Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86747673
Identifier: 86747673
GI number: 86747673
Start: 614643
End: 615533
Strand: Direct
Name: 86747673
Synonym: RPB_0547
Alternate gene names: NA
Gene position: 614643-615533 (Clockwise)
Preceding gene: 86747670
Following gene: 86747674
Centisome position: 11.53
GC content: 68.46
Gene sequence:
>891_bases GTGAACATTCCCGTCAGCTTCGCAACTCGTCGGACGGCCATCGCGGCGCTGCTGCGGTCCCGCTGGTCGGCAGGTGTTCT GGCTGCCGTGCTGGCGAGCGGGCTGGCGGCCGCGAGCCCGGCCGCGGCCCAGGGCAAGCTCGACGCCCGCTATGAAGCCA CGCTGGCGGGGATCGAGGTCGGCAAGGGCGCCTGGGTGATCGAGGTCACCGACGATGGCTACGCCGCCGCCGCCAATGGC GCGACGTCGGGCGTGATGCAGGCGTTTTCGCGCGGCCATGGCAGCGGCGAAGCGCAGGGGCGCATCGTCAACGGCCAGTT CGCGCCGATGAACTACATGGCGATCACCGCCAGCGCCAAGAAGATCGAGACCATCCGGATCACGCTGGCGAACGGCAACG TCAAGGAGTCCTCGATCGAGCCGGAGCAGCCGCCGGATGCCGATCGGATTCCGGTCACCGATGCGCACCGCCGCGGCGTG GTCGATCCGATGACCGGCTCGTTCCTCCGCGTGCCCGGCACCGGCGACCTGATGAGCCCGGAGTCGTGCCGGGTCTCGAC GCCGATCTTCGACGGCCGGATGCGCTACGATCTGCGGCTGGACTACAAGCGCACCGAAATGGTCAAGGCCGAGAAGGGCT ATCAGGGCCCGGTGCTGGTCTGCGGCGTCTACTTCACGCCCGTGTCCGGTTACATCCCCGATCGCGCTGCGATCAAATAT CTGACGGAGCAGCGCAACATGGAGGTCTGGCTGGCGCCGATCGCCGGGACGCGGGTGCTGGTGCCGTTCCGGATGAAGAT TCCGACCCCGCTCGGCAATGCCGTGCTGCAGGCGACCCAGTTCGTCACCACCGCGACCCCGCCGAAATCCGCCGCGTCGC GGACCCAATAG
Upstream 100 bases:
>100_bases ACCATATAAACGACGCATTCGGTTCCGAAACCTTGGTTCGGATCGGCGCGCGGATTTGAGTTCGGCTGAACCCCCGCGCC CGCAGGCAGGACCCCCCTTC
Downstream 100 bases:
>100_bases GCCTGCGGCGGTCGCGCGACCGTGCGAGTCGAATCCTGTTGACTCGCGGCGGAATCGCGGAACGCATGGCAACGGAGGCG AAGTCCGACGGCCGGTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MNIPVSFATRRTAIAALLRSRWSAGVLAAVLASGLAAASPAAAQGKLDARYEATLAGIEVGKGAWVIEVTDDGYAAAANG ATSGVMQAFSRGHGSGEAQGRIVNGQFAPMNYMAITASAKKIETIRITLANGNVKESSIEPEQPPDADRIPVTDAHRRGV VDPMTGSFLRVPGTGDLMSPESCRVSTPIFDGRMRYDLRLDYKRTEMVKAEKGYQGPVLVCGVYFTPVSGYIPDRAAIKY LTEQRNMEVWLAPIAGTRVLVPFRMKIPTPLGNAVLQATQFVTTATPPKSAASRTQ
Sequences:
>Translated_296_residues MNIPVSFATRRTAIAALLRSRWSAGVLAAVLASGLAAASPAAAQGKLDARYEATLAGIEVGKGAWVIEVTDDGYAAAANG ATSGVMQAFSRGHGSGEAQGRIVNGQFAPMNYMAITASAKKIETIRITLANGNVKESSIEPEQPPDADRIPVTDAHRRGV VDPMTGSFLRVPGTGDLMSPESCRVSTPIFDGRMRYDLRLDYKRTEMVKAEKGYQGPVLVCGVYFTPVSGYIPDRAAIKY LTEQRNMEVWLAPIAGTRVLVPFRMKIPTPLGNAVLQATQFVTTATPPKSAASRTQ >Mature_296_residues MNIPVSFATRRTAIAALLRSRWSAGVLAAVLASGLAAASPAAAQGKLDARYEATLAGIEVGKGAWVIEVTDDGYAAAANG ATSGVMQAFSRGHGSGEAQGRIVNGQFAPMNYMAITASAKKIETIRITLANGNVKESSIEPEQPPDADRIPVTDAHRRGV VDPMTGSFLRVPGTGDLMSPESCRVSTPIFDGRMRYDLRLDYKRTEMVKAEKGYQGPVLVCGVYFTPVSGYIPDRAAIKY LTEQRNMEVWLAPIAGTRVLVPFRMKIPTPLGNAVLQATQFVTTATPPKSAASRTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31545; Mature: 31545
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIPVSFATRRTAIAALLRSRWSAGVLAAVLASGLAAASPAAAQGKLDARYEATLAGIEV CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEE GKGAWVIEVTDDGYAAAANGATSGVMQAFSRGHGSGEAQGRIVNGQFAPMNYMAITASAK CCCEEEEEECCCCCEEECCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEEEECCC KIETIRITLANGNVKESSIEPEQPPDADRIPVTDAHRRGVVDPMTGSFLRVPGTGDLMSP EEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEECCCCCCCCCC ESCRVSTPIFDGRMRYDLRLDYKRTEMVKAEKGYQGPVLVCGVYFTPVSGYIPDRAAIKY CCCEEECCEECCEEEEEEEECCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHH LTEQRNMEVWLAPIAGTRVLVPFRMKIPTPLGNAVLQATQFVTTATPPKSAASRTQ HHHCCCCEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHEEECCCCCCCCCCCC >Mature Secondary Structure MNIPVSFATRRTAIAALLRSRWSAGVLAAVLASGLAAASPAAAQGKLDARYEATLAGIEV CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEE GKGAWVIEVTDDGYAAAANGATSGVMQAFSRGHGSGEAQGRIVNGQFAPMNYMAITASAK CCCEEEEEECCCCCEEECCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEEEECCC KIETIRITLANGNVKESSIEPEQPPDADRIPVTDAHRRGVVDPMTGSFLRVPGTGDLMSP EEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEECCCCCCCCCC ESCRVSTPIFDGRMRYDLRLDYKRTEMVKAEKGYQGPVLVCGVYFTPVSGYIPDRAAIKY CCCEEECCEECCEEEEEEEECCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHH LTEQRNMEVWLAPIAGTRVLVPFRMKIPTPLGNAVLQATQFVTTATPPKSAASRTQ HHHCCCCEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA