEYGR HHHHHHHCCCCEEEEEHHHHHEEEEECCCCCCCCCEEECHHHHHHHHHCCCCCHHHHHCC FPRLFQDAESIPGLTWPTLTFDGEMSIYLGKREVRLMQLGAGHTSGDIVAWVPDAEVMFT CHHHHHHHHHCCCCCCCEEEECCCEEEEECCCEEEEEEECCCCCCCCEEEECCCCCEEEE GDLVEYHSACYCGDAYLREWPMTLNEIREFNPKAIAPGRGDALKGLETTREAIAMTRDFV CCHHHHHCCEEECCHHHHHCCCCHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH GTLYGAAEISVARGRSLKETWDATREKMDPKFASFAIYEHCLPFNVSRAFDEASGIDDPV HHHHCHHEEEHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCE IWTAERDREMWAALQG EEECCCCHHHHHHCCC >Mature Secondary Structure AKGFASTTDLAEKKVTFSEIGPDLYAFTAEGDPNSAVIVGEDGCLVFDAQATPAMAGKV CCCCCCHHHHHHHCCCHHHCCCCEEEEEECCCCCCEEEEECCCEEEEECCCCHHHHHHH IERVRAVTDKPIKYVVLSHYHAVRVLGASAYGAEGIVASQETYRLIEERGQQDWDSEYGR HHHHHHHCCCCEEEEEHHHHHEEEEECCCCCCCCCEEECHHHHHHHHHCCCCCHHHHHCC FPRLFQDAESIPGLTWPTLTFDGEMSIYLGKREVRLMQLGAGHTSGDIVAWVPDAEVMFT CHHHHHHHHHCCCCCCCEEEECCCEEEEECCCEEEEEEECCCCCCCCEEEECCCCCEEEE GDLVEYHSACYCGDAYLREWPMTLNEIREFNPKAIAPGRGDALKGLETTREAIAMTRDFV CCHHHHHCCEEECCHHHHHCCCCHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH GTLYGAAEISVARGRSLKETWDATREKMDPKFASFAIYEHCLPFNVSRAFDEASGIDDPV HHHHCHHEEEHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCE IWTAERDREMWAALQG EEECCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA