Click here to switch to the map view.

The map label for this gene is 86747835

Identifier: 86747835

GI number: 86747835

Start: 795472

End: 795933

Strand: Reverse

Name: 86747835

Synonym: RPB_0709

Alternate gene names: NA

Gene position: 795933-795472 (Counterclockwise)

Preceding gene: 86747840

Following gene: 86747834

Centisome position: 14.93

GC content: 61.9

Gene sequence:

>462_bases
ATGTACGACGTCTTCAAGTTCCTCCACGTCGTCGGCGTGGTCGTGCTGGTCGGCAACGTCACCATCACCGCGTTCTGGAA
GGCGTTCTCCGATCTCACGCGCGATCCGAAGATCGTCGCCCACGCGCAGCGCGGCGTCACGGTGTCGGATTTCATCTTCA
CCGTGATCGGCATCGTGCTGGTGATGGTCGGCGGCTACGGCGCCGCGATCGTCAAGGATATTCCGCTGTTCTCCTCGTTC
TGGCTGGTCTCGGGCCAGATCCTGTTCGCGATCTCCGGAATGATGTGGCTCGGCATCCTGATTCCGATCCAGATCCGGCA
GGCGCGGCTCGCCCGCAGCTTTGCGCAGAGCAATGACATTCCGGAGCAATATTGGCGCGATGCCCGAACCTGGCTGGTCT
GGGGCATCATCGCCACCGTGCCGCTGGTGGCGGCGATCTTCGTCATGGTGGTGAAGTTCTGA

Upstream 100 bases:

>100_bases
GGAAAACCCCGAGCAGAACCTCGCCCGCCGCGAATGGCGGCGCCCGGTTGCGCGGTTCGCCGACCGGAAGTCCGGACCGG
AGTGGCAGTTGTCAGACCAG

Downstream 100 bases:

>100_bases
CCCGCGGCCGGGCATTCGGCCGTCCGTCGTAGCGATCGGGAAAGCCGCTGATGTCCGTTACAGAGATCGCGCCGTCCGTC
GATCGCGAGGCGCTGCTGCC

Product: integral membrane protein-like

Products: NA

Alternate protein names: Integral Membrane Protein-Like Protein

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MYDVFKFLHVVGVVVLVGNVTITAFWKAFSDLTRDPKIVAHAQRGVTVSDFIFTVIGIVLVMVGGYGAAIVKDIPLFSSF
WLVSGQILFAISGMMWLGILIPIQIRQARLARSFAQSNDIPEQYWRDARTWLVWGIIATVPLVAAIFVMVVKF

Sequences:

>Translated_153_residues
MYDVFKFLHVVGVVVLVGNVTITAFWKAFSDLTRDPKIVAHAQRGVTVSDFIFTVIGIVLVMVGGYGAAIVKDIPLFSSF
WLVSGQILFAISGMMWLGILIPIQIRQARLARSFAQSNDIPEQYWRDARTWLVWGIIATVPLVAAIFVMVVKF
>Mature_153_residues
MYDVFKFLHVVGVVVLVGNVTITAFWKAFSDLTRDPKIVAHAQRGVTVSDFIFTVIGIVLVMVGGYGAAIVKDIPLFSSF
WLVSGQILFAISGMMWLGILIPIQIRQARLARSFAQSNDIPEQYWRDARTWLVWGIIATVPLVAAIFVMVVKF

Specific function: Unknown

COG id: COG5528

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17062; Mature: 17062

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDVFKFLHVVGVVVLVGNVTITAFWKAFSDLTRDPKIVAHAQRGVTVSDFIFTVIGIVL
CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHH
VMVGGYGAAIVKDIPLFSSFWLVSGQILFAISGMMWLGILIPIQIRQARLARSFAQSNDI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PEQYWRDARTWLVWGIIATVPLVAAIFVMVVKF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYDVFKFLHVVGVVVLVGNVTITAFWKAFSDLTRDPKIVAHAQRGVTVSDFIFTVIGIVL
CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHH
VMVGGYGAAIVKDIPLFSSFWLVSGQILFAISGMMWLGILIPIQIRQARLARSFAQSNDI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PEQYWRDARTWLVWGIIATVPLVAAIFVMVVKF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA