Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86747908
Identifier: 86747908
GI number: 86747908
Start: 875570
End: 876079
Strand: Reverse
Name: 86747908
Synonym: RPB_0782
Alternate gene names: NA
Gene position: 876079-875570 (Counterclockwise)
Preceding gene: 86747913
Following gene: 86747897
Centisome position: 16.43
GC content: 68.04
Gene sequence:
>510_bases ATGACAACATTGACTTGGACCGACGAGCGCGTCGAGCAGTTGAAGAAGCTATGGGAAGGCGGGCTGTCGGCGAGTCAAAT TGCCGCGGAGCTCGGCAACGTGACGCGCAACGCCGTGATCGGCAAGGTCCATCGGCTCGGCCTGTCGGGCCGGGCCAAGA GCCCGTCCTCGGCGGCGCCGCGCCAGCGCAAGGCGCGCCCCGCCCAGCACATGATGCGGGTGACGCGGCCGGTGGCGCGC GGCAATACCGCGCTGGCGCATGTGTTCGAGGTCGAGGCCGAGCCCGATCCGATCGCGATCGACAACGTCGTACCGATGAA CCAGCGGCTGTCGCTGCTCGAACTCAACGAAGCCACCTGCCACTGGCCGGTCGGCGATCCGTCGAGCCCCGAGTTCTTCT TCTGCGGCGGCAAATCGCTGCCCGGCCTGCCGTATTGCGCGCATCACTCGCGCATCGCCTATCAGCCGGTCGGTGACCGC CGGCGGCAGGCGCCGAAGACGACGCGGTAA
Upstream 100 bases:
>100_bases CGGCGAGGGTTAAGGGATTCTGACGGCACGACAATTGACGACCTCGCAGCCGCGGTTCGGCGCTGGACCAGTACCGCGCG GCAGGAAGGGATTTAAGACG
Downstream 100 bases:
>100_bases TCACGCCTCTGCGCGGGGCAATGCCGCCACCGCGCGGCACCCGTTCTGGCCCGGAACGCGCTGCGAGCGTTTCTGCCCGG CACGCGCTCCCGACGGTCCT
Product: GcrA cell cycle regulator
Products: NA
Alternate protein names: Global Cell Cycle Regulator GcrA; GcrA Cell Cycle Regulator Superfamily; Cell Cycle Regulator GcrA; Gcra Cell Cycle Regulator; GcrA-Like Regulator
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MTTLTWTDERVEQLKKLWEGGLSASQIAAELGNVTRNAVIGKVHRLGLSGRAKSPSSAAPRQRKARPAQHMMRVTRPVAR GNTALAHVFEVEAEPDPIAIDNVVPMNQRLSLLELNEATCHWPVGDPSSPEFFFCGGKSLPGLPYCAHHSRIAYQPVGDR RRQAPKTTR
Sequences:
>Translated_169_residues MTTLTWTDERVEQLKKLWEGGLSASQIAAELGNVTRNAVIGKVHRLGLSGRAKSPSSAAPRQRKARPAQHMMRVTRPVAR GNTALAHVFEVEAEPDPIAIDNVVPMNQRLSLLELNEATCHWPVGDPSSPEFFFCGGKSLPGLPYCAHHSRIAYQPVGDR RRQAPKTTR >Mature_168_residues TTLTWTDERVEQLKKLWEGGLSASQIAAELGNVTRNAVIGKVHRLGLSGRAKSPSSAAPRQRKARPAQHMMRVTRPVARG NTALAHVFEVEAEPDPIAIDNVVPMNQRLSLLELNEATCHWPVGDPSSPEFFFCGGKSLPGLPYCAHHSRIAYQPVGDRR RQAPKTTR
Specific function: Unknown
COG id: COG5352
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18626; Mature: 18494
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLTWTDERVEQLKKLWEGGLSASQIAAELGNVTRNAVIGKVHRLGLSGRAKSPSSAAP CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RQRKARPAQHMMRVTRPVARGNTALAHVFEVEAEPDPIAIDNVVPMNQRLSLLELNEATC HHHHCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEECCCCCCCCCCEEEEECCCEE HWPVGDPSSPEFFFCGGKSLPGLPYCAHHSRIAYQPVGDRRRQAPKTTR ECCCCCCCCCCEEEECCCCCCCCCEECCCCCEEECCCCHHHHCCCCCCC >Mature Secondary Structure TTLTWTDERVEQLKKLWEGGLSASQIAAELGNVTRNAVIGKVHRLGLSGRAKSPSSAAP CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RQRKARPAQHMMRVTRPVARGNTALAHVFEVEAEPDPIAIDNVVPMNQRLSLLELNEATC HHHHCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEECCCCCCCCCCEEEEECCCEE HWPVGDPSSPEFFFCGGKSLPGLPYCAHHSRIAYQPVGDRRRQAPKTTR ECCCCCCCCCCEEEECCCCCCCCCEECCCCCEEECCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA