Click here to switch to the map view.

The map label for this gene is 86747622

Identifier: 86747622

GI number: 86747622

Start: 554482

End: 555213

Strand: Reverse

Name: 86747622

Synonym: RPB_0496

Alternate gene names: NA

Gene position: 555213-554482 (Counterclockwise)

Preceding gene: 86747623

Following gene: 86747620

Centisome position: 10.41

GC content: 64.75

Gene sequence:

>732_bases
ATGACAACCGCAAAACTCCTGGTCGTGGCCGCAGTGATCGGCACCGTCGGCACGACCCAGGCGCTGGCCGCGTGCGAGAT
CGCCGACGCCAAGCTCGAAGAGGCGATTCAGGAAAATCCCCGATTTCGCGGGCCGGCGAACAGTCAGGCCGTGCGCGACC
TCCGGAGCCTGCGCGATGCCGCCTTCACGTTGCGATCCTATGGGCGCCACGACGACTGCGAGCGTCTGCTCGCCAACATT
CGCGAACTGATCGCCGGGCCGCCGATGGGGTCGCTCGGCGACAATGACGAGGAGCAGGCGGATATCCAGAATTCCGCCCG
CGAACCGAAATCCCGGCGCGGGACGCCGGCGGGCAGCCGCGACGACAAGGATGCCAAGCCGCTGATCAGGATCGACCAGC
TGACGCCCGGTCTGCGGACCGACGAGATGATCGGGGCGGAAGTCCGCAGTTCCGACGACAAGATCGTCGGCGAGGTCCGC
AACATCGTGTTCGGCACCAAGGACGGGCGCGACTACGCGATCATCGCGTCGGGCGGATTCTTCACCACCGGCAAGGACAG
CATCGTGGTGCCGATCCGGTCACTCAAAGTCACGCAGGATCGATCGAGCTTCTTTCTCCCGATCGTGAAGGACGTGATGG
AGACGGTGCCGGTGATGCCCGATCAGGACTACAACTGGCTCTCGGACCCAAAATGGCGCGCCCGCAACGACGCGTTCTTC
GAGAAGCCCTGA

Upstream 100 bases:

>100_bases
TGCGGCGTGACGGCCCGGCCGAACTCGCTGAATGTCATTACTCGCACAGGCCTTCACGTCTCGCGCTCGAACGCGCAAGC
CAGATACAGGACACTTCGCA

Downstream 100 bases:

>100_bases
GCGCGATAGCGTTTTCGAGCGAAGTGGATACCGGTTCGCGTAAAGAAAACGCGTCAAATCAAGAATCGAGAGCTCCGGTT
CTGATCCTGTCAGAACCGGA

Product: photosynthetic reaction center protein

Products: NA

Alternate protein names: PRC-Barrel Domain-Containing Protein; PRC-Barrel Protein; Photosynthetic Reaction Center Protein

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MTTAKLLVVAAVIGTVGTTQALAACEIADAKLEEAIQENPRFRGPANSQAVRDLRSLRDAAFTLRSYGRHDDCERLLANI
RELIAGPPMGSLGDNDEEQADIQNSAREPKSRRGTPAGSRDDKDAKPLIRIDQLTPGLRTDEMIGAEVRSSDDKIVGEVR
NIVFGTKDGRDYAIIASGGFFTTGKDSIVVPIRSLKVTQDRSSFFLPIVKDVMETVPVMPDQDYNWLSDPKWRARNDAFF
EKP

Sequences:

>Translated_243_residues
MTTAKLLVVAAVIGTVGTTQALAACEIADAKLEEAIQENPRFRGPANSQAVRDLRSLRDAAFTLRSYGRHDDCERLLANI
RELIAGPPMGSLGDNDEEQADIQNSAREPKSRRGTPAGSRDDKDAKPLIRIDQLTPGLRTDEMIGAEVRSSDDKIVGEVR
NIVFGTKDGRDYAIIASGGFFTTGKDSIVVPIRSLKVTQDRSSFFLPIVKDVMETVPVMPDQDYNWLSDPKWRARNDAFF
EKP
>Mature_242_residues
TTAKLLVVAAVIGTVGTTQALAACEIADAKLEEAIQENPRFRGPANSQAVRDLRSLRDAAFTLRSYGRHDDCERLLANIR
ELIAGPPMGSLGDNDEEQADIQNSAREPKSRRGTPAGSRDDKDAKPLIRIDQLTPGLRTDEMIGAEVRSSDDKIVGEVRN
IVFGTKDGRDYAIIASGGFFTTGKDSIVVPIRSLKVTQDRSSFFLPIVKDVMETVPVMPDQDYNWLSDPKWRARNDAFFE
KP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26763; Mature: 26632

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAKLLVVAAVIGTVGTTQALAACEIADAKLEEAIQENPRFRGPANSQAVRDLRSLRDA
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
AFTLRSYGRHDDCERLLANIRELIAGPPMGSLGDNDEEQADIQNSAREPKSRRGTPAGSR
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCC
DDKDAKPLIRIDQLTPGLRTDEMIGAEVRSSDDKIVGEVRNIVFGTKDGRDYAIIASGGF
CCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCCE
FTTGKDSIVVPIRSLKVTQDRSSFFLPIVKDVMETVPVMPDQDYNWLSDPKWRARNDAFF
EECCCCCEEEEHHHEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
EKP
CCC
>Mature Secondary Structure 
TTAKLLVVAAVIGTVGTTQALAACEIADAKLEEAIQENPRFRGPANSQAVRDLRSLRDA
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
AFTLRSYGRHDDCERLLANIRELIAGPPMGSLGDNDEEQADIQNSAREPKSRRGTPAGSR
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCC
DDKDAKPLIRIDQLTPGLRTDEMIGAEVRSSDDKIVGEVRNIVFGTKDGRDYAIIASGGF
CCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCCE
FTTGKDSIVVPIRSLKVTQDRSSFFLPIVKDVMETVPVMPDQDYNWLSDPKWRARNDAFF
EECCCCCEEEEHHHEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
EKP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA