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The map label for this gene is ugpB [H]

Identifier: 86747772

GI number: 86747772

Start: 731907

End: 733232

Strand: Direct

Name: ugpB [H]

Synonym: RPB_0646

Alternate gene names: 86747772

Gene position: 731907-733232 (Clockwise)

Preceding gene: 86747771

Following gene: 86747773

Centisome position: 13.73

GC content: 63.95

Gene sequence:

>1326_bases
ATGACTTTTCGTTTGAAAGCTCTGACCGCTGCGATGGCGACGACGATCGCCGCCACGCTGCTGATCGCGCCGGCGCAGGC
GGCGACCGAGATCCAGTGGTGGCACGCCATGACCGGCGGCAACAACGATGTCGTGGTCAAGCTCGCCAACGACTTCAACG
CCGCGCAGAGCGACTACAAGGTCGTCCCGACCTACAAGGGCAGCTACGCCGACACCATGAACGCCGGCATCGCGGCGTTC
CGCGCCGGCAACGCCCCGCACATCATGCAGGTGTTCGAGGTCGGCACCGCCACCATGATGGCGGCGACCGGCGCGGTGAA
GCCGGTCTACAAGCTGATGCAGGAGACCGGCGAGACATTCGATCCCAACGCCTACCTGCCGGCGATCACCGGCTACTACT
CGACCTCCAAGGGCGAGATGCTGTCGTTCCCGTTCAACTCGTCCTCGACGGTGATGTGGGTCAATCTCGACGCGCTCAAG
AAGGCCGGGATCGCCGAAGTTCCGAAGACCTGGCCGCAGGTGTTCGAGGATGCCAAGAAGCTGAAGGCGGCCGGCTACGC
CACCTGCGGCTTCTCCACCGCCTGGGTCACTTGGGTCAATCTCGAGCAGCTCTCCGCCTGGCACAATGTACCGCTGGCCA
GCAAGGCCAACGGCCTCGACGGCTTCGACACCAAGCTGGAGTTCAACGGCCCGGTGCAGGTCAAGCATCTGGAGACGCTG
ATCGAGCTGCAGAAGGACAAGACCTACGATTATTCCGGCCGCACCAACACCGGCGAGGGCCGCTTCACCTCCGGCGAGTG
CCCGATCTTCCTGACCTCGTCGGGTTTCTTCGGCAACGTCAAGTCTCAGGCCAAGTTCGCCTGGACCAACGCGCCGATGC
CGTACTACCCGGACGTTGCCGGCGCGCCGCAGAATTCGATCATCGGCGGCGCCTCGCTGTGGGTGATGGGCGGCAAGAGC
GCCGACGAATACAAGGGCGTCGCCAAGTTCCTCGCCTTCCTGTCCGACACCGACCGTCAGGTCGCGGTGCACAAGGCGTC
GGGCTATCTGCCGATCACCAAGGCGGCCTACGAGAAGGCCAAGGCCGACGGCTTCTACAACGACCAGCCCTATCTCGAGA
CCCCGATCAAGGAACTGACCAACAAGCCGCCGACCGAGAATTCCCGCGGCCTGCGGCTCGGCAACATGGTTCAGCTCCGC
GACGTCTGGGCCGAGGAAATCGAGCAGGCGCTGGCCGGCAAGAAGACCGCCAAGGAAGCGTTGGATGCAGCCGTCACCCG
CGGCAACGTGATGCTGCGGCAGTTCGAAAAGACCGCGGTGAAGTAA

Upstream 100 bases:

>100_bases
TTCCCCCTACGCTCTGGCCGCTGTATACGGTCATGTGTCTGTCATCCTGCGCTGCTAACGCGCGCCACACGAAGATGACG
GCCAAACTGGGAGGCTCTCG

Downstream 100 bases:

>100_bases
GCACTCCGCAACCTGCACCACCGTCATGGGTGGGCTCTTCTCCCCTCCCCCCGCTCTTGCGGCGGGGAGGGGTCGGGGGT
GGGGGGTGCCCCAGGCACGA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MTFRLKALTAAMATTIAATLLIAPAQAATEIQWWHAMTGGNNDVVVKLANDFNAAQSDYKVVPTYKGSYADTMNAGIAAF
RAGNAPHIMQVFEVGTATMMAATGAVKPVYKLMQETGETFDPNAYLPAITGYYSTSKGEMLSFPFNSSSTVMWVNLDALK
KAGIAEVPKTWPQVFEDAKKLKAAGYATCGFSTAWVTWVNLEQLSAWHNVPLASKANGLDGFDTKLEFNGPVQVKHLETL
IELQKDKTYDYSGRTNTGEGRFTSGECPIFLTSSGFFGNVKSQAKFAWTNAPMPYYPDVAGAPQNSIIGGASLWVMGGKS
ADEYKGVAKFLAFLSDTDRQVAVHKASGYLPITKAAYEKAKADGFYNDQPYLETPIKELTNKPPTENSRGLRLGNMVQLR
DVWAEEIEQALAGKKTAKEALDAAVTRGNVMLRQFEKTAVK

Sequences:

>Translated_441_residues
MTFRLKALTAAMATTIAATLLIAPAQAATEIQWWHAMTGGNNDVVVKLANDFNAAQSDYKVVPTYKGSYADTMNAGIAAF
RAGNAPHIMQVFEVGTATMMAATGAVKPVYKLMQETGETFDPNAYLPAITGYYSTSKGEMLSFPFNSSSTVMWVNLDALK
KAGIAEVPKTWPQVFEDAKKLKAAGYATCGFSTAWVTWVNLEQLSAWHNVPLASKANGLDGFDTKLEFNGPVQVKHLETL
IELQKDKTYDYSGRTNTGEGRFTSGECPIFLTSSGFFGNVKSQAKFAWTNAPMPYYPDVAGAPQNSIIGGASLWVMGGKS
ADEYKGVAKFLAFLSDTDRQVAVHKASGYLPITKAAYEKAKADGFYNDQPYLETPIKELTNKPPTENSRGLRLGNMVQLR
DVWAEEIEQALAGKKTAKEALDAAVTRGNVMLRQFEKTAVK
>Mature_440_residues
TFRLKALTAAMATTIAATLLIAPAQAATEIQWWHAMTGGNNDVVVKLANDFNAAQSDYKVVPTYKGSYADTMNAGIAAFR
AGNAPHIMQVFEVGTATMMAATGAVKPVYKLMQETGETFDPNAYLPAITGYYSTSKGEMLSFPFNSSSTVMWVNLDALKK
AGIAEVPKTWPQVFEDAKKLKAAGYATCGFSTAWVTWVNLEQLSAWHNVPLASKANGLDGFDTKLEFNGPVQVKHLETLI
ELQKDKTYDYSGRTNTGEGRFTSGECPIFLTSSGFFGNVKSQAKFAWTNAPMPYYPDVAGAPQNSIIGGASLWVMGGKSA
DEYKGVAKFLAFLSDTDRQVAVHKASGYLPITKAAYEKAKADGFYNDQPYLETPIKELTNKPPTENSRGLRLGNMVQLRD
VWAEEIEQALAGKKTAKEALDAAVTRGNVMLRQFEKTAVK

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=417, Percent_Identity=50.599520383693, Blast_Score=417, Evalue=1e-117,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47944; Mature: 47813

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFRLKALTAAMATTIAATLLIAPAQAATEIQWWHAMTGGNNDVVVKLANDFNAAQSDYK
CCEEHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEECCCCCEEEEEECCCCCCCCCCCE
VVPTYKGSYADTMNAGIAAFRAGNAPHIMQVFEVGTATMMAATGAVKPVYKLMQETGETF
EECCCCCCCCHHHHCCHHEEECCCCCHHHHHHHHCHHHHHHHCCCHHHHHHHHHHCCCCC
DPNAYLPAITGYYSTSKGEMLSFPFNSSSTVMWVNLDALKKAGIAEVPKTWPQVFEDAKK
CCCCCCCEEECEEECCCCCEEEECCCCCCEEEEEEHHHHHHCCCHHCCHHHHHHHHHHHH
LKAAGYATCGFSTAWVTWVNLEQLSAWHNVPLASKANGLDGFDTKLEFNGPVQVKHLETL
HHHCCEEECCCCEEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEHHHHHHH
IELQKDKTYDYSGRTNTGEGRFTSGECPIFLTSSGFFGNVKSQAKFAWTNAPMPYYPDVA
HHHHHCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCC
GAPQNSIIGGASLWVMGGKSADEYKGVAKFLAFLSDTDRQVAVHKASGYLPITKAAYEKA
CCCCCCEECCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHH
KADGFYNDQPYLETPIKELTNKPPTENSRGLRLGNMVQLRDVWAEEIEQALAGKKTAKEA
HCCCCCCCCCCHHCHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCHHHHHH
LDAAVTRGNVMLRQFEKTAVK
HHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TFRLKALTAAMATTIAATLLIAPAQAATEIQWWHAMTGGNNDVVVKLANDFNAAQSDYK
CEEHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEECCCCCEEEEEECCCCCCCCCCCE
VVPTYKGSYADTMNAGIAAFRAGNAPHIMQVFEVGTATMMAATGAVKPVYKLMQETGETF
EECCCCCCCCHHHHCCHHEEECCCCCHHHHHHHHCHHHHHHHCCCHHHHHHHHHHCCCCC
DPNAYLPAITGYYSTSKGEMLSFPFNSSSTVMWVNLDALKKAGIAEVPKTWPQVFEDAKK
CCCCCCCEEECEEECCCCCEEEECCCCCCEEEEEEHHHHHHCCCHHCCHHHHHHHHHHHH
LKAAGYATCGFSTAWVTWVNLEQLSAWHNVPLASKANGLDGFDTKLEFNGPVQVKHLETL
HHHCCEEECCCCEEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEHHHHHHH
IELQKDKTYDYSGRTNTGEGRFTSGECPIFLTSSGFFGNVKSQAKFAWTNAPMPYYPDVA
HHHHHCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCC
GAPQNSIIGGASLWVMGGKSADEYKGVAKFLAFLSDTDRQVAVHKASGYLPITKAAYEKA
CCCCCCEECCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHH
KADGFYNDQPYLETPIKELTNKPPTENSRGLRLGNMVQLRDVWAEEIEQALAGKKTAKEA
HCCCCCCCCCCHHCHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCHHHHHH
LDAAVTRGNVMLRQFEKTAVK
HHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]