Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86747554

Identifier: 86747554

GI number: 86747554

Start: 470755

End: 471693

Strand: Reverse

Name: 86747554

Synonym: RPB_0428

Alternate gene names: NA

Gene position: 471693-470755 (Counterclockwise)

Preceding gene: 86747562

Following gene: 86747551

Centisome position: 8.85

GC content: 67.73

Gene sequence:

>939_bases
ATGAGACAGATAGCGCGCCTTCTTGCGATTGCCCTGGTGCTTGCCGCAACGCCTGCGGCGGCCGACACCGTCTATCCGCG
CGGCATTCGCGTCGGTGTCACGCCGATGCCGGGGATGACCGAGTCGAAATCCTTTCTCGGATTCGAGACGGCTGACAACG
GCGTCAAGGTGTTGCTCGCCGAATTGCCGGGTCCGGCGTTCGGCGAGGTCGAGGCGGCCTTCAAGGCGGTGCCCGAAGGC
GCGATGGGGAAGGTGAAACCCGAGAGCCTGGAGACCACCGCCGGCACCGCCTACTACACCGCCGAGGAAGGCGTCGTCGG
CGCCGACAAGGTCCGTCGCTACTCGCTGATCGTGTCGGGCAGCAAGGCGTTCTCCGGCTATGTGGCGGTGCAGGTCGCCG
ACAGCGCGGCCAAGACCTACTCGGACGAGGCAGTGAAGAAGATGCTGAGCTCCGTCTCGGTGCGACAGCAGGTGCCGGTC
GAGGAGCAGGTCGCGCAGATGCCCTTCGACATCCGCGAGCTGGGCGACTTCAAGACCGTGCGCACGCTGGCGCCGGGCGC
CGCGCTGCTGCTCGCGGACGGCAACGAGGACACCGGCATCGAAGGCGCGCCGTTCATGGTGCTCGGCCTGATCGGCTCGG
TGCCGGAGCAGACCGATGATCGTGCGCGCTTCGCCCAGCAGGCCGCCGCCACTATCCCGGGTCTGCGCGACGCCAGGATC
ACAACCTCCGAACCGATGCGGATCGACGGCTTGCCCGGCTTCGAGACCCGGATCGAAGCCGTCAGCGGCAAGGACAACAC
CCCCGTCACGGTCGTGCAGTGGCTGCGGTTCGGCAATGCCAGCGTGGCGATGCGGGTGATCGGCAGCTCGCCGCGCGACC
TCTGGTCCGACGCGTTTCCGCGTTTCCGAAAGGTGCGCGACGGGCTGAAGGCGCGCTGA

Upstream 100 bases:

>100_bases
TCAGGTGGCGATAGGCCGTCACGTCTGCGACCCTGCGGCCCCGACGGGCAGCGGCCATCGACCATCGAACGGCCTCAATG
CGACTTCAGTAGAGCCTTCC

Downstream 100 bases:

>100_bases
TCAGGCGGTGGTATCGGTGCCGTTGGTCGCCGCGGGCGCGGGCTTCGCGCCGCCCTTCGCAACGCCGACAAGCGCCGGGC
GCAACACGCGTTCGCCGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MRQIARLLAIALVLAATPAAADTVYPRGIRVGVTPMPGMTESKSFLGFETADNGVKVLLAELPGPAFGEVEAAFKAVPEG
AMGKVKPESLETTAGTAYYTAEEGVVGADKVRRYSLIVSGSKAFSGYVAVQVADSAAKTYSDEAVKKMLSSVSVRQQVPV
EEQVAQMPFDIRELGDFKTVRTLAPGAALLLADGNEDTGIEGAPFMVLGLIGSVPEQTDDRARFAQQAAATIPGLRDARI
TTSEPMRIDGLPGFETRIEAVSGKDNTPVTVVQWLRFGNASVAMRVIGSSPRDLWSDAFPRFRKVRDGLKAR

Sequences:

>Translated_312_residues
MRQIARLLAIALVLAATPAAADTVYPRGIRVGVTPMPGMTESKSFLGFETADNGVKVLLAELPGPAFGEVEAAFKAVPEG
AMGKVKPESLETTAGTAYYTAEEGVVGADKVRRYSLIVSGSKAFSGYVAVQVADSAAKTYSDEAVKKMLSSVSVRQQVPV
EEQVAQMPFDIRELGDFKTVRTLAPGAALLLADGNEDTGIEGAPFMVLGLIGSVPEQTDDRARFAQQAAATIPGLRDARI
TTSEPMRIDGLPGFETRIEAVSGKDNTPVTVVQWLRFGNASVAMRVIGSSPRDLWSDAFPRFRKVRDGLKAR
>Mature_312_residues
MRQIARLLAIALVLAATPAAADTVYPRGIRVGVTPMPGMTESKSFLGFETADNGVKVLLAELPGPAFGEVEAAFKAVPEG
AMGKVKPESLETTAGTAYYTAEEGVVGADKVRRYSLIVSGSKAFSGYVAVQVADSAAKTYSDEAVKKMLSSVSVRQQVPV
EEQVAQMPFDIRELGDFKTVRTLAPGAALLLADGNEDTGIEGAPFMVLGLIGSVPEQTDDRARFAQQAAATIPGLRDARI
TTSEPMRIDGLPGFETRIEAVSGKDNTPVTVVQWLRFGNASVAMRVIGSSPRDLWSDAFPRFRKVRDGLKAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33208; Mature: 33208

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQIARLLAIALVLAATPAAADTVYPRGIRVGVTPMPGMTESKSFLGFETADNGVKVLLA
CHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEECCCCEEEEEE
ELPGPAFGEVEAAFKAVPEGAMGKVKPESLETTAGTAYYTAEEGVVGADKVRRYSLIVSG
ECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHEEEEEEEEC
SKAFSGYVAVQVADSAAKTYSDEAVKKMLSSVSVRQQVPVEEQVAQMPFDIRELGDFKTV
CCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCHHHH
RTLAPGAALLLADGNEDTGIEGAPFMVLGLIGSVPEQTDDRARFAQQAAATIPGLRDARI
HHHCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEE
TTSEPMRIDGLPGFETRIEAVSGKDNTPVTVVQWLRFGNASVAMRVIGSSPRDLWSDAFP
CCCCCEEECCCCCHHHHHHEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH
RFRKVRDGLKAR
HHHHHHHHCCCC
>Mature Secondary Structure
MRQIARLLAIALVLAATPAAADTVYPRGIRVGVTPMPGMTESKSFLGFETADNGVKVLLA
CHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEECCCCEEEEEE
ELPGPAFGEVEAAFKAVPEGAMGKVKPESLETTAGTAYYTAEEGVVGADKVRRYSLIVSG
ECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHEEEEEEEEC
SKAFSGYVAVQVADSAAKTYSDEAVKKMLSSVSVRQQVPVEEQVAQMPFDIRELGDFKTV
CCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCHHHH
RTLAPGAALLLADGNEDTGIEGAPFMVLGLIGSVPEQTDDRARFAQQAAATIPGLRDARI
HHHCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEE
TTSEPMRIDGLPGFETRIEAVSGKDNTPVTVVQWLRFGNASVAMRVIGSSPRDLWSDAFP
CCCCCEEECCCCCHHHHHHEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH
RFRKVRDGLKAR
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA