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The map label for this gene is hslV [H]

Identifier: 86747530

GI number: 86747530

Start: 449319

End: 449882

Strand: Reverse

Name: hslV [H]

Synonym: RPB_0404

Alternate gene names: 86747530

Gene position: 449882-449319 (Counterclockwise)

Preceding gene: 86747538

Following gene: 86747529

Centisome position: 8.44

GC content: 66.13

Gene sequence:

>564_bases
ATGTATTCGGCTGCGGGTGAAAGCTCGCCTCAGATTTGGCACGGCACCACCATCCTGACCGTCCGTAAGGGCGGCAAGGT
GGTGATCGGCGGCGACGGCCAGGTTTCGATCGGCCAGACCGTGATCAAGGCCAACGCCAAGAAGGTCCGCAAGCTCGGCA
AGGGAGACGTGATCGGCGGCTTCGCCGGCGCCACCGCCGACGCTTTCACGCTGTTCGAGCGGCTCGAAGCCAAGCTCGAG
CAATATCCCGGGCAGCTCACCCGCGCCGCGGTCGAGCTCGCCAAGGACTGGCGCACCGACCGCTATCTGCGCCGGCTGGA
GGCGATGATGATCGTCGCCGACAAGGACGTCTCGCTGGTGCTGACCGGCACGGGCGACGTGCTGGAGCCGGAATACGGCG
TGATGGCGATCGGCTCCGGCGGCAATTACGCGCTGGCGGCGGCGCGCGCGCTCGCCGACACCGACCAGGACGCCGAAACC
ATCGTTCGCAAGGCGCTCGATATCGCCGCCGACATCTGCGTCTACACCAATCGCAATTTGACCCTTGAGACGCTGACCGC
GTGA

Upstream 100 bases:

>100_bases
GTGACCGGATTTTGCGCTTGCAGCGCGGCCGAGCGCCCGCCGGTTTGCAAGCCGGCCGCACAGTGCCTAGATCAGCCCTC
GCGAAAGGGGTCCTATGACG

Downstream 100 bases:

>100_bases
CCGGTTCTTCCCCTCTCCCCTTGTGGGAGAGGGTGCCCGAGCGAAGCGAGGGCGGGTGAGGGGCAGCCTCTCCGTCTCGC
GACACCCCTCACCCGGCACG

Product: ATP-dependent protease peptidase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MYSAAGESSPQIWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGATADAFTLFERLEAKLE
QYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEYGVMAIGSGGNYALAAARALADTDQDAET
IVRKALDIAADICVYTNRNLTLETLTA

Sequences:

>Translated_187_residues
MYSAAGESSPQIWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGATADAFTLFERLEAKLE
QYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEYGVMAIGSGGNYALAAARALADTDQDAET
IVRKALDIAADICVYTNRNLTLETLTA
>Mature_187_residues
MYSAAGESSPQIWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGATADAFTLFERLEAKLE
QYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEYGVMAIGSGGNYALAAARALADTDQDAET
IVRKALDIAADICVYTNRNLTLETLTA

Specific function: Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery [H]

COG id: COG5405

COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase T1B family. HslV subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790367, Length=172, Percent_Identity=61.6279069767442, Blast_Score=211, Evalue=3e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022281
- InterPro:   IPR001353 [H]

Pfam domain/function: PF00227 Proteasome [H]

EC number: 3.4.25.-

Molecular weight: Translated: 19906; Mature: 19906

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSAAGESSPQIWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGG
CCCCCCCCCCCEEECEEEEEEECCCEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCEECC
FAGATADAFTLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLV
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCEEEE
LTGTGDVLEPEYGVMAIGSGGNYALAAARALADTDQDAETIVRKALDIAADICVYTNRNL
EECCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCE
TLETLTA
EEEEECC
>Mature Secondary Structure
MYSAAGESSPQIWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGG
CCCCCCCCCCCEEECEEEEEEECCCEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCEECC
FAGATADAFTLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLV
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCEEEE
LTGTGDVLEPEYGVMAIGSGGNYALAAARALADTDQDAETIVRKALDIAADICVYTNRNL
EECCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCE
TLETLTA
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA