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The map label for this gene is 86747696

Identifier: 86747696

GI number: 86747696

Start: 642990

End: 644114

Strand: Direct

Name: 86747696

Synonym: RPB_0570

Alternate gene names: NA

Gene position: 642990-644114 (Clockwise)

Preceding gene: 86747692

Following gene: 86747697

Centisome position: 12.06

GC content: 63.47

Gene sequence:

>1125_bases
ATGACCCCCGCCTTCCTGTCGCGAGCGTTAATCGGGGCGGTCGCCGTGGCTCTGCTGGCCGTGCCGGTCCAGGCGTCGCC
GCCGCCGGCCCCGGCCAAGCCGGCCGAAAAGCCGGCGCCGCCACCGCCGCCGCCGAAAAAGCCGCCGCCGCCGGTCGTCC
AGCCGATCCGCAAAGTGCCGGAAGGCGGCTTCGACAAGCTGTCGTTCGGCACCAATTGGGTCGCCGAGGGCGAGCATGGC
GGCTTCTTCCAGGCGGTCGCCGACGGCACCTACAAGGCCTACGGCCTGGATGTGACGATCGTGCCGGGCGGGCCGAACGT
CAACAATCGCGCGCTGCTGCTCGCCGGCAAGCTCGACTTCTTCATGACCGCCAATACGCTGCAATCGTTCGACGCGGTCG
CCAACAACGTGCCGGTGGTGGCGATCGCCGCGGTGTTCCAGAAGGACCCGCAGGTGTTCCTGAGCCATCCGGAATCCAGG
GTCGAGAAGCTCGAGGATCTGAAGCGGCTGACGCTGTTCGTCTCCAAGGAGGGCATCGCCAGCTACTTCCAGTGGCTGAA
ATCCGAATACGGCTTCAGCGAAGCCAAGGTGAAGCCCTACACGTCGAATCCGCAGCCTTTCATCATCGACAAGAACTCGG
CGATGCAGGGCTACGTCACCTCGGAGCCGTTCGTGATCGAGCAGAAGGCGAAGTTCAAGCCGAACGTGCTGCTGCTGGCT
GATGACGGCCTCGACGGCTATTCGACGCTGATCGAGACCCGGCGCGACCTGATCGACAAGAATCCGGAGATGATCCAGCG
CTTCGTCGATGCCTCGATGATCGGCTGGTACAACTACCTCTACGGCGACAATTCGGCCGGCAACGCGCTGATCAAGTCGC
TCAATCCGGAGATGACCGACGAGATGCTGGCCTATTGCGTCGACAAGATGAAGCAGTACGGCATCGTCGATTCCGGCGAC
GCGGTGACCAACGGCATCGGCGCGATGAGCGACGCGCGCTACGCCAGCTTCTTCGATAAAATGTCGCGCGCCGGCGTGGT
CAAGCGCGATCTGGATTTTCGCCGGGCCTATACGCTGCAATTCACCAACAAGGGCGTCGGCGTCGATCTGCGGCCGAACA
AATAG

Upstream 100 bases:

>100_bases
TTCAAATGCCCGCATTGTTTCGCTATCTATCCTCGACCGGACGAAACCGCGCCGCCTCGCTGCTCCCATCATGGGCCAAA
ACGAACGACGGAGTCCAATC

Downstream 100 bases:

>100_bases
CGCCGGCGCGATGGCGGTGTCCTCCTCGCGCGATCTCGACAGCCCGGCGGCAGGTCCGGCGATCCGCCTGCGCGCGGTGA
CCAAGACCTATCGCAACGGC

Product: perplasmic binding protein of ABC transporter

Products: NA

Alternate protein names: NMT1/THI5 Like Domain Protein; NMT1/THI5 Like Domain-Containing Protein; NMT1/THI5 Like Family; Permease Protein Of ABC Transporter; Secreted Protein; Nitrate/Sulfonate/Bicarbonate ABC Transporter; Nitrate/Sulfonate/Bicarbonate ABC Transporter Permease; ABC Transporter Permease; PAS/PAC Sensor Hybrid Histidine Kinase; NMT1/THI5-Ike Domain-Containing Protein; Lipoprotein

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MTPAFLSRALIGAVAVALLAVPVQASPPPAPAKPAEKPAPPPPPPKKPPPPVVQPIRKVPEGGFDKLSFGTNWVAEGEHG
GFFQAVADGTYKAYGLDVTIVPGGPNVNNRALLLAGKLDFFMTANTLQSFDAVANNVPVVAIAAVFQKDPQVFLSHPESR
VEKLEDLKRLTLFVSKEGIASYFQWLKSEYGFSEAKVKPYTSNPQPFIIDKNSAMQGYVTSEPFVIEQKAKFKPNVLLLA
DDGLDGYSTLIETRRDLIDKNPEMIQRFVDASMIGWYNYLYGDNSAGNALIKSLNPEMTDEMLAYCVDKMKQYGIVDSGD
AVTNGIGAMSDARYASFFDKMSRAGVVKRDLDFRRAYTLQFTNKGVGVDLRPNK

Sequences:

>Translated_374_residues
MTPAFLSRALIGAVAVALLAVPVQASPPPAPAKPAEKPAPPPPPPKKPPPPVVQPIRKVPEGGFDKLSFGTNWVAEGEHG
GFFQAVADGTYKAYGLDVTIVPGGPNVNNRALLLAGKLDFFMTANTLQSFDAVANNVPVVAIAAVFQKDPQVFLSHPESR
VEKLEDLKRLTLFVSKEGIASYFQWLKSEYGFSEAKVKPYTSNPQPFIIDKNSAMQGYVTSEPFVIEQKAKFKPNVLLLA
DDGLDGYSTLIETRRDLIDKNPEMIQRFVDASMIGWYNYLYGDNSAGNALIKSLNPEMTDEMLAYCVDKMKQYGIVDSGD
AVTNGIGAMSDARYASFFDKMSRAGVVKRDLDFRRAYTLQFTNKGVGVDLRPNK
>Mature_373_residues
TPAFLSRALIGAVAVALLAVPVQASPPPAPAKPAEKPAPPPPPPKKPPPPVVQPIRKVPEGGFDKLSFGTNWVAEGEHGG
FFQAVADGTYKAYGLDVTIVPGGPNVNNRALLLAGKLDFFMTANTLQSFDAVANNVPVVAIAAVFQKDPQVFLSHPESRV
EKLEDLKRLTLFVSKEGIASYFQWLKSEYGFSEAKVKPYTSNPQPFIIDKNSAMQGYVTSEPFVIEQKAKFKPNVLLLAD
DGLDGYSTLIETRRDLIDKNPEMIQRFVDASMIGWYNYLYGDNSAGNALIKSLNPEMTDEMLAYCVDKMKQYGIVDSGDA
VTNGIGAMSDARYASFFDKMSRAGVVKRDLDFRRAYTLQFTNKGVGVDLRPNK

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40892; Mature: 40761

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAFLSRALIGAVAVALLAVPVQASPPPAPAKPAEKPAPPPPPPKKPPPPVVQPIRKVP
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
EGGFDKLSFGTNWVAEGEHGGFFQAVADGTYKAYGLDVTIVPGGPNVNNRALLLAGKLDF
CCCCCCCCCCCCEEECCCCCCEEEEHHCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCE
FMTANTLQSFDAVANNVPVVAIAAVFQKDPQVFLSHPESRVEKLEDLKRLTLFVSKEGIA
EEEHHHHHHHHHHHCCCCCEEHHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHH
SYFQWLKSEYGFSEAKVKPYTSNPQPFIIDKNSAMQGYVTSEPFVIEQKAKFKPNVLLLA
HHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCCCCCEECCCCEEEECCCCCCCCEEEEE
DDGLDGYSTLIETRRDLIDKNPEMIQRFVDASMIGWYNYLYGDNSAGNALIKSLNPEMTD
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHH
EMLAYCVDKMKQYGIVDSGDAVTNGIGAMSDARYASFFDKMSRAGVVKRDLDFRRAYTLQ
HHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCEEEEEE
FTNKGVGVDLRPNK
EECCCCEEEECCCC
>Mature Secondary Structure 
TPAFLSRALIGAVAVALLAVPVQASPPPAPAKPAEKPAPPPPPPKKPPPPVVQPIRKVP
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
EGGFDKLSFGTNWVAEGEHGGFFQAVADGTYKAYGLDVTIVPGGPNVNNRALLLAGKLDF
CCCCCCCCCCCCEEECCCCCCEEEEHHCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCE
FMTANTLQSFDAVANNVPVVAIAAVFQKDPQVFLSHPESRVEKLEDLKRLTLFVSKEGIA
EEEHHHHHHHHHHHCCCCCEEHHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHH
SYFQWLKSEYGFSEAKVKPYTSNPQPFIIDKNSAMQGYVTSEPFVIEQKAKFKPNVLLLA
HHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCCCCCEECCCCEEEECCCCCCCCEEEEE
DDGLDGYSTLIETRRDLIDKNPEMIQRFVDASMIGWYNYLYGDNSAGNALIKSLNPEMTD
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHH
EMLAYCVDKMKQYGIVDSGDAVTNGIGAMSDARYASFFDKMSRAGVVKRDLDFRRAYTLQ
HHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCEEEEEE
FTNKGVGVDLRPNK
EECCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA