Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is ycfT [C]
Identifier: 86747630
GI number: 86747630
Start: 564104
End: 565159
Strand: Reverse
Name: ycfT [C]
Synonym: RPB_0504
Alternate gene names: 86747630
Gene position: 565159-564104 (Counterclockwise)
Preceding gene: 86747633
Following gene: 86747627
Centisome position: 10.6
GC content: 65.44
Gene sequence:
>1056_bases ATGACCGCAAACGGCACAGATGTCCCGGCCCGCATGCACGGCGACCGCGTCGACTGGGTGGACTACGCCAAGGGCATCTG CATCATCATGGTGGTGATGATGCATTCGGTGCTCGGCGTCGAGGCCGCGGCCGGCCAGACCAGTTTCATGCACTACGTGG TCGAGTTCGCCAAGCCGTTCCGGATGCCGGATTTCTTCCTGCTGTCCGGCCTGTTCCTGGCGGTGGTGATCGACCGCGAC TGGCGGACTTATCTCGACCGCAAGGTGGTGCACTTCGCTTACTTCTACATCCTGTGGGTGACGATCCAGTTTGCCTTCAA GGCGCCCTCCTTCGCGGCCGAGATGGGCTGGGCCGGCGTCGCCAAGCTGTACGCGCTGTCGTTCATCGATCCGTTCGGCA CGCTGTGGTTCATCTATCTGCTGCCGATCTTCTTCGTCGTCACCAAGCTGACGCGGCGCGTGCCGCCGCTGCTGATCCTC GGCATCTCGGCGCTGCTGGAGTGGCTGCATCTGCAGACCGGCTGGATGGTGCCCGACGAATTCTGCGCGCGGTTCTTCTA CTTTTTTGCCGGCTATCTGTTCGCCCGCTACGTCTTCGCGTTCTCCGACGCGGCGCGCGCCCGGCCGGCGCTGGCGCTGC TCGGGCTGGCGGCGTGGGCCGCCATCAATGCCGCGCTGGTCCATGCCGGATTCAGCGAGGCGCCGCTGCTCTCGCTCGTG CTCGGCCTCGCCGGCGCCGGCGCGATCATCGCCACCGGCACGCTGCTGGCGGAGAAGCGCTGGCTCGAGTCCTTGCGGTT CTGCGGCGAGCATTCGATCGTGATCTATCTCGCCTTCTTCCTGCCGATGGCGATCAGCCGGTCGCTGCTGCTGAAATTTG CGGGCTTTCTGGACCTCGGCGTGATCGCCATCCTGGTCAACATCGCCGGCGTGGTCGGCGCGTTGCTGATCTGGTGGCTG GCGATGAAGACCGGCGCCCGATTCCTGTTCGAACGCCCCGACGCCTTCTGGATCGCGCCGCGCAAGAAGGCGGTTCGGCT GCAGGCGGCGGAGTAG
Upstream 100 bases:
>100_bases GCCGGATTGCGCCGAGAGCGGCATATTCCTTGATCGTCGAAACACTAATGCAACCGATGTGCCCGATGATACACGCAAGC CGCATCAGACAGGAACAGCG
Downstream 100 bases:
>100_bases CTCGTCAACTTCGATACGGAGTAAGCGTCATCCTGAGGCGCCGTCGCGATAGCGACGGCCTCGAAGGATGGACCGCAAGC ACGACCCTCGTCGCACATCC
Product: acyltransferase 3
Products: NA
Alternate protein names: Acyltransferase Family Protein; Acyltransferase Putative
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MTANGTDVPARMHGDRVDWVDYAKGICIIMVVMMHSVLGVEAAAGQTSFMHYVVEFAKPFRMPDFFLLSGLFLAVVIDRD WRTYLDRKVVHFAYFYILWVTIQFAFKAPSFAAEMGWAGVAKLYALSFIDPFGTLWFIYLLPIFFVVTKLTRRVPPLLIL GISALLEWLHLQTGWMVPDEFCARFFYFFAGYLFARYVFAFSDAARARPALALLGLAAWAAINAALVHAGFSEAPLLSLV LGLAGAGAIIATGTLLAEKRWLESLRFCGEHSIVIYLAFFLPMAISRSLLLKFAGFLDLGVIAILVNIAGVVGALLIWWL AMKTGARFLFERPDAFWIAPRKKAVRLQAAE
Sequences:
>Translated_351_residues MTANGTDVPARMHGDRVDWVDYAKGICIIMVVMMHSVLGVEAAAGQTSFMHYVVEFAKPFRMPDFFLLSGLFLAVVIDRD WRTYLDRKVVHFAYFYILWVTIQFAFKAPSFAAEMGWAGVAKLYALSFIDPFGTLWFIYLLPIFFVVTKLTRRVPPLLIL GISALLEWLHLQTGWMVPDEFCARFFYFFAGYLFARYVFAFSDAARARPALALLGLAAWAAINAALVHAGFSEAPLLSLV LGLAGAGAIIATGTLLAEKRWLESLRFCGEHSIVIYLAFFLPMAISRSLLLKFAGFLDLGVIAILVNIAGVVGALLIWWL AMKTGARFLFERPDAFWIAPRKKAVRLQAAE >Mature_350_residues TANGTDVPARMHGDRVDWVDYAKGICIIMVVMMHSVLGVEAAAGQTSFMHYVVEFAKPFRMPDFFLLSGLFLAVVIDRDW RTYLDRKVVHFAYFYILWVTIQFAFKAPSFAAEMGWAGVAKLYALSFIDPFGTLWFIYLLPIFFVVTKLTRRVPPLLILG ISALLEWLHLQTGWMVPDEFCARFFYFFAGYLFARYVFAFSDAARARPALALLGLAAWAAINAALVHAGFSEAPLLSLVL GLAGAGAIIATGTLLAEKRWLESLRFCGEHSIVIYLAFFLPMAISRSLLLKFAGFLDLGVIAILVNIAGVVGALLIWWLA MKTGARFLFERPDAFWIAPRKKAVRLQAAE
Specific function: Unknown
COG id: COG4763
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787359, Length=159, Percent_Identity=28.9308176100629, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39233; Mature: 39102
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANGTDVPARMHGDRVDWVDYAKGICIIMVVMMHSVLGVEAAAGQTSFMHYVVEFAKPF CCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHC RMPDFFLLSGLFLAVVIDRDWRTYLDRKVVHFAYFYILWVTIQFAFKAPSFAAEMGWAGV CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHH AKLYALSFIDPFGTLWFIYLLPIFFVVTKLTRRVPPLLILGISALLEWLHLQTGWMVPDE HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHH FCARFFYFFAGYLFARYVFAFSDAARARPALALLGLAAWAAINAALVHAGFSEAPLLSLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LGLAGAGAIIATGTLLAEKRWLESLRFCGEHSIVIYLAFFLPMAISRSLLLKFAGFLDLG HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIAILVNIAGVVGALLIWWLAMKTGARFLFERPDAFWIAPRKKAVRLQAAE HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCHHEEEECCC >Mature Secondary Structure TANGTDVPARMHGDRVDWVDYAKGICIIMVVMMHSVLGVEAAAGQTSFMHYVVEFAKPF CCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHC RMPDFFLLSGLFLAVVIDRDWRTYLDRKVVHFAYFYILWVTIQFAFKAPSFAAEMGWAGV CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHH AKLYALSFIDPFGTLWFIYLLPIFFVVTKLTRRVPPLLILGISALLEWLHLQTGWMVPDE HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHH FCARFFYFFAGYLFARYVFAFSDAARARPALALLGLAAWAAINAALVHAGFSEAPLLSLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LGLAGAGAIIATGTLLAEKRWLESLRFCGEHSIVIYLAFFLPMAISRSLLLKFAGFLDLG HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIAILVNIAGVVGALLIWWLAMKTGARFLFERPDAFWIAPRKKAVRLQAAE HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA