Click here to switch to the map view.

The map label for this gene is ugpA [H]

Identifier: 86747774

GI number: 86747774

Start: 733757

End: 734638

Strand: Direct

Name: ugpA [H]

Synonym: RPB_0648

Alternate gene names: 86747774

Gene position: 733757-734638 (Clockwise)

Preceding gene: 86747773

Following gene: 86747775

Centisome position: 13.76

GC content: 64.51

Gene sequence:

>882_bases
ATGCTGAAGAACGCCGTCTTTCAATCCAAATTCCTGCCCTATTGGCTGGTGCTGCCGCAGCTCGCGGTGGTGCTGGTGTT
CTTCTATTGGCCGGCGCTGCAGGCAGTGGCGCAGTCGTTCCTGCTGCAGGATGCGTTCGGGCTGTCGACCACTTTCGTCT
GGTTCGAGAATTACCAGGAGCTGCTGGCCGACCCGGACTACTTCAGCGCCATCCTGCGCACCTTCGTGTTTTCGGTCCTG
ATCGCGGTGTCGTCGCTGTCGCTGGCGCTGCTGCTGGCGGTGATGGCCGACCGGCCGCTGCGCGGCTCGATGTTCTATCG
CACCCTGCTGATCTGGCCCTACGCGGTGGCGCCGCCGGTGGTCGGCGTGCTGTGGATCTTCATGCTCAACCCCTCGCTCG
GCGTGATCGCCCACGGCCTGCGCGCGATCGGCGTCGACTGGAACCCGCTGCTCGACGGCAACCAGGCCGCGACGCTGATC
ATCCTCGCCGCGGCGTGGAAGCAGATCTCCTACAATTTCCTGTTCTTCCTCGCCGGGCTGCAGGCGATCCCGGGAAGCGT
CATCGAGGCGGCGGCGATCGACGGCGCGCGGCCGATGCGGCGGTTCTGGACCATCGTGTTCCCGCTGCTGTCGCCGACGA
TCTTCTTCCTGATCGTCGTCAACATCGTCTACGCCTTCTTCGAAACCTTCGGCATCATCGACACCATGACCCGCGGCGGC
CCGGCCAAGGCCACCGAGACGCTGGTCTACAAGGTCTACAGCGACGGCCTGCTCGGCGGCAATCTCGGCAGCTCGGCGGC
GCAGTCGGTGATCCTGATGGGCATCGTCATCGCGCTCACCGCGTTCCAGTTCCGCTTCGTCGAACGCAAGGTGAACTACT
GA

Upstream 100 bases:

>100_bases
ATCATCGTAGACGCCGTGCGCGCGGCGCCCCCCACCCCCGACCCCTCCCCGCCGCAAGAGCGGGGGGAGGGGAGCTGATC
ATGCTCAAGCAGTCCGCACG

Downstream 100 bases:

>100_bases
TGGTCGAGCACCGCAGATTCGGAAACCTGCTGCCGCATCTGATCCTGTGGGTCGGCGTGCTGATCGTCGCGTTTCCGGTC
TACATCGCCTTCATCGCCTC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MLKNAVFQSKFLPYWLVLPQLAVVLVFFYWPALQAVAQSFLLQDAFGLSTTFVWFENYQELLADPDYFSAILRTFVFSVL
IAVSSLSLALLLAVMADRPLRGSMFYRTLLIWPYAVAPPVVGVLWIFMLNPSLGVIAHGLRAIGVDWNPLLDGNQAATLI
ILAAAWKQISYNFLFFLAGLQAIPGSVIEAAAIDGARPMRRFWTIVFPLLSPTIFFLIVVNIVYAFFETFGIIDTMTRGG
PAKATETLVYKVYSDGLLGGNLGSSAAQSVILMGIVIALTAFQFRFVERKVNY

Sequences:

>Translated_293_residues
MLKNAVFQSKFLPYWLVLPQLAVVLVFFYWPALQAVAQSFLLQDAFGLSTTFVWFENYQELLADPDYFSAILRTFVFSVL
IAVSSLSLALLLAVMADRPLRGSMFYRTLLIWPYAVAPPVVGVLWIFMLNPSLGVIAHGLRAIGVDWNPLLDGNQAATLI
ILAAAWKQISYNFLFFLAGLQAIPGSVIEAAAIDGARPMRRFWTIVFPLLSPTIFFLIVVNIVYAFFETFGIIDTMTRGG
PAKATETLVYKVYSDGLLGGNLGSSAAQSVILMGIVIALTAFQFRFVERKVNY
>Mature_293_residues
MLKNAVFQSKFLPYWLVLPQLAVVLVFFYWPALQAVAQSFLLQDAFGLSTTFVWFENYQELLADPDYFSAILRTFVFSVL
IAVSSLSLALLLAVMADRPLRGSMFYRTLLIWPYAVAPPVVGVLWIFMLNPSLGVIAHGLRAIGVDWNPLLDGNQAATLI
ILAAAWKQISYNFLFFLAGLQAIPGSVIEAAAIDGARPMRRFWTIVFPLLSPTIFFLIVVNIVYAFFETFGIIDTMTRGG
PAKATETLVYKVYSDGLLGGNLGSSAAQSVILMGIVIALTAFQFRFVERKVNY

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=288, Percent_Identity=53.125, Blast_Score=287, Evalue=5e-79,
Organism=Escherichia coli, GI1787570, Length=260, Percent_Identity=29.2307692307692, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1790465, Length=263, Percent_Identity=28.5171102661597, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32519; Mature: 32519

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS00639 THIOL_PROTEASE_HIS ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNAVFQSKFLPYWLVLPQLAVVLVFFYWPALQAVAQSFLLQDAFGLSTTFVWFENYQE
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LLADPDYFSAILRTFVFSVLIAVSSLSLALLLAVMADRPLRGSMFYRTLLIWPYAVAPPV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VGVLWIFMLNPSLGVIAHGLRAIGVDWNPLLDGNQAATLIILAAAWKQISYNFLFFLAGL
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QAIPGSVIEAAAIDGARPMRRFWTIVFPLLSPTIFFLIVVNIVYAFFETFGIIDTMTRGG
HHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PAKATETLVYKVYSDGLLGGNLGSSAAQSVILMGIVIALTAFQFRFVERKVNY
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKNAVFQSKFLPYWLVLPQLAVVLVFFYWPALQAVAQSFLLQDAFGLSTTFVWFENYQE
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LLADPDYFSAILRTFVFSVLIAVSSLSLALLLAVMADRPLRGSMFYRTLLIWPYAVAPPV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VGVLWIFMLNPSLGVIAHGLRAIGVDWNPLLDGNQAATLIILAAAWKQISYNFLFFLAGL
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QAIPGSVIEAAAIDGARPMRRFWTIVFPLLSPTIFFLIVVNIVYAFFETFGIIDTMTRGG
HHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PAKATETLVYKVYSDGLLGGNLGSSAAQSVILMGIVIALTAFQFRFVERKVNY
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA