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The map label for this gene is oxaA [H]

Identifier: 86747809

GI number: 86747809

Start: 766782

End: 768671

Strand: Reverse

Name: oxaA [H]

Synonym: RPB_0683

Alternate gene names: 86747809

Gene position: 768671-766782 (Counterclockwise)

Preceding gene: 86747810

Following gene: 86747808

Centisome position: 14.42

GC content: 64.07

Gene sequence:

>1890_bases
ATGAGCGACAATCGCAACACCATCCTCGCCGTGATTCTGTCGGGCCTCGTGCTGCTCGGCTGGCAGTACTTCTTCAACAT
CCCGCAGATGGAGAAGCAGCGCGCCGCCCAGCAGGCGCAACAGCAGCAGGACGCGGCCAAGCAGCCGACCCAGCAGGCCC
CGGCCGCGACCACGCCGGGTGCGCCGAACGCTCCGGCGGCGTCGGCAGCGCCCGGTGCTCCCGGAGCCCCAGGCGCGCCG
GCAGCCCGGCAGTCCGGCAATGCGCCGGTGGTCAGCCGCGAGGCGGCGATCGCGGCGTCGCCGCGGATCAAGGTCGAAAC
CCCGCGCCTCGACGGCACGATTTCGCTGAAGGGCGCGCGGATCGACGATCTGTCGCTGACCCAGTTGCGCGAGACGGTCG
ACCCGAAATCGCCGCCGATCCATCTGTTCTCGCCGTCCGGCGGCGCCAATCCCTATTATGCCGAATTCGGCTGGGTCGGC
GCGGCGGGCTCCAACGTCAAGCTGCCCGACCAGAACACGATGTGGCAGCAGCAAGGCTCCGGCGCGCTGACGCCGAGCAG
CCCGATCACGCTGACATGGGACAACGGCGAAGGTCTCACCTTCCGCCGCCAGATCGCGGTCGACGACCGCTATCTGTTCA
CCGTGAAGGACGACGTCACCAATGTCGGCAGCAGCCCGGTGACGCTGTACCCCTACGCGCTGATCTCGCGCCATGGCACG
CCGCATGTCGAGGGCTACTACATTCTGCATGAAGGCCTGATCGGCTATCTCGGCGAGCACGGCCTGCAGGAATACGGTTA
CGCCAAGATCGACGAAGCCAAGACGGTGGGCTTCAAGGCGACCAATGCCTGGATGGGCATCACCGACAAATACTGGGCCT
CGGCGCTGCTGCCGGACACCAATGCGCAGCTCCAGGCGCGGTTCTCGTCGAATCAGGTCGGCGCCACCCGCACCTATCAG
ACCGACTATCTCGAAGACGCCAAGACGGTGCCGATCGGCGGCACCGTGACGGCCAACGCCCGGCTGTTCGCCGGCGCCAA
GGAAGCGCGCGTCGTCGGCATCAACTTCCCGTTCGCGGGCCTCGGCGGCTACAATCAGCAGCTCGGGCTGAACCATTTCG
ACCTGCTGATCGACTGGGGCTGGTTCTACTTCATCACCAAGCCGATGTTCCTGGCGCTCGACTTCTTCTTCCATCTGGTC
GGGAATTTCGGCGTCGCCATCCTGCTGGTGACGGTGCTGATCAAGGTGCTGTTCCTGCCGCTGGCGAACAAATCCTACGC
CTCGATGGCCAAGATGAAGGCGATCCAGCCGCAGCTGCTCGCGCTGAAGGAGCGTCATCCGGACGACAAGGCGAAGCAGC
AGCAGGAGATGATGGAGATCTACCGCAAGGAGAAGATCAATCCGGTCGCCGGCTGTCTGCCGGTGCTGCTGCAGATCCCG
GTGTTCTTCTCGCTGTACAAGGTGCTGTTCGTCACCATCGAAATGCGCCACGCGCCGTTCTTCGGCTGGATCCACGATCT
GTCGGCGGCGGACCCGACCAATCTGTTCAATCTGTTCGGACTGCTGCCGTTCGATCCGACCGCGATCCCGGTGCTCGGCC
ACTATTTGGTGCTCGGCGTCTGGCCGCTGGTGATGGGCTTCACGATGTGGTTCCAGATGAAGCTCAATCCGCAGCCGCCG
GATCCGACGCAGCAGATGATCTTCGCCTGGATGCCGGTGATCTTCACCTTCATGCTGGCGCACTTCCCGGCCGGTCTGGT
GATCTACTGGGCCTGGAACAACCTGCTGTCGGTGATCCAGCAGGCCTACATCATGCGCCGCAACGGCGTGAAGGTGGAGC
TGTTCGACAATCTGAGAGCGGCCTTCACGAAGAAGAAGAAAGCGGCATAG

Upstream 100 bases:

>100_bases
CTGAGCCGCGACTTTGCTGTCATGCTCGGCGATCTGCGCTCCGCGCTCGACCGCATTGCGCGGCGGTCGTCGAAACCGGA
TTGAAGCGAGACCTGACCCG

Downstream 100 bases:

>100_bases
AGTCCGCTGCCCGACACCGCAGCAACACCACGTCATGGCCGGGCTCGTCCCGGCCATCCACGTTTTGGGGCGTAGGATGA
TCCGACGACATCAGAGCGGC

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 629; Mature: 628

Protein sequence:

>629_residues
MSDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAQQAQQQQDAAKQPTQQAPAATTPGAPNAPAASAAPGAPGAPGAP
AARQSGNAPVVSREAAIAASPRIKVETPRLDGTISLKGARIDDLSLTQLRETVDPKSPPIHLFSPSGGANPYYAEFGWVG
AAGSNVKLPDQNTMWQQQGSGALTPSSPITLTWDNGEGLTFRRQIAVDDRYLFTVKDDVTNVGSSPVTLYPYALISRHGT
PHVEGYYILHEGLIGYLGEHGLQEYGYAKIDEAKTVGFKATNAWMGITDKYWASALLPDTNAQLQARFSSNQVGATRTYQ
TDYLEDAKTVPIGGTVTANARLFAGAKEARVVGINFPFAGLGGYNQQLGLNHFDLLIDWGWFYFITKPMFLALDFFFHLV
GNFGVAILLVTVLIKVLFLPLANKSYASMAKMKAIQPQLLALKERHPDDKAKQQQEMMEIYRKEKINPVAGCLPVLLQIP
VFFSLYKVLFVTIEMRHAPFFGWIHDLSAADPTNLFNLFGLLPFDPTAIPVLGHYLVLGVWPLVMGFTMWFQMKLNPQPP
DPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNLLSVIQQAYIMRRNGVKVELFDNLRAAFTKKKKAA

Sequences:

>Translated_629_residues
MSDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAQQAQQQQDAAKQPTQQAPAATTPGAPNAPAASAAPGAPGAPGAP
AARQSGNAPVVSREAAIAASPRIKVETPRLDGTISLKGARIDDLSLTQLRETVDPKSPPIHLFSPSGGANPYYAEFGWVG
AAGSNVKLPDQNTMWQQQGSGALTPSSPITLTWDNGEGLTFRRQIAVDDRYLFTVKDDVTNVGSSPVTLYPYALISRHGT
PHVEGYYILHEGLIGYLGEHGLQEYGYAKIDEAKTVGFKATNAWMGITDKYWASALLPDTNAQLQARFSSNQVGATRTYQ
TDYLEDAKTVPIGGTVTANARLFAGAKEARVVGINFPFAGLGGYNQQLGLNHFDLLIDWGWFYFITKPMFLALDFFFHLV
GNFGVAILLVTVLIKVLFLPLANKSYASMAKMKAIQPQLLALKERHPDDKAKQQQEMMEIYRKEKINPVAGCLPVLLQIP
VFFSLYKVLFVTIEMRHAPFFGWIHDLSAADPTNLFNLFGLLPFDPTAIPVLGHYLVLGVWPLVMGFTMWFQMKLNPQPP
DPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNLLSVIQQAYIMRRNGVKVELFDNLRAAFTKKKKAA
>Mature_628_residues
SDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAQQAQQQQDAAKQPTQQAPAATTPGAPNAPAASAAPGAPGAPGAPA
ARQSGNAPVVSREAAIAASPRIKVETPRLDGTISLKGARIDDLSLTQLRETVDPKSPPIHLFSPSGGANPYYAEFGWVGA
AGSNVKLPDQNTMWQQQGSGALTPSSPITLTWDNGEGLTFRRQIAVDDRYLFTVKDDVTNVGSSPVTLYPYALISRHGTP
HVEGYYILHEGLIGYLGEHGLQEYGYAKIDEAKTVGFKATNAWMGITDKYWASALLPDTNAQLQARFSSNQVGATRTYQT
DYLEDAKTVPIGGTVTANARLFAGAKEARVVGINFPFAGLGGYNQQLGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVG
NFGVAILLVTVLIKVLFLPLANKSYASMAKMKAIQPQLLALKERHPDDKAKQQQEMMEIYRKEKINPVAGCLPVLLQIPV
FFSLYKVLFVTIEMRHAPFFGWIHDLSAADPTNLFNLFGLLPFDPTAIPVLGHYLVLGVWPLVMGFTMWFQMKLNPQPPD
PTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNLLSVIQQAYIMRRNGVKVELFDNLRAAFTKKKKAA

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=521, Percent_Identity=29.5585412667946, Blast_Score=225, Evalue=7e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 69397; Mature: 69266

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAQQAQQQQDAAKQPTQQAPAATTPG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCC
APNAPAASAAPGAPGAPGAPAARQSGNAPVVSREAAIAASPRIKVETPRLDGTISLKGAR
CCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEECCHHEECCCCEEEECCCCCCEEEECCCC
IDDLSLTQLRETVDPKSPPIHLFSPSGGANPYYAEFGWVGAAGSNVKLPDQNTMWQQQGS
CCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCEEECCCEECCCCCCCCCCCCCHHHHCCC
GALTPSSPITLTWDNGEGLTFRRQIAVDDRYLFTVKDDVTNVGSSPVTLYPYALISRHGT
CCCCCCCCEEEEEECCCCCEEEEEEEECCEEEEEEECHHHCCCCCCEEEEHHHHHHCCCC
PHVEGYYILHEGLIGYLGEHGLQEYGYAKIDEAKTVGFKATNAWMGITDKYWASALLPDT
CCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCEECCCHHHHHHHCCCCC
NAQLQARFSSNQVGATRTYQTDYLEDAKTVPIGGTVTANARLFAGAKEARVVGINFPFAG
CCCEEEEECCCCCCCCEEECHHHHCCCCCCCCCCEEECCCEEEECCCCCEEEEEECCCCC
LGGYNQQLGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLIKVLFLP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LANKSYASMAKMKAIQPQLLALKERHPDDKAKQQQEMMEIYRKEKINPVAGCLPVLLQIP
CCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VFFSLYKVLFVTIEMRHAPFFGWIHDLSAADPTNLFNLFGLLPFDPTAIPVLGHYLVLGV
HHHHHHHHHHHHEECCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
WPLVMGFTMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNLLSVIQ
HHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
QAYIMRRNGVKVELFDNLRAAFTKKKKAA
HHHHHHCCCCEEEEHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAQQAQQQQDAAKQPTQQAPAATTPG
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCC
APNAPAASAAPGAPGAPGAPAARQSGNAPVVSREAAIAASPRIKVETPRLDGTISLKGAR
CCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEECCHHEECCCCEEEECCCCCCEEEECCCC
IDDLSLTQLRETVDPKSPPIHLFSPSGGANPYYAEFGWVGAAGSNVKLPDQNTMWQQQGS
CCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCEEECCCEECCCCCCCCCCCCCHHHHCCC
GALTPSSPITLTWDNGEGLTFRRQIAVDDRYLFTVKDDVTNVGSSPVTLYPYALISRHGT
CCCCCCCCEEEEEECCCCCEEEEEEEECCEEEEEEECHHHCCCCCCEEEEHHHHHHCCCC
PHVEGYYILHEGLIGYLGEHGLQEYGYAKIDEAKTVGFKATNAWMGITDKYWASALLPDT
CCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCEECCCHHHHHHHCCCCC
NAQLQARFSSNQVGATRTYQTDYLEDAKTVPIGGTVTANARLFAGAKEARVVGINFPFAG
CCCEEEEECCCCCCCCEEECHHHHCCCCCCCCCCEEECCCEEEECCCCCEEEEEECCCCC
LGGYNQQLGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLIKVLFLP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LANKSYASMAKMKAIQPQLLALKERHPDDKAKQQQEMMEIYRKEKINPVAGCLPVLLQIP
CCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VFFSLYKVLFVTIEMRHAPFFGWIHDLSAADPTNLFNLFGLLPFDPTAIPVLGHYLVLGV
HHHHHHHHHHHHEECCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
WPLVMGFTMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNLLSVIQ
HHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
QAYIMRRNGVKVELFDNLRAAFTKKKKAA
HHHHHHCCCCEEEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]