| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747566
Identifier: 86747566
GI number: 86747566
Start: 482994
End: 484511
Strand: Reverse
Name: 86747566
Synonym: RPB_0440
Alternate gene names: NA
Gene position: 484511-482994 (Counterclockwise)
Preceding gene: 86747567
Following gene: 86747564
Centisome position: 9.09
GC content: 69.24
Gene sequence:
>1518_bases ATGTCGATGTCGCCCGGATTCGCCCGCCGCGTCGCGCTGGCGCTGATACTTCTCGCAACCACCGCAGCGCTCGCTCCGGC CCGTGCCCAGGACGCCTCGCCCCCGGCCACCGCGCAAAGCAAACCCGCGCCCGCCGACGCCGAGCAGCACAAGCTGCCCG CCGATTCGACGACCAGACACACGCTGGCGCTGCCCGGCCGCAGCCTGTCCTTCACCGCCACCGCCGGATCGATCCGGCTG TTCAACGACAAGGGCGAGCCGCAGGCCGATATCGCCACCACGGCCTATCAGCTCGACAATACCGAGGCGCGGACGCGGCC GGTGACCTTCGTGTTCAACGGCGGGCCGGGCGCTTCCTCGGCCTGGCTGCAGCTCGGCGCGGCGGGGCCGTGGCGGCTGC CGATGGCCGGCGACGCCGCAGTCGCTTCGGCGACGCCGGCGCTGCAGCCGAATGCCGAGACCTGGCTCGACGTCACCGAC CTCGTCTTCATCGATCCGGTCGGCACCGGCTACAGCCGTTTCGTCGCCAGCGGCGACGACGTGCGCAAGCAGTTCTATTC GGTCGACGGCGATGTCGCCGCGATCGCGCTGGTGATCCGGCGCTGGCTGGAGAAGCACGACCGGCTGCTGTCGCCCAAAT ACGTCGCCGGCGAAAGCTATGGCGGCATTCGCGGCCCGCGCGTGGTGCGCAATCTGCAGACCCGCCAAGGCATCGGCGTC AAGGGGCTGATCCTGGTGTCGCCCTTGCTCGACTTCCGCGAATACTCCGGATCGAGCCTGCTGCAATACGTCGCCAGGCT GCCGACCATGGCGGCGGCGGCGCGGCAGCGAAAGGGTCCGGTCACCCGCGCCGATCTCGCCGACGTCGAGAGCTACGCGC GCGGCGAATTCATCACCGATCTGCTCAAGGGGCAGGCCGACCAGGCCGCCACCCAGCGCCTCGCCGATCGCGTCGCGGCC TCGAGCGGGATCGATCCCGCCGTCAGCCGCAGGCTCGCCGGCCGGCTCGATACCAGCGAATTCCAGCGCGAGTTCGATCG GGCGAACGGCAAGGTCACCGGCCGGTTCGACGCCTCGGTGCTGGGCTTCGATCCGTTTCCGGATTCCAGCGACGCGCAGT TCAGCGACCCGTCGTCGGAATCGCTGATCGCGCCGCTCACCAGCGCCGCGATGGAGCTGACCCGCAACATGCTGCAATGG CGCCCGAGCGGCTCGTATCATCTGCTCAACGGCGCGGTGTCGCAGCAATGGGATTTCGGCCGCGGCCGCAGCCCGGTCGA ATCGGTTACGCAGCTGCGCGAAATTCTCGCGGTCGACCCGAAGCTGCAGGTGCTGGTGACGCACGGCCTGTTCGACCTCG CCACGCCGTATTTCGGCAGCGTCGTCGCCATCGATCAGTTGCCGCCATTCGCATCGAAGCGGATCAGGCTCGTCACCTGG CCCGGCGGCCACATGACCTACGCCCGCGACGACGCCCGCAAAGCGCTGCGCGGCGAGGTCGGGGCGATGATGAAATAA
Upstream 100 bases:
>100_bases CGCCAATCCGACGCAGTTCTGCGCTCAACTCTCCTCGGGACCCATCGATCGCCGTCGCCGCGGGGCTTGATGCGGCAGTG GTCGCGCTGAAGGAGATGGA
Downstream 100 bases:
>100_bases CAACTCCAAATTCTATCAGAGCTGTTACTTCGAGACGCTCGCCACTCGCACAGCGCCGTCATCCCGAGGTGCTCGTCAAT AGCACGGAGCCGTCATCCTG
Product: peptidase S10, serine carboxypeptidase
Products: NA
Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; S10 Family Peptidase; Carboxypeptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MSMSPGFARRVALALILLATTAALAPARAQDASPPATAQSKPAPADAEQHKLPADSTTRHTLALPGRSLSFTATAGSIRL FNDKGEPQADIATTAYQLDNTEARTRPVTFVFNGGPGASSAWLQLGAAGPWRLPMAGDAAVASATPALQPNAETWLDVTD LVFIDPVGTGYSRFVASGDDVRKQFYSVDGDVAAIALVIRRWLEKHDRLLSPKYVAGESYGGIRGPRVVRNLQTRQGIGV KGLILVSPLLDFREYSGSSLLQYVARLPTMAAAARQRKGPVTRADLADVESYARGEFITDLLKGQADQAATQRLADRVAA SSGIDPAVSRRLAGRLDTSEFQREFDRANGKVTGRFDASVLGFDPFPDSSDAQFSDPSSESLIAPLTSAAMELTRNMLQW RPSGSYHLLNGAVSQQWDFGRGRSPVESVTQLREILAVDPKLQVLVTHGLFDLATPYFGSVVAIDQLPPFASKRIRLVTW PGGHMTYARDDARKALRGEVGAMMK
Sequences:
>Translated_505_residues MSMSPGFARRVALALILLATTAALAPARAQDASPPATAQSKPAPADAEQHKLPADSTTRHTLALPGRSLSFTATAGSIRL FNDKGEPQADIATTAYQLDNTEARTRPVTFVFNGGPGASSAWLQLGAAGPWRLPMAGDAAVASATPALQPNAETWLDVTD LVFIDPVGTGYSRFVASGDDVRKQFYSVDGDVAAIALVIRRWLEKHDRLLSPKYVAGESYGGIRGPRVVRNLQTRQGIGV KGLILVSPLLDFREYSGSSLLQYVARLPTMAAAARQRKGPVTRADLADVESYARGEFITDLLKGQADQAATQRLADRVAA SSGIDPAVSRRLAGRLDTSEFQREFDRANGKVTGRFDASVLGFDPFPDSSDAQFSDPSSESLIAPLTSAAMELTRNMLQW RPSGSYHLLNGAVSQQWDFGRGRSPVESVTQLREILAVDPKLQVLVTHGLFDLATPYFGSVVAIDQLPPFASKRIRLVTW PGGHMTYARDDARKALRGEVGAMMK >Mature_504_residues SMSPGFARRVALALILLATTAALAPARAQDASPPATAQSKPAPADAEQHKLPADSTTRHTLALPGRSLSFTATAGSIRLF NDKGEPQADIATTAYQLDNTEARTRPVTFVFNGGPGASSAWLQLGAAGPWRLPMAGDAAVASATPALQPNAETWLDVTDL VFIDPVGTGYSRFVASGDDVRKQFYSVDGDVAAIALVIRRWLEKHDRLLSPKYVAGESYGGIRGPRVVRNLQTRQGIGVK GLILVSPLLDFREYSGSSLLQYVARLPTMAAAARQRKGPVTRADLADVESYARGEFITDLLKGQADQAATQRLADRVAAS SGIDPAVSRRLAGRLDTSEFQREFDRANGKVTGRFDASVLGFDPFPDSSDAQFSDPSSESLIAPLTSAAMELTRNMLQWR PSGSYHLLNGAVSQQWDFGRGRSPVESVTQLREILAVDPKLQVLVTHGLFDLATPYFGSVVAIDQLPPFASKRIRLVTWP GGHMTYARDDARKALRGEVGAMMK
Specific function: Unknown
COG id: COG2939
COG function: function code E; Carboxypeptidase C (cathepsin A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54291; Mature: 54160
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: PS00131 CARBOXYPEPT_SER_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMSPGFARRVALALILLATTAALAPARAQDASPPATAQSKPAPADAEQHKLPADSTTRH CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCE TLALPGRSLSFTATAGSIRLFNDKGEPQADIATTAYQLDNTEARTRPVTFVFNGGPGASS EEECCCCCEEEEEECCEEEEECCCCCCCHHHHHHEEECCCCCCCCCCEEEEECCCCCCCC AWLQLGAAGPWRLPMAGDAAVASATPALQPNAETWLDVTDLVFIDPVGTGYSRFVASGDD HHEEECCCCCCCCCCCCCCHHHCCCCCCCCCCHHHCCHHHEEEECCCCCCHHHHHCCCHH VRKQFYSVDGDVAAIALVIRRWLEKHDRLLSPKYVAGESYGGIRGPRVVRNLQTRQGIGV HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCC KGLILVSPLLDFREYSGSSLLQYVARLPTMAAAARQRKGPVTRADLADVESYARGEFITD CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LLKGQADQAATQRLADRVAASSGIDPAVSRRLAGRLDTSEFQREFDRANGKVTGRFDASV HHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCEE LGFDPFPDSSDAQFSDPSSESLIAPLTSAAMELTRNMLQWRPSGSYHLLNGAVSQQWDFG ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHCCCCCC RGRSPVESVTQLREILAVDPKLQVLVTHGLFDLATPYFGSVVAIDQLPPFASKRIRLVTW CCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCEEEECCCCCCCCCCEEEEEC PGGHMTYARDDARKALRGEVGAMMK CCCCEEECHHHHHHHHHHHHHHCCC >Mature Secondary Structure SMSPGFARRVALALILLATTAALAPARAQDASPPATAQSKPAPADAEQHKLPADSTTRH CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCE TLALPGRSLSFTATAGSIRLFNDKGEPQADIATTAYQLDNTEARTRPVTFVFNGGPGASS EEECCCCCEEEEEECCEEEEECCCCCCCHHHHHHEEECCCCCCCCCCEEEEECCCCCCCC AWLQLGAAGPWRLPMAGDAAVASATPALQPNAETWLDVTDLVFIDPVGTGYSRFVASGDD HHEEECCCCCCCCCCCCCCHHHCCCCCCCCCCHHHCCHHHEEEECCCCCCHHHHHCCCHH VRKQFYSVDGDVAAIALVIRRWLEKHDRLLSPKYVAGESYGGIRGPRVVRNLQTRQGIGV HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCC KGLILVSPLLDFREYSGSSLLQYVARLPTMAAAARQRKGPVTRADLADVESYARGEFITD CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LLKGQADQAATQRLADRVAASSGIDPAVSRRLAGRLDTSEFQREFDRANGKVTGRFDASV HHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCEE LGFDPFPDSSDAQFSDPSSESLIAPLTSAAMELTRNMLQWRPSGSYHLLNGAVSQQWDFG ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHCCCCCC RGRSPVESVTQLREILAVDPKLQVLVTHGLFDLATPYFGSVVAIDQLPPFASKRIRLVTW CCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCEEEECCCCCCCCCCEEEEEC PGGHMTYARDDARKALRGEVGAMMK CCCCEEECHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA