| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is aroK [H]
Identifier: 86747661
GI number: 86747661
Start: 600799
End: 601416
Strand: Direct
Name: aroK [H]
Synonym: RPB_0535
Alternate gene names: 86747661
Gene position: 600799-601416 (Clockwise)
Preceding gene: 86747656
Following gene: 86747662
Centisome position: 11.27
GC content: 70.06
Gene sequence:
>618_bases ATGTCTGACAGCGCACCGTCGGCCGCCGCCGCCAGGTCCCAGCAGGAAGCCGAGATCGTCGCGGCGCTGGGCGAGCGCCC GGTCGTGCTTATCGGCATGATGGGCGCCGGCAAGTCGACCGTCGGCCGCCGGCTGGCGCTGCGGCTCGGGCTGCCGTTTC TGGACGCCGACACCGAGATCGAACAGGCCGCGGCGATGACGATCCCGGAGATTTTCGAAACCCACGGCGAGCCGCATTTC CGCGACGGCGAGGCCCGGGTGATCGCCCGGCTGCTCGATGGCGGCGCCAAGATTCTCGCGACCGGCGGCGGCGCGTTCAT GCGCGAGGAGACCCGCGCGCGGATTCGCGACAAGGCGATCTCGATGTGGCTCGAGGCCGAGGCCGACGTCATCCTGCGCC GGGTCAAGCGCCGCGCCGACCGGCCGCTGCTGCAGACCGCGGATCCGGCCGGAACCATCGCCCGGCTGATCGGCGAGCGC TATCCGGTGTATCGTGGCGCCGACCTGACGATCGCATCGCGCGATGTGCCGCACGAGAAAATCGTCGACGAATGCGTTGC CGCGCTGCACGACTATCTCTGCAGCGCACCCGCCCCAACCCTGAGCGAGACACCATGA
Upstream 100 bases:
>100_bases CGCGTGGCAAGAGACTCTGGCAACCGCAGCAAGCGCAGTAGTATAGCTGGCCGTTCCGAGCCCAAGCGATCCCGCGCCCA AGCCCACGGGTGATACGACT
Downstream 100 bases:
>100_bases CTGCGCCGCTGAACCATTCCGCTCCGATCAAGGTCGAGGTCGCGCTCGGCGATCGCGCCTACGACATCGTGATCGGCCGC AACGTGCTCGGCACGCTCGG
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSDSAPSAAAARSQQEAEIVAALGERPVVLIGMMGAGKSTVGRRLALRLGLPFLDADTEIEQAAAMTIPEIFETHGEPHF RDGEARVIARLLDGGAKILATGGGAFMREETRARIRDKAISMWLEAEADVILRRVKRRADRPLLQTADPAGTIARLIGER YPVYRGADLTIASRDVPHEKIVDECVAALHDYLCSAPAPTLSETP
Sequences:
>Translated_205_residues MSDSAPSAAAARSQQEAEIVAALGERPVVLIGMMGAGKSTVGRRLALRLGLPFLDADTEIEQAAAMTIPEIFETHGEPHF RDGEARVIARLLDGGAKILATGGGAFMREETRARIRDKAISMWLEAEADVILRRVKRRADRPLLQTADPAGTIARLIGER YPVYRGADLTIASRDVPHEKIVDECVAALHDYLCSAPAPTLSETP >Mature_204_residues SDSAPSAAAARSQQEAEIVAALGERPVVLIGMMGAGKSTVGRRLALRLGLPFLDADTEIEQAAAMTIPEIFETHGEPHFR DGEARVIARLLDGGAKILATGGGAFMREETRARIRDKAISMWLEAEADVILRRVKRRADRPLLQTADPAGTIARLIGERY PVYRGADLTIASRDVPHEKIVDECVAALHDYLCSAPAPTLSETP
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=168, Percent_Identity=36.9047619047619, Blast_Score=110, Evalue=7e-26, Organism=Escherichia coli, GI1786587, Length=162, Percent_Identity=30.8641975308642, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 22094; Mature: 21962
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSAPSAAAARSQQEAEIVAALGERPVVLIGMMGAGKSTVGRRLALRLGLPFLDADTEI CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHH EQAAAMTIPEIFETHGEPHFRDGEARVIARLLDGGAKILATGGGAFMREETRARIRDKAI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHH SMWLEAEADVILRRVKRRADRPLLQTADPAGTIARLIGERYPVYRGADLTIASRDVPHEK HHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHH IVDECVAALHDYLCSAPAPTLSETP HHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SDSAPSAAAARSQQEAEIVAALGERPVVLIGMMGAGKSTVGRRLALRLGLPFLDADTEI CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHH EQAAAMTIPEIFETHGEPHFRDGEARVIARLLDGGAKILATGGGAFMREETRARIRDKAI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHH SMWLEAEADVILRRVKRRADRPLLQTADPAGTIARLIGERYPVYRGADLTIASRDVPHEK HHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHH IVDECVAALHDYLCSAPAPTLSETP HHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA