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The map label for this gene is 86747959

Identifier: 86747959

GI number: 86747959

Start: 947980

End: 948861

Strand: Reverse

Name: 86747959

Synonym: RPB_0833

Alternate gene names: NA

Gene position: 948861-947980 (Counterclockwise)

Preceding gene: 86747964

Following gene: 86747958

Centisome position: 17.8

GC content: 68.48

Gene sequence:

>882_bases
ATGCATATCGTTTGCCCCCATTGTACGACATCCTATGCGATCGATCCGGCGAAACTGGGCGACACCGGCCGGACCGTGCG
CTGCTCCCGCTGCAAGGAGGTCTGGCTGGCGCGTCCGGAGGACGTGATCCAATCCGAGGCGCGGGTCGCCGCGATGACGG
CCGAGGACAAGCAGCCGACCGACGATCTCGCCGCTGATGCCGGCTGGGGCCTGACCGAGGACGACCAGGACGCCCCTGTC
GTCGACAGCCCGTCGATCGCGGCCGATCTTCCGACCAGCGAGGATCGCTCTCCTCCCGAGCCGGAACCGGACGCGGATGC
CGACATCGCGCCCAGCGCGACCCGCAAGCGCAGCAAGCGCTCGTTTGGCGCGCGCCGCCCGAAAGGGCTGAAGGCGATGC
TCGAGCCGCTCAAACAGGACCCGGTCGGCACGATCAAATCGGTGTTCACCGCCTCGACCGCCTGCGCGGCGTTCGGCGCG
CTGGCGCTGGGGCTGCTGATCTGGCGCGCCGACGTGGTGCGGCTGCTGCCGCAGACCGGGACGTTCTACCGGCTGGTCGG
GTTCGAGGTGAACCTGCGCTCGCTGGCGATCAAGGACGTCAAGATCACCCGCGAAACGGTGGAATCGAAGCCGGTGCTGG
TGATCGAAGGCATGATCATGGGGCTCGGCCGCAAGCCGGCGGATCTGCCGCGACTGCGCTTCGTGGTCCGCGACGAGCGC
GGCACCGAAATCTACGCCTGGAACGCCGTGCTCGAACAAACCGTGCTGCGCCCCGGCGAAGAGGCCTGGTTCCGGTCGCG
GCTGGCGTCGCCGCCCGCCGAAGCCCGTTTCATCGATGTGCGCTTCTTCAACCGGCGCGATATGATGGCCGGGCGCGCGT
GA

Upstream 100 bases:

>100_bases
ACGCCAAATGCCCGTGGGTCGGTTGTGGGGCGGTTATGGTTTCCGATTCGTTAACGGTCGCCGGATAGGATCGGGCAAGG
AACATAGCCAGCGATTCGTC

Downstream 100 bases:

>100_bases
CGCCGCCCGGATCCGTCCGCACGCCGGCCGACCGCACCACCGCGCAAACTAGGACCGAGTGATGGCGCGAATCCTGATCG
CCGACGACGAAGAATCGATG

Product: Zinc finger/thioredoxin putative

Products: NA

Alternate protein names: Zinc Finger-Domain-Containing Protein

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MHIVCPHCTTSYAIDPAKLGDTGRTVRCSRCKEVWLARPEDVIQSEARVAAMTAEDKQPTDDLAADAGWGLTEDDQDAPV
VDSPSIAADLPTSEDRSPPEPEPDADADIAPSATRKRSKRSFGARRPKGLKAMLEPLKQDPVGTIKSVFTASTACAAFGA
LALGLLIWRADVVRLLPQTGTFYRLVGFEVNLRSLAIKDVKITRETVESKPVLVIEGMIMGLGRKPADLPRLRFVVRDER
GTEIYAWNAVLEQTVLRPGEEAWFRSRLASPPAEARFIDVRFFNRRDMMAGRA

Sequences:

>Translated_293_residues
MHIVCPHCTTSYAIDPAKLGDTGRTVRCSRCKEVWLARPEDVIQSEARVAAMTAEDKQPTDDLAADAGWGLTEDDQDAPV
VDSPSIAADLPTSEDRSPPEPEPDADADIAPSATRKRSKRSFGARRPKGLKAMLEPLKQDPVGTIKSVFTASTACAAFGA
LALGLLIWRADVVRLLPQTGTFYRLVGFEVNLRSLAIKDVKITRETVESKPVLVIEGMIMGLGRKPADLPRLRFVVRDER
GTEIYAWNAVLEQTVLRPGEEAWFRSRLASPPAEARFIDVRFFNRRDMMAGRA
>Mature_293_residues
MHIVCPHCTTSYAIDPAKLGDTGRTVRCSRCKEVWLARPEDVIQSEARVAAMTAEDKQPTDDLAADAGWGLTEDDQDAPV
VDSPSIAADLPTSEDRSPPEPEPDADADIAPSATRKRSKRSFGARRPKGLKAMLEPLKQDPVGTIKSVFTASTACAAFGA
LALGLLIWRADVVRLLPQTGTFYRLVGFEVNLRSLAIKDVKITRETVESKPVLVIEGMIMGLGRKPADLPRLRFVVRDER
GTEIYAWNAVLEQTVLRPGEEAWFRSRLASPPAEARFIDVRFFNRRDMMAGRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32272; Mature: 32272

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIVCPHCTTSYAIDPAKLGDTGRTVRCSRCKEVWLARPEDVIQSEARVAAMTAEDKQPT
CEEECCCCCCCCCCCHHHCCCCCCEEEHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCC
DDLAADAGWGLTEDDQDAPVVDSPSIAADLPTSEDRSPPEPEPDADADIAPSATRKRSKR
HHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
SFGARRPKGLKAMLEPLKQDPVGTIKSVFTASTACAAFGALALGLLIWRADVVRLLPQTG
HHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TFYRLVGFEVNLRSLAIKDVKITRETVESKPVLVIEGMIMGLGRKPADLPRLRFVVRDER
CEEEEEEEEEEHHHEEEHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCCCEEEEEECCC
GTEIYAWNAVLEQTVLRPGEEAWFRSRLASPPAEARFIDVRFFNRRDMMAGRA
CCEEEEHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEECCHHHCCCCC
>Mature Secondary Structure
MHIVCPHCTTSYAIDPAKLGDTGRTVRCSRCKEVWLARPEDVIQSEARVAAMTAEDKQPT
CEEECCCCCCCCCCCHHHCCCCCCEEEHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCC
DDLAADAGWGLTEDDQDAPVVDSPSIAADLPTSEDRSPPEPEPDADADIAPSATRKRSKR
HHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
SFGARRPKGLKAMLEPLKQDPVGTIKSVFTASTACAAFGALALGLLIWRADVVRLLPQTG
HHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TFYRLVGFEVNLRSLAIKDVKITRETVESKPVLVIEGMIMGLGRKPADLPRLRFVVRDER
CEEEEEEEEEEHHHEEEHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCCCEEEEEECCC
GTEIYAWNAVLEQTVLRPGEEAWFRSRLASPPAEARFIDVRFFNRRDMMAGRA
CCEEEEHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEECCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA