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The map label for this gene is 86748021

Identifier: 86748021

GI number: 86748021

Start: 1030326

End: 1031294

Strand: Reverse

Name: 86748021

Synonym: RPB_0895

Alternate gene names: NA

Gene position: 1031294-1030326 (Counterclockwise)

Preceding gene: 86748022

Following gene: 86748020

Centisome position: 19.34

GC content: 70.18

Gene sequence:

>969_bases
ATGACCAAGCTGTGGATCGAGCTGGCCGCGCCGTCCCGCTGCAGATCGATGATCGTTTCGGCCGGCCCGCGCCGCGCCGC
GCGCATTGCGCCGAATCTCCCCATCGCCACCCGCGCGATTGCGGTTCTCGGATTCGCGGTTCTGGGATTCGCGAATGCGG
CGATCGCCGCCGAGAAAGCGGCGCCGCCGGCGCCGGGCGTGCAGGTCACCGTCGCCAAGGCGACCAACGCCTGCTTCTCC
GACATGGTGCGCGTCACCGGCTTCGTGGTGCCGCGCCGCGAGGCCGCGGTGATCGCCGACAGCGACGGCAAGGTCACCGA
GGTGCTGGTCCGCGAGGGCGATCTGGTCACCGACAATCAGGAACTGGTGCGCACCGTCGGCGCGACAGGGGCGAAATCGC
TGCGCGCGCCGGCCGCCGGACTGATCACCGAGTTGCGCACCGCCGTCGGTGCCCCGGCGTCGCCGCTCGCCGGCCCGGTG
GCGCGCATCGCCGTCGGCAACGAGATCGAGATCGAAGCCGAAGTGCCGAGCATCCACGCGCTCAAAGTCACGGCCGGCGC
GCCCGCGCGCATCGGCCGCGACGACGGGCCGGATCTGGTCGGCAAGGTGCGGCTGATCGCGCCGCAGATCGACCGCAAGA
CCCAGCTCGGCAAGGTCCGGATCTCGGTCACCAACACGCCGTCGCTGAAGATCGGGATGTTCGTCCGCGCCACCATCGAC
GCGCGGCGGAGCTGCGGCGTCGCGATCCCGCGATCGGCGATCGACCATCTCAAGGTGCAGGTGGTGAAGGGCGGCACCGT
CGAGACCCGCCGGGTCAAGGTCGGGCTGGTGTCCGACAGCAGCATCGAGATCCTCGACGGGGTCCGCGAAGGCGAGCTCG
TCGTCGCCGATTCCGGCACCTCGCTGCACGACGGCGACCCGATCAAGCCGATCTTCCTCGACGAATTCGACCGATCGCGA
GCACGCTAA

Upstream 100 bases:

>100_bases
CGCACCGGACGTTTGGTTTTCAGTGTTCGTCGATTCGAATCCGCTGAATGATCGAACTGATGAAGCGAACTTCCGAATCG
AGACCTGATCGAGTGCGCTC

Downstream 100 bases:

>100_bases
TGGGCCTCAACGTCTCCTCCTGGTCGATCCGGCATCCGCTGCCCTCGATCGTGTTCTCGATCATCCTGCTGGCGCTGGGC
TGGATCAGCTTCACCAAGCT

Product: secretion protein HlyD

Products: NA

Alternate protein names: Secretion Protein HlyD; Efflux Transporter RND Family MFP Subunit; HlyD Family Secretion Protein; RND Efflux Membrane Fusion Protein; Chemiosmotic Efflux System C Protein B; Transporter Lipoprotein Transmembrane; Protein Secretion Protein; Component Of Multidrug Efflux System; Signal Peptide; Membrane-Fusion Protein; HlyD-Family Secretion Protein; Efflux Protein; Transcriptional Regulator Fis Family; Secretion Protein; Transport Transmembrane Protein; Secretion HlyD Protein; Efflux Transporter Rnd Family Mfp Subunit; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MTKLWIELAAPSRCRSMIVSAGPRRAARIAPNLPIATRAIAVLGFAVLGFANAAIAAEKAAPPAPGVQVTVAKATNACFS
DMVRVTGFVVPRREAAVIADSDGKVTEVLVREGDLVTDNQELVRTVGATGAKSLRAPAAGLITELRTAVGAPASPLAGPV
ARIAVGNEIEIEAEVPSIHALKVTAGAPARIGRDDGPDLVGKVRLIAPQIDRKTQLGKVRISVTNTPSLKIGMFVRATID
ARRSCGVAIPRSAIDHLKVQVVKGGTVETRRVKVGLVSDSSIEILDGVREGELVVADSGTSLHDGDPIKPIFLDEFDRSR
AR

Sequences:

>Translated_322_residues
MTKLWIELAAPSRCRSMIVSAGPRRAARIAPNLPIATRAIAVLGFAVLGFANAAIAAEKAAPPAPGVQVTVAKATNACFS
DMVRVTGFVVPRREAAVIADSDGKVTEVLVREGDLVTDNQELVRTVGATGAKSLRAPAAGLITELRTAVGAPASPLAGPV
ARIAVGNEIEIEAEVPSIHALKVTAGAPARIGRDDGPDLVGKVRLIAPQIDRKTQLGKVRISVTNTPSLKIGMFVRATID
ARRSCGVAIPRSAIDHLKVQVVKGGTVETRRVKVGLVSDSSIEILDGVREGELVVADSGTSLHDGDPIKPIFLDEFDRSR
AR
>Mature_321_residues
TKLWIELAAPSRCRSMIVSAGPRRAARIAPNLPIATRAIAVLGFAVLGFANAAIAAEKAAPPAPGVQVTVAKATNACFSD
MVRVTGFVVPRREAAVIADSDGKVTEVLVREGDLVTDNQELVRTVGATGAKSLRAPAAGLITELRTAVGAPASPLAGPVA
RIAVGNEIEIEAEVPSIHALKVTAGAPARIGRDDGPDLVGKVRLIAPQIDRKTQLGKVRISVTNTPSLKIGMFVRATIDA
RRSCGVAIPRSAIDHLKVQVVKGGTVETRRVKVGLVSDSSIEILDGVREGELVVADSGTSLHDGDPIKPIFLDEFDRSRA
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33664; Mature: 33533

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLWIELAAPSRCRSMIVSAGPRRAARIAPNLPIATRAIAVLGFAVLGFANAAIAAEKA
CCEEEEEECCCHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
APPAPGVQVTVAKATNACFSDMVRVTGFVVPRREAAVIADSDGKVTEVLVREGDLVTDNQ
CCCCCCEEEEEEHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCEEEEEEECCCEEECCH
ELVRTVGATGAKSLRAPAAGLITELRTAVGAPASPLAGPVARIAVGNEIEIEAEVPSIHA
HHHHHHCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEEECCCEEE
LKVTAGAPARIGRDDGPDLVGKVRLIAPQIDRKTQLGKVRISVTNTPSLKIGMFVRATID
EEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEH
ARRSCGVAIPRSAIDHLKVQVVKGGTVETRRVKVGLVSDSSIEILDGVREGELVVADSGT
HHHCCCEECCHHHHCCEEEEEEECCCEEEEEEEEEEECCCCCHHHCCCCCCCEEEEECCC
SLHDGDPIKPIFLDEFDRSRAR
CCCCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure 
TKLWIELAAPSRCRSMIVSAGPRRAARIAPNLPIATRAIAVLGFAVLGFANAAIAAEKA
CEEEEEECCCHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
APPAPGVQVTVAKATNACFSDMVRVTGFVVPRREAAVIADSDGKVTEVLVREGDLVTDNQ
CCCCCCEEEEEEHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCEEEEEEECCCEEECCH
ELVRTVGATGAKSLRAPAAGLITELRTAVGAPASPLAGPVARIAVGNEIEIEAEVPSIHA
HHHHHHCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEEECCCEEE
LKVTAGAPARIGRDDGPDLVGKVRLIAPQIDRKTQLGKVRISVTNTPSLKIGMFVRATID
EEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEH
ARRSCGVAIPRSAIDHLKVQVVKGGTVETRRVKVGLVSDSSIEILDGVREGELVVADSGT
HHHCCCEECCHHHHCCEEEEEEECCCEEEEEEEEEEECCCCCHHHCCCCCCCEEEEECCC
SLHDGDPIKPIFLDEFDRSRAR
CCCCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA