| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747586
Identifier: 86747586
GI number: 86747586
Start: 507029
End: 507904
Strand: Direct
Name: 86747586
Synonym: RPB_0460
Alternate gene names: NA
Gene position: 507029-507904 (Clockwise)
Preceding gene: 86747585
Following gene: 86747589
Centisome position: 9.51
GC content: 63.93
Gene sequence:
>876_bases ATGCGCAACACCATGCTGACTTCGTTCGTTTCCGCTCTGCTCGCTGTGGCGGCGTCGGTCACCGTCGCGGCTGCGGCCGA CGGCGCCATCGACAACGGCGCGCTGGCGAAATCCGAATTCCGCGACCATGCGCGGACCTTCGGACTGGTCTACACGCTGC CCAAGACCGTCAACGACGTTCTCGATGCGACCATCAGGGGCCCGCTGAAGGAAAAGCTCCTGAATGCGAAGCTCGACACC GAAGCGCAGATGCACAACATTCCGCACGTCACGGTGGTGCACATCCACAATGCCGATCCGGCCACGCCCGAGAAGATGCT CGCGGCGCTGCCCAAGCTGCCGCCGGTCCTCGACGTCACGCTGAAGACTTTCTACACCACCGAAGCCGCCAAGGGCGCCG GCCATCCGTGGTGGCTCGACCTCGGCATCGTCAAGGAAGGCAAGAGCTTCGAGGAGATGATGGCGTTCAATACCGCCGCC ACGGCGGCGCTGGCGCCGCTCCGCGACGGACCGCTGCCGCGTTGCACCGGTCCGGTCTATGCGGTGATGAGCGATGCCGC CAAGGATCTGGTCCGCACCGTCGGCGTCAGCGGCGTCAATGTCGTCAAGGACGGCAAGGAATTGCGCTCGCACAACCCGC ACAACACGCTGGTCTACAGCATGGCGAAATTCACCCCTGAGCTGCAGGCGCAGATGAACCAGGCGGCGAAGGAGTTCAAC CAGATCCTCCCGGACGGAATCCCCACCTCCTTCAAGAGCGTCTCGATCGTCGAGCTGGGCTTCGCCGGCAACGTGCTGCG CGAAATCTATCGGATCAGCCTCGAGGACGGCTCGGTGCTGAACGTCGCGACCGGCAAGATGGCTTCGCTGAAGTAG
Upstream 100 bases:
>100_bases GATCGGCCGCCGCAAGTCGATCAGGCGCAGTCGATCAGGCGCAGCAGTGCGTCTGCACGTCTCCGCATGCTCCGAAATCC AGCGAAAGGCTCCCTCCTTC
Downstream 100 bases:
>100_bases CCATCCGACCGGGCGCTCCGGCGCTCGGTGCGCCAGCCCGCCAAGGAAAAGGGCGGCCCGATGATGGGCCGCCCTTTTTG ATTCGCGATGTCGCTTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MRNTMLTSFVSALLAVAASVTVAAAADGAIDNGALAKSEFRDHARTFGLVYTLPKTVNDVLDATIRGPLKEKLLNAKLDT EAQMHNIPHVTVVHIHNADPATPEKMLAALPKLPPVLDVTLKTFYTTEAAKGAGHPWWLDLGIVKEGKSFEEMMAFNTAA TAALAPLRDGPLPRCTGPVYAVMSDAAKDLVRTVGVSGVNVVKDGKELRSHNPHNTLVYSMAKFTPELQAQMNQAAKEFN QILPDGIPTSFKSVSIVELGFAGNVLREIYRISLEDGSVLNVATGKMASLK
Sequences:
>Translated_291_residues MRNTMLTSFVSALLAVAASVTVAAAADGAIDNGALAKSEFRDHARTFGLVYTLPKTVNDVLDATIRGPLKEKLLNAKLDT EAQMHNIPHVTVVHIHNADPATPEKMLAALPKLPPVLDVTLKTFYTTEAAKGAGHPWWLDLGIVKEGKSFEEMMAFNTAA TAALAPLRDGPLPRCTGPVYAVMSDAAKDLVRTVGVSGVNVVKDGKELRSHNPHNTLVYSMAKFTPELQAQMNQAAKEFN QILPDGIPTSFKSVSIVELGFAGNVLREIYRISLEDGSVLNVATGKMASLK >Mature_291_residues MRNTMLTSFVSALLAVAASVTVAAAADGAIDNGALAKSEFRDHARTFGLVYTLPKTVNDVLDATIRGPLKEKLLNAKLDT EAQMHNIPHVTVVHIHNADPATPEKMLAALPKLPPVLDVTLKTFYTTEAAKGAGHPWWLDLGIVKEGKSFEEMMAFNTAA TAALAPLRDGPLPRCTGPVYAVMSDAAKDLVRTVGVSGVNVVKDGKELRSHNPHNTLVYSMAKFTPELQAQMNQAAKEFN QILPDGIPTSFKSVSIVELGFAGNVLREIYRISLEDGSVLNVATGKMASLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31185; Mature: 31185
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNTMLTSFVSALLAVAASVTVAAAADGAIDNGALAKSEFRDHARTFGLVYTLPKTVNDV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEECHHHHHHH LDATIRGPLKEKLLNAKLDTEAQMHNIPHVTVVHIHNADPATPEKMLAALPKLPPVLDVT HHHHHCCHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHH LKTFYTTEAAKGAGHPWWLDLGIVKEGKSFEEMMAFNTAATAALAPLRDGPLPRCTGPVY HHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH AVMSDAAKDLVRTVGVSGVNVVKDGKELRSHNPHNTLVYSMAKFTPELQAQMNQAAKEFN HHHHHHHHHHHHHHCCCCCHHHCCCHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH QILPDGIPTSFKSVSIVELGFAGNVLREIYRISLEDGSVLNVATGKMASLK HHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCHHCCC >Mature Secondary Structure MRNTMLTSFVSALLAVAASVTVAAAADGAIDNGALAKSEFRDHARTFGLVYTLPKTVNDV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEECHHHHHHH LDATIRGPLKEKLLNAKLDTEAQMHNIPHVTVVHIHNADPATPEKMLAALPKLPPVLDVT HHHHHCCHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHH LKTFYTTEAAKGAGHPWWLDLGIVKEGKSFEEMMAFNTAATAALAPLRDGPLPRCTGPVY HHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH AVMSDAAKDLVRTVGVSGVNVVKDGKELRSHNPHNTLVYSMAKFTPELQAQMNQAAKEFN HHHHHHHHHHHHHHCCCCCHHHCCCHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH QILPDGIPTSFKSVSIVELGFAGNVLREIYRISLEDGSVLNVATGKMASLK HHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA