Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86747566

Identifier: 86747566

GI number: 86747566

Start: 482994

End: 484511

Strand: Reverse

Name: 86747566

Synonym: RPB_0440

Alternate gene names: NA

Gene position: 484511-482994 (Counterclockwise)

Preceding gene: 86747567

Following gene: 86747564

Centisome position: 9.09

GC content: 69.24

Gene sequence:

>1518_bases
ATGTCGATGTCGCCCGGATTCGCCCGCCGCGTCGCGCTGGCGCTGATACTTCTCGCAACCACCGCAGCGCTCGCTCCGGC
CCGTGCCCAGGACGCCTCGCCCCCGGCCACCGCGCAAAGCAAACCCGCGCCCGCCGACGCCGAGCAGCACAAGCTGCCCG
CCGATTCGACGACCAGACACACGCTGGCGCTGCCCGGCCGCAGCCTGTCCTTCACCGCCACCGCCGGATCGATCCGGCTG
TTCAACGACAAGGGCGAGCCGCAGGCCGATATCGCCACCACGGCCTATCAGCTCGACAATACCGAGGCGCGGACGCGGCC
GGTGACCTTCGTGTTCAACGGCGGGCCGGGCGCTTCCTCGGCCTGGCTGCAGCTCGGCGCGGCGGGGCCGTGGCGGCTGC
CGATGGCCGGCGACGCCGCAGTCGCTTCGGCGACGCCGGCGCTGCAGCCGAATGCCGAGACCTGGCTCGACGTCACCGAC
CTCGTCTTCATCGATCCGGTCGGCACCGGCTACAGCCGTTTCGTCGCCAGCGGCGACGACGTGCGCAAGCAGTTCTATTC
GGTCGACGGCGATGTCGCCGCGATCGCGCTGGTGATCCGGCGCTGGCTGGAGAAGCACGACCGGCTGCTGTCGCCCAAAT
ACGTCGCCGGCGAAAGCTATGGCGGCATTCGCGGCCCGCGCGTGGTGCGCAATCTGCAGACCCGCCAAGGCATCGGCGTC
AAGGGGCTGATCCTGGTGTCGCCCTTGCTCGACTTCCGCGAATACTCCGGATCGAGCCTGCTGCAATACGTCGCCAGGCT
GCCGACCATGGCGGCGGCGGCGCGGCAGCGAAAGGGTCCGGTCACCCGCGCCGATCTCGCCGACGTCGAGAGCTACGCGC
GCGGCGAATTCATCACCGATCTGCTCAAGGGGCAGGCCGACCAGGCCGCCACCCAGCGCCTCGCCGATCGCGTCGCGGCC
TCGAGCGGGATCGATCCCGCCGTCAGCCGCAGGCTCGCCGGCCGGCTCGATACCAGCGAATTCCAGCGCGAGTTCGATCG
GGCGAACGGCAAGGTCACCGGCCGGTTCGACGCCTCGGTGCTGGGCTTCGATCCGTTTCCGGATTCCAGCGACGCGCAGT
TCAGCGACCCGTCGTCGGAATCGCTGATCGCGCCGCTCACCAGCGCCGCGATGGAGCTGACCCGCAACATGCTGCAATGG
CGCCCGAGCGGCTCGTATCATCTGCTCAACGGCGCGGTGTCGCAGCAATGGGATTTCGGCCGCGGCCGCAGCCCGGTCGA
ATCGGTTACGCAGCTGCGCGAAATTCTCGCGGTCGACCCGAAGCTGCAGGTGCTGGTGACGCACGGCCTGTTCGACCTCG
CCACGCCGTATTTCGGCAGCGTCGTCGCCATCGATCAGTTGCCGCCATTCGCATCGAAGCGGATCAGGCTCGTCACCTGG
CCCGGCGGCCACATGACCTACGCCCGCGACGACGCCCGCAAAGCGCTGCGCGGCGAGGTCGGGGCGATGATGAAATAA

Upstream 100 bases:

>100_bases
CGCCAATCCGACGCAGTTCTGCGCTCAACTCTCCTCGGGACCCATCGATCGCCGTCGCCGCGGGGCTTGATGCGGCAGTG
GTCGCGCTGAAGGAGATGGA

Downstream 100 bases:

>100_bases
CAACTCCAAATTCTATCAGAGCTGTTACTTCGAGACGCTCGCCACTCGCACAGCGCCGTCATCCCGAGGTGCTCGTCAAT
AGCACGGAGCCGTCATCCTG

Product: peptidase S10, serine carboxypeptidase

Products: NA

Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; S10 Family Peptidase; Carboxypeptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MSMSPGFARRVALALILLATTAALAPARAQDASPPATAQSKPAPADAEQHKLPADSTTRHTLALPGRSLSFTATAGSIRL
FNDKGEPQADIATTAYQLDNTEARTRPVTFVFNGGPGASSAWLQLGAAGPWRLPMAGDAAVASATPALQPNAETWLDVTD
LVFIDPVGTGYSRFVASGDDVRKQFYSVDGDVAAIALVIRRWLEKHDRLLSPKYVAGESYGGIRGPRVVRNLQTRQGIGV
KGLILVSPLLDFREYSGSSLLQYVARLPTMAAAARQRKGPVTRADLADVESYARGEFITDLLKGQADQAATQRLADRVAA
SSGIDPAVSRRLAGRLDTSEFQREFDRANGKVTGRFDASVLGFDPFPDSSDAQFSDPSSESLIAPLTSAAMELTRNMLQW
RPSGSYHLLNGAVSQQWDFGRGRSPVESVTQLREILAVDPKLQVLVTHGLFDLATPYFGSVVAIDQLPPFASKRIRLVTW
PGGHMTYARDDARKALRGEVGAMMK

Sequences:

>Translated_505_residues
MSMSPGFARRVALALILLATTAALAPARAQDASPPATAQSKPAPADAEQHKLPADSTTRHTLALPGRSLSFTATAGSIRL
FNDKGEPQADIATTAYQLDNTEARTRPVTFVFNGGPGASSAWLQLGAAGPWRLPMAGDAAVASATPALQPNAETWLDVTD
LVFIDPVGTGYSRFVASGDDVRKQFYSVDGDVAAIALVIRRWLEKHDRLLSPKYVAGESYGGIRGPRVVRNLQTRQGIGV
KGLILVSPLLDFREYSGSSLLQYVARLPTMAAAARQRKGPVTRADLADVESYARGEFITDLLKGQADQAATQRLADRVAA
SSGIDPAVSRRLAGRLDTSEFQREFDRANGKVTGRFDASVLGFDPFPDSSDAQFSDPSSESLIAPLTSAAMELTRNMLQW
RPSGSYHLLNGAVSQQWDFGRGRSPVESVTQLREILAVDPKLQVLVTHGLFDLATPYFGSVVAIDQLPPFASKRIRLVTW
PGGHMTYARDDARKALRGEVGAMMK
>Mature_504_residues
SMSPGFARRVALALILLATTAALAPARAQDASPPATAQSKPAPADAEQHKLPADSTTRHTLALPGRSLSFTATAGSIRLF
NDKGEPQADIATTAYQLDNTEARTRPVTFVFNGGPGASSAWLQLGAAGPWRLPMAGDAAVASATPALQPNAETWLDVTDL
VFIDPVGTGYSRFVASGDDVRKQFYSVDGDVAAIALVIRRWLEKHDRLLSPKYVAGESYGGIRGPRVVRNLQTRQGIGVK
GLILVSPLLDFREYSGSSLLQYVARLPTMAAAARQRKGPVTRADLADVESYARGEFITDLLKGQADQAATQRLADRVAAS
SGIDPAVSRRLAGRLDTSEFQREFDRANGKVTGRFDASVLGFDPFPDSSDAQFSDPSSESLIAPLTSAAMELTRNMLQWR
PSGSYHLLNGAVSQQWDFGRGRSPVESVTQLREILAVDPKLQVLVTHGLFDLATPYFGSVVAIDQLPPFASKRIRLVTWP
GGHMTYARDDARKALRGEVGAMMK

Specific function: Unknown

COG id: COG2939

COG function: function code E; Carboxypeptidase C (cathepsin A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54291; Mature: 54160

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS00131 CARBOXYPEPT_SER_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMSPGFARRVALALILLATTAALAPARAQDASPPATAQSKPAPADAEQHKLPADSTTRH
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCE
TLALPGRSLSFTATAGSIRLFNDKGEPQADIATTAYQLDNTEARTRPVTFVFNGGPGASS
EEECCCCCEEEEEECCEEEEECCCCCCCHHHHHHEEECCCCCCCCCCEEEEECCCCCCCC
AWLQLGAAGPWRLPMAGDAAVASATPALQPNAETWLDVTDLVFIDPVGTGYSRFVASGDD
HHEEECCCCCCCCCCCCCCHHHCCCCCCCCCCHHHCCHHHEEEECCCCCCHHHHHCCCHH
VRKQFYSVDGDVAAIALVIRRWLEKHDRLLSPKYVAGESYGGIRGPRVVRNLQTRQGIGV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCC
KGLILVSPLLDFREYSGSSLLQYVARLPTMAAAARQRKGPVTRADLADVESYARGEFITD
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LLKGQADQAATQRLADRVAASSGIDPAVSRRLAGRLDTSEFQREFDRANGKVTGRFDASV
HHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCEE
LGFDPFPDSSDAQFSDPSSESLIAPLTSAAMELTRNMLQWRPSGSYHLLNGAVSQQWDFG
ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHCCCCCC
RGRSPVESVTQLREILAVDPKLQVLVTHGLFDLATPYFGSVVAIDQLPPFASKRIRLVTW
CCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCEEEECCCCCCCCCCEEEEEC
PGGHMTYARDDARKALRGEVGAMMK
CCCCEEECHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SMSPGFARRVALALILLATTAALAPARAQDASPPATAQSKPAPADAEQHKLPADSTTRH
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCE
TLALPGRSLSFTATAGSIRLFNDKGEPQADIATTAYQLDNTEARTRPVTFVFNGGPGASS
EEECCCCCEEEEEECCEEEEECCCCCCCHHHHHHEEECCCCCCCCCCEEEEECCCCCCCC
AWLQLGAAGPWRLPMAGDAAVASATPALQPNAETWLDVTDLVFIDPVGTGYSRFVASGDD
HHEEECCCCCCCCCCCCCCHHHCCCCCCCCCCHHHCCHHHEEEECCCCCCHHHHHCCCHH
VRKQFYSVDGDVAAIALVIRRWLEKHDRLLSPKYVAGESYGGIRGPRVVRNLQTRQGIGV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCC
KGLILVSPLLDFREYSGSSLLQYVARLPTMAAAARQRKGPVTRADLADVESYARGEFITD
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LLKGQADQAATQRLADRVAASSGIDPAVSRRLAGRLDTSEFQREFDRANGKVTGRFDASV
HHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCEE
LGFDPFPDSSDAQFSDPSSESLIAPLTSAAMELTRNMLQWRPSGSYHLLNGAVSQQWDFG
ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHCCCCCC
RGRSPVESVTQLREILAVDPKLQVLVTHGLFDLATPYFGSVVAIDQLPPFASKRIRLVTW
CCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCEEEECCCCCCCCCCEEEEEC
PGGHMTYARDDARKALRGEVGAMMK
CCCCEEECHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA