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The map label for this gene is pdtaS [H]

Identifier: 86747624

GI number: 86747624

Start: 555756

End: 557018

Strand: Reverse

Name: pdtaS [H]

Synonym: RPB_0498

Alternate gene names: 86747624

Gene position: 557018-555756 (Counterclockwise)

Preceding gene: 86747625

Following gene: 86747623

Centisome position: 10.45

GC content: 64.05

Gene sequence:

>1263_bases
TTGAGGCTCTCGTGTGGCCAGCTTCTCTGCGAAGTGACACGACCTAGAATTGGCAGCTTCATGCCCTCCGAAACGAGGCT
GGTCTCGCCGAGCGCCTCAGATGCTTCTCTCAATCGCCAGGACGAGCTGCCGTACCGTCGCCGCCAGCAGGCGCTGCTTC
GGGAATTCGGGACGGCCGCCCTGCAGTCACGCGACTTCCGGCACATCCTGCAGCAGGCAGCCGGCCTCAGCGCCCGCGGC
CTGGGTTGCTCCTACGCCAAGGTCCTCGAATACGAGCCCGGCGAAAAGCGCCTGATCGTGCGCGCCGGAATCGGCTGGCC
CGCCGGCACGGTGGACCATGTGTCGCTCGGCGCCGACATCGAATCGCCCGCCGGCTACGCCTTTCAGACCGGGCAATCGG
TGATCTCCAATCACCTGCAGAAGGAGACGCGTTTCCGGACGCCGAAACTGCTGGCCGACCACGGCATCAAACGTGCGATC
AATGTGCTGATCCGGCGGGGCGGCGAGGGCGATACGGCGTTCGGCATTCTCGAAGCGGATAGTCCGGATCCGGGGCAGTT
CGACGACGCCGACGCGGATTTTCTGGCCGGCTTCGCAGGCCTGCTCGGTATCGCGATCGAACGCCAGCAAGCCGACGCCA
AGCTTCAGGACGCGCTCGAACACGAGGCCCTGCTGACGCGCGAGATGAGTCATCGCGTCAAGAACAGCCTCACCTCGGTG
GTCGGCCTGCTGCGGGTCCAGGCGCGCGGTTCGGAGTCCGCCGACGTGAAGAACGCATTGGAAAATGCGGCGATGCGCGT
CGCCTCGATCGCGGAGGTGCACGATCATCTATGGCGGGGCAGCAAGGTCGGCTTCGTCGACCTGTCCGACTTCGTCGGCC
ATCTGTGCAAGAACCTGCAGAGCTCGGCGCCGGAACATACGCTTCAATCGCGTTCCGACCCCGTCATCCTGTCCGCCGAC
AAGGCGATCCCGCTGGGGCTGCTGGTCAACGAACTCGTCACCAACGCCATAAAATACGCCTATGTCGATGGACCCGGTGT
GATCAGGATGGACGCGCGGGAGATCAACGGGCATCTGCTCGTCGAGATTTCCGACGAAGGCACCGGCCTGCCCGATGGTT
TCGACATCAACCAGCCGCGAAAGAGCCTCGGCTTTCGCGTCATCCTCGGCCTGGTCCGACAGTTGATGGGCGAGCTCGAG
ATCTCGAAGAACATCCCGCGGGGGGCCCTGTTCACCATCAAATTTCCGCTCGACCCGCCATGA

Upstream 100 bases:

>100_bases
CCAGCGGCCGTTTCGACCCGCCGATCGGTCGCATCTGGAACCAAAACACCCCGAGAACATTGTCAAATATCGTCATTCGG
GCGGTTGGTGCGGGTTCTCG

Downstream 100 bases:

>100_bases
ACGACCGTTCGATGCGCGAGCTGCAGTCGACATCCCGGACGCCGGATCATGCGAACCCTGTGAGTCCCTGTTAGATGGCT
TCAATCCACCCACCCATCCG

Product: signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MRLSCGQLLCEVTRPRIGSFMPSETRLVSPSASDASLNRQDELPYRRRQQALLREFGTAALQSRDFRHILQQAAGLSARG
LGCSYAKVLEYEPGEKRLIVRAGIGWPAGTVDHVSLGADIESPAGYAFQTGQSVISNHLQKETRFRTPKLLADHGIKRAI
NVLIRRGGEGDTAFGILEADSPDPGQFDDADADFLAGFAGLLGIAIERQQADAKLQDALEHEALLTREMSHRVKNSLTSV
VGLLRVQARGSESADVKNALENAAMRVASIAEVHDHLWRGSKVGFVDLSDFVGHLCKNLQSSAPEHTLQSRSDPVILSAD
KAIPLGLLVNELVTNAIKYAYVDGPGVIRMDAREINGHLLVEISDEGTGLPDGFDINQPRKSLGFRVILGLVRQLMGELE
ISKNIPRGALFTIKFPLDPP

Sequences:

>Translated_420_residues
MRLSCGQLLCEVTRPRIGSFMPSETRLVSPSASDASLNRQDELPYRRRQQALLREFGTAALQSRDFRHILQQAAGLSARG
LGCSYAKVLEYEPGEKRLIVRAGIGWPAGTVDHVSLGADIESPAGYAFQTGQSVISNHLQKETRFRTPKLLADHGIKRAI
NVLIRRGGEGDTAFGILEADSPDPGQFDDADADFLAGFAGLLGIAIERQQADAKLQDALEHEALLTREMSHRVKNSLTSV
VGLLRVQARGSESADVKNALENAAMRVASIAEVHDHLWRGSKVGFVDLSDFVGHLCKNLQSSAPEHTLQSRSDPVILSAD
KAIPLGLLVNELVTNAIKYAYVDGPGVIRMDAREINGHLLVEISDEGTGLPDGFDINQPRKSLGFRVILGLVRQLMGELE
ISKNIPRGALFTIKFPLDPP
>Mature_420_residues
MRLSCGQLLCEVTRPRIGSFMPSETRLVSPSASDASLNRQDELPYRRRQQALLREFGTAALQSRDFRHILQQAAGLSARG
LGCSYAKVLEYEPGEKRLIVRAGIGWPAGTVDHVSLGADIESPAGYAFQTGQSVISNHLQKETRFRTPKLLADHGIKRAI
NVLIRRGGEGDTAFGILEADSPDPGQFDDADADFLAGFAGLLGIAIERQQADAKLQDALEHEALLTREMSHRVKNSLTSV
VGLLRVQARGSESADVKNALENAAMRVASIAEVHDHLWRGSKVGFVDLSDFVGHLCKNLQSSAPEHTLQSRSDPVILSAD
KAIPLGLLVNELVTNAIKYAYVDGPGVIRMDAREINGHLLVEISDEGTGLPDGFDINQPRKSLGFRVILGLVRQLMGELE
ISKNIPRGALFTIKFPLDPP

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 45706; Mature: 45706

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSCGQLLCEVTRPRIGSFMPSETRLVSPSASDASLNRQDELPYRRRQQALLREFGTAA
CCCCHHHHHHHHHCCHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LQSRDFRHILQQAAGLSARGLGCSYAKVLEYEPGEKRLIVRAGIGWPAGTVDHVSLGADI
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEECCCC
ESPAGYAFQTGQSVISNHLQKETRFRTPKLLADHGIKRAINVLIRRGGEGDTAFGILEAD
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
SPDPGQFDDADADFLAGFAGLLGIAIERQQADAKLQDALEHEALLTREMSHRVKNSLTSV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLLRVQARGSESADVKNALENAAMRVASIAEVHDHLWRGSKVGFVDLSDFVGHLCKNLQ
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHH
SSAPEHTLQSRSDPVILSADKAIPLGLLVNELVTNAIKYAYVDGPGVIRMDAREINGHLL
HCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHEEEECCCCEEEEEHEECCCEEE
VEISDEGTGLPDGFDINQPRKSLGFRVILGLVRQLMGELEISKNIPRGALFTIKFPLDPP
EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MRLSCGQLLCEVTRPRIGSFMPSETRLVSPSASDASLNRQDELPYRRRQQALLREFGTAA
CCCCHHHHHHHHHCCHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LQSRDFRHILQQAAGLSARGLGCSYAKVLEYEPGEKRLIVRAGIGWPAGTVDHVSLGADI
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEECCCC
ESPAGYAFQTGQSVISNHLQKETRFRTPKLLADHGIKRAINVLIRRGGEGDTAFGILEAD
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
SPDPGQFDDADADFLAGFAGLLGIAIERQQADAKLQDALEHEALLTREMSHRVKNSLTSV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLLRVQARGSESADVKNALENAAMRVASIAEVHDHLWRGSKVGFVDLSDFVGHLCKNLQ
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHH
SSAPEHTLQSRSDPVILSADKAIPLGLLVNELVTNAIKYAYVDGPGVIRMDAREINGHLL
HCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHEEEECCCCEEEEEHEECCCEEE
VEISDEGTGLPDGFDINQPRKSLGFRVILGLVRQLMGELEISKNIPRGALFTIKFPLDPP
EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]