Click here to switch to the map view.

The map label for this gene is yisS [H]

Identifier: 86747997

GI number: 86747997

Start: 998763

End: 999722

Strand: Reverse

Name: yisS [H]

Synonym: RPB_0871

Alternate gene names: 86747997

Gene position: 999722-998763 (Counterclockwise)

Preceding gene: 86747998

Following gene: 86747996

Centisome position: 18.75

GC content: 63.96

Gene sequence:

>960_bases
ATGGCCAAAGCGATCAAGGTCGCGCTCGCGGGTGCGGGCGCGTTCGGCATCAAACATCTCGACGGCATCAAGAACATCGA
CGGCGTCGAGGTGATCTCGCTGATCGGGCGACGGCTGGAGCCGACCCAGGAGGTCGCCGACAAATACGGCATCAAGCACG
TCTCGACCGAGCTCGCCGACGCGCTGGCGATCAAGGACGTCGACGCCGTCATCCTGTGCACGCCGACCCAGATGCACGCC
GAGCAGGGCATCGCCTGCATGAAGGCCGGCAAGCACGTCCAGATCGAGATTCCCCTGGCGGACTCGCTGGCCGATGCGCA
GGCGGTGGTCGACCTGCAGAAGACCACCGGGCTGGTGGCGATGTGCGGCCACACCCGGCGCTTCAACCCGAGCCATCAAT
ACGTCCACAACAAGATCACGGCCGGCGAGCTGAACATCCAGCAGATGGACGTGCAGACCTATTTCTTCCGCCGCACCAAC
ATGAACGCGCTCGGCCAGCCGCGGAGCTGGACCGACCACCTGTTGTGGCACCACGCCGCCCACACGGTGGATCTGTTCGC
CTATCAGGCGCGTTCGCCGATCGTGAAGGCGAATGCGGTGCAGGGGCCGATCAACCCGAATCTCGGCATTGCGATGGACA
TGTCGATCCAGCTCAAGGCCGCGAACGGCGCGATCTGCACGCTGTCGCTGTCGTTCAACAATGACGGGCCGCTCGGCACC
TTCTTCCGCTACATCGGCGACACCGGCACCTACATCGCCCGCTACGACGATCTGGTGAACGGCAAGGAAGAGAAGATCGA
CGTTTCCAAGGTCGACGTCTCGATGAACGGCATCGAACTGCAGGACCGCGAATTCTTCGCCGCGATCCGCGAAGGCCGCG
AGCCGAACGCCAGCGTCGCCCAGGTGCTGCCGTGCTATCAGGTGCTGCACGACCTCGACCTGCAGCTCGCAAAGGGCTGA

Upstream 100 bases:

>100_bases
GACGCTGCCGGCGGCCCCAAGCCCAAGGTCGCGCATCGTTTCTATCACGTCCCGGCCAGCAACACCGCGGTCGGGCATCT
GATTCTGGAGAACGCCTGAT

Downstream 100 bases:

>100_bases
CCGCCCGGCGGTCGAACGATCGTCATGCCCGGCAGCCCGGGCATGACGGCCGAGTGTGATGCTGATCACGACGGCGCGAA
ACCTTGTGTTTCGCCGGTGG

Product: oxidoreductase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MAKAIKVALAGAGAFGIKHLDGIKNIDGVEVISLIGRRLEPTQEVADKYGIKHVSTELADALAIKDVDAVILCTPTQMHA
EQGIACMKAGKHVQIEIPLADSLADAQAVVDLQKTTGLVAMCGHTRRFNPSHQYVHNKITAGELNIQQMDVQTYFFRRTN
MNALGQPRSWTDHLLWHHAAHTVDLFAYQARSPIVKANAVQGPINPNLGIAMDMSIQLKAANGAICTLSLSFNNDGPLGT
FFRYIGDTGTYIARYDDLVNGKEEKIDVSKVDVSMNGIELQDREFFAAIREGREPNASVAQVLPCYQVLHDLDLQLAKG

Sequences:

>Translated_319_residues
MAKAIKVALAGAGAFGIKHLDGIKNIDGVEVISLIGRRLEPTQEVADKYGIKHVSTELADALAIKDVDAVILCTPTQMHA
EQGIACMKAGKHVQIEIPLADSLADAQAVVDLQKTTGLVAMCGHTRRFNPSHQYVHNKITAGELNIQQMDVQTYFFRRTN
MNALGQPRSWTDHLLWHHAAHTVDLFAYQARSPIVKANAVQGPINPNLGIAMDMSIQLKAANGAICTLSLSFNNDGPLGT
FFRYIGDTGTYIARYDDLVNGKEEKIDVSKVDVSMNGIELQDREFFAAIREGREPNASVAQVLPCYQVLHDLDLQLAKG
>Mature_318_residues
AKAIKVALAGAGAFGIKHLDGIKNIDGVEVISLIGRRLEPTQEVADKYGIKHVSTELADALAIKDVDAVILCTPTQMHAE
QGIACMKAGKHVQIEIPLADSLADAQAVVDLQKTTGLVAMCGHTRRFNPSHQYVHNKITAGELNIQQMDVQTYFFRRTNM
NALGQPRSWTDHLLWHHAAHTVDLFAYQARSPIVKANAVQGPINPNLGIAMDMSIQLKAANGAICTLSLSFNNDGPLGTF
FRYIGDTGTYIARYDDLVNGKEEKIDVSKVDVSMNGIELQDREFFAAIREGREPNASVAQVLPCYQVLHDLDLQLAKG

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1789848, Length=207, Percent_Identity=28.9855072463768, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34842; Mature: 34711

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAIKVALAGAGAFGIKHLDGIKNIDGVEVISLIGRRLEPTQEVADKYGIKHVSTELAD
CCCEEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHH
ALAIKDVDAVILCTPTQMHAEQGIACMKAGKHVQIEIPLADSLADAQAVVDLQKTTGLVA
HHHHCCCCEEEEECCHHHHHHCCCHHHHCCCEEEEEECCCCCHHHHHHHEEHHHHCCEEE
MCGHTRRFNPSHQYVHNKITAGELNIQQMDVQTYFFRRTNMNALGQPRSWTDHLLWHHAA
ECCCCCCCCCCHHHHHCCCCCCCCEEEEEEHEEEEEEECCCCCCCCCCCHHHHHHHHHHH
HTVDLFAYQARSPIVKANAVQGPINPNLGIAMDMSIQLKAANGAICTLSLSFNNDGPLGT
HHHHHEEECCCCCCEEECCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEECCCCCHHH
FFRYIGDTGTYIARYDDLVNGKEEKIDVSKVDVSMNGIELQDREFFAAIREGREPNASVA
HHHHHCCCCCEEEEHHHHHCCCHHEEEEEEEEEEECCEEECHHHHHHHHHCCCCCCCHHH
QVLPCYQVLHDLDLQLAKG
HHHHHHHHHHHCCCEECCC
>Mature Secondary Structure 
AKAIKVALAGAGAFGIKHLDGIKNIDGVEVISLIGRRLEPTQEVADKYGIKHVSTELAD
CCEEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHH
ALAIKDVDAVILCTPTQMHAEQGIACMKAGKHVQIEIPLADSLADAQAVVDLQKTTGLVA
HHHHCCCCEEEEECCHHHHHHCCCHHHHCCCEEEEEECCCCCHHHHHHHEEHHHHCCEEE
MCGHTRRFNPSHQYVHNKITAGELNIQQMDVQTYFFRRTNMNALGQPRSWTDHLLWHHAA
ECCCCCCCCCCHHHHHCCCCCCCCEEEEEEHEEEEEEECCCCCCCCCCCHHHHHHHHHHH
HTVDLFAYQARSPIVKANAVQGPINPNLGIAMDMSIQLKAANGAICTLSLSFNNDGPLGT
HHHHHEEECCCCCCEEECCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEECCCCCHHH
FFRYIGDTGTYIARYDDLVNGKEEKIDVSKVDVSMNGIELQDREFFAAIREGREPNASVA
HHHHHCCCCCEEEEHHHHHCCCHHEEEEEEEEEEECCEEECHHHHHHHHHCCCCCCCHHH
QVLPCYQVLHDLDLQLAKG
HHHHHHHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]