Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is mviN [H]
Identifier: 86747708
GI number: 86747708
Start: 655394
End: 656950
Strand: Direct
Name: mviN [H]
Synonym: RPB_0582
Alternate gene names: 86747708
Gene position: 655394-656950 (Clockwise)
Preceding gene: 86747706
Following gene: 86747709
Centisome position: 12.29
GC content: 73.28
Gene sequence:
>1557_bases ATGATCCGTCCGATTCTCACCGTCTCCGCCGGCACGCTGACGTCCCGCCTGCTCGGATTCGTGCGCGACGCGCTGGTCGC GGCGCTGCTCGGCGCCGGCGCGGTGGCGGACGCGTTTCTGCTGGCGTTCCAGCTCGTCAATGTGGCGCGGCGGCTGCTGA CCGAAGGCGCGCTGAATGCGGCGCTGGTGCCGGCGTGGCTGCGGGTCCGCGAGCACAACGGCCCGGTCGCCGCCGCCGCC TTCGCCGGCCGGCTGCTCGGCACCGTGGCGCTGGCGACGCTCGTGCTGGCGCTGCTGCTCGGCGTGTTCATGCCGCTGTT GATCGCGCTCTTGGCGCCGGGCTTTCTCGGCCATCCGACGCTCGCGATGGCGGTGCGCGATGCCCGGCTGATGCTGCCTT ATCTGGCCTTCGCCGGCCCGGTCGCGGTGATGATGGGGCTGTTCAACGCGAACGGCAAAGTCGGCCTCACCGCGTTCTCG CCGCTGCTGTTCAACATCTTGCTGATCACCGTCACCGGCGCGCTGTTGCTGTGGCACGCCGACGAGACCCGCGCCGCGCT GATCCTGTCCGCCACCGTCGGCATCGCCGGGCTGCTGCAACTCGGCATCCTCGTGTTCAACGGCCGCGGCGAGCGCCTGG CGACGCCGCTGCGGGTGTCGTTCGACACCGCGACGCGCGCCTTCTTCGCCAAGGCGATCCCCGGCATGATCGCCAATTCC GGGCCGCAATTGCTGATCGTGATCGGCGCGGTCGTGGCGTCGGGGATGCCTTCCGCGGTGTCGTGGCTGTATTTCGCCAA CCGGCTGATCGAGCTGCCGCTCGGCATCGTCGGCGTGGCGATGGGCGCGGTGCTGGTGCCGGAACTGGCGCGCGCGGTGC GCGGCGACGACCGTGCCGCCTTGTCGGACGCCGCCTCGCGCGGGCTGGAGCTCGCGCTCGGCGTGGCGTTGCCGGCGACG CTGGGGCTGATCGTGCTGAGCGGGCCGATCGTGCGGGTACTGTTCGAGCACGGCGCGTTCGGCGCCGCCGACACCGCCGC GACCGCGCAGGCGCTGGCTCTGCTGGCGCTCGGGCTGCCGGCGCAGGTGCTGGCGAAGAACTGGTCGGCGGCGTTCTTCG CCCGCGAGGACACGCGCACGCCGCTGCTCGCCACGCTGCTCGCTTTGGCCGTGGCGCTCGCCGCCGCGCTGCTGCTCGGG CGGCTATTCGGCGCCGCCGGCGTCGCCGTCGCGATCGCGCTCGGCGCCTGGAGCAACGCAGCCCTGCTGCTGGGACGCGG CCTGAGCCGCTTCGGCGTTACGGTCGATCCGGTGGCGCGGCGCCGCGTCGCGCTGATCGTGCTCGCGGCCGGCGTGATGG GCGGGCTGCTGGCGCTGAAGGCGGCCTTCGTGCTGCCGCTGGTCGCGCAGGCCTCGACGCTGGTGCAGGCGGCGGTGCTC GGCGTCCTGATCGCCGGCGCTCTGATCATCTACGCCGCGCTGCTGATGCTGTTCGGCGTGGTGCGCCCCGCAGCGGCGCT CGGGGCGCTGCGGCGGCCGCGCGGCTTGCGCGGCTAG
Upstream 100 bases:
>100_bases TCATGCGCGGGTTCGGCCAACAGGGCCACCCCTTTACCAATCAGCCACTCAACCGAGCTCGACCCGGCCGTTGCGCCGGC AATCCGGCTATAAGGCCCGG
Downstream 100 bases:
>100_bases CGCGCTTGTGCCACTTCACGGCGCCTTTCCCAGTACGCGCAGGAATACGACCAATGGCCATCACGCAGCGGGTTTTCTCC GGGGTCCAGCCGACCGGCAA
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MIRPILTVSAGTLTSRLLGFVRDALVAALLGAGAVADAFLLAFQLVNVARRLLTEGALNAALVPAWLRVREHNGPVAAAA FAGRLLGTVALATLVLALLLGVFMPLLIALLAPGFLGHPTLAMAVRDARLMLPYLAFAGPVAVMMGLFNANGKVGLTAFS PLLFNILLITVTGALLLWHADETRAALILSATVGIAGLLQLGILVFNGRGERLATPLRVSFDTATRAFFAKAIPGMIANS GPQLLIVIGAVVASGMPSAVSWLYFANRLIELPLGIVGVAMGAVLVPELARAVRGDDRAALSDAASRGLELALGVALPAT LGLIVLSGPIVRVLFEHGAFGAADTAATAQALALLALGLPAQVLAKNWSAAFFAREDTRTPLLATLLALAVALAAALLLG RLFGAAGVAVAIALGAWSNAALLLGRGLSRFGVTVDPVARRRVALIVLAAGVMGGLLALKAAFVLPLVAQASTLVQAAVL GVLIAGALIIYAALLMLFGVVRPAAALGALRRPRGLRG
Sequences:
>Translated_518_residues MIRPILTVSAGTLTSRLLGFVRDALVAALLGAGAVADAFLLAFQLVNVARRLLTEGALNAALVPAWLRVREHNGPVAAAA FAGRLLGTVALATLVLALLLGVFMPLLIALLAPGFLGHPTLAMAVRDARLMLPYLAFAGPVAVMMGLFNANGKVGLTAFS PLLFNILLITVTGALLLWHADETRAALILSATVGIAGLLQLGILVFNGRGERLATPLRVSFDTATRAFFAKAIPGMIANS GPQLLIVIGAVVASGMPSAVSWLYFANRLIELPLGIVGVAMGAVLVPELARAVRGDDRAALSDAASRGLELALGVALPAT LGLIVLSGPIVRVLFEHGAFGAADTAATAQALALLALGLPAQVLAKNWSAAFFAREDTRTPLLATLLALAVALAAALLLG RLFGAAGVAVAIALGAWSNAALLLGRGLSRFGVTVDPVARRRVALIVLAAGVMGGLLALKAAFVLPLVAQASTLVQAAVL GVLIAGALIIYAALLMLFGVVRPAAALGALRRPRGLRG >Mature_518_residues MIRPILTVSAGTLTSRLLGFVRDALVAALLGAGAVADAFLLAFQLVNVARRLLTEGALNAALVPAWLRVREHNGPVAAAA FAGRLLGTVALATLVLALLLGVFMPLLIALLAPGFLGHPTLAMAVRDARLMLPYLAFAGPVAVMMGLFNANGKVGLTAFS PLLFNILLITVTGALLLWHADETRAALILSATVGIAGLLQLGILVFNGRGERLATPLRVSFDTATRAFFAKAIPGMIANS GPQLLIVIGAVVASGMPSAVSWLYFANRLIELPLGIVGVAMGAVLVPELARAVRGDDRAALSDAASRGLELALGVALPAT LGLIVLSGPIVRVLFEHGAFGAADTAATAQALALLALGLPAQVLAKNWSAAFFAREDTRTPLLATLLALAVALAAALLLG RLFGAAGVAVAIALGAWSNAALLLGRGLSRFGVTVDPVARRRVALIVLAAGVMGGLLALKAAFVLPLVAQASTLVQAAVL GVLIAGALIIYAALLMLFGVVRPAAALGALRRPRGLRG
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=431, Percent_Identity=31.0904872389791, Blast_Score=182, Evalue=7e-47,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 52845; Mature: 52845
Theoretical pI: Translated: 12.13; Mature: 12.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRPILTVSAGTLTSRLLGFVRDALVAALLGAGAVADAFLLAFQLVNVARRLLTEGALNA CCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH ALVPAWLRVREHNGPVAAAAFAGRLLGTVALATLVLALLLGVFMPLLIALLAPGFLGHPT HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH LAMAVRDARLMLPYLAFAGPVAVMMGLFNANGKVGLTAFSPLLFNILLITVTGALLLWHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHEEEC DETRAALILSATVGIAGLLQLGILVFNGRGERLATPLRVSFDTATRAFFAKAIPGMIANS CCCHHHHHHHHHHHHHHHHHHHHEEECCCCCEECCCCEEEHHHHHHHHHHHHHCHHHCCC GPQLLIVIGAVVASGMPSAVSWLYFANRLIELPLGIVGVAMGAVLVPELARAVRGDDRAA CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LSDAASRGLELALGVALPATLGLIVLSGPIVRVLFEHGAFGAADTAATAQALALLALGLP HHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC AQVLAKNWSAAFFAREDTRTPLLATLLALAVALAAALLLGRLFGAAGVAVAIALGAWSNA HHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ALLLGRGLSRFGVTVDPVARRRVALIVLAAGVMGGLLALKAAFVLPLVAQASTLVQAAVL HHHHHCCHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVLIAGALIIYAALLMLFGVVRPAAALGALRRPRGLRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIRPILTVSAGTLTSRLLGFVRDALVAALLGAGAVADAFLLAFQLVNVARRLLTEGALNA CCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH ALVPAWLRVREHNGPVAAAAFAGRLLGTVALATLVLALLLGVFMPLLIALLAPGFLGHPT HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH LAMAVRDARLMLPYLAFAGPVAVMMGLFNANGKVGLTAFSPLLFNILLITVTGALLLWHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHEEEC DETRAALILSATVGIAGLLQLGILVFNGRGERLATPLRVSFDTATRAFFAKAIPGMIANS CCCHHHHHHHHHHHHHHHHHHHHEEECCCCCEECCCCEEEHHHHHHHHHHHHHCHHHCCC GPQLLIVIGAVVASGMPSAVSWLYFANRLIELPLGIVGVAMGAVLVPELARAVRGDDRAA CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LSDAASRGLELALGVALPATLGLIVLSGPIVRVLFEHGAFGAADTAATAQALALLALGLP HHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC AQVLAKNWSAAFFAREDTRTPLLATLLALAVALAAALLLGRLFGAAGVAVAIALGAWSNA HHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ALLLGRGLSRFGVTVDPVARRRVALIVLAAGVMGGLLALKAAFVLPLVAQASTLVQAAVL HHHHHCCHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVLIAGALIIYAALLMLFGVVRPAAALGALRRPRGLRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA