| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is sam [H]
Identifier: 86747376
GI number: 86747376
Start: 282824
End: 283738
Strand: Reverse
Name: sam [H]
Synonym: RPB_0250
Alternate gene names: 86747376
Gene position: 283738-282824 (Counterclockwise)
Preceding gene: 86747387
Following gene: 86747371
Centisome position: 5.32
GC content: 67.65
Gene sequence:
>915_bases ATGGGGTTGTTCCGGAAAATCTCCATCGGCCCTGACGAACATGGCGCGCAAGCGGCCGGCATTGTCCTGATGTTGCTGGC GATGCTGGCGTTTTCCTTTGCGGACGCAGTCGGCAAGAAGGTGGTGGCGACCTATCCGGTCGGCGAATTCCTGCTGCTGC GGGCGATTGCCGGACTGGTGCTGCTCGCGCCGCTGATCTGGCGGCAGCGCGCGGCCTTCATCCGGCTGGAGCGGCCGGGG CTGCAACTGGCGCGGATGCTGGTCTCGGCGTTCGAGGTCGCGGCGTTCTTCCTCGCCACGGTGTATCTGCCGCTCGCCGA TGTCATCACGTTCTATCTGGCGTCGGCGCTGTTCGTGTCGGTCGGGGCCGCCTTGTTTCTCGGCGAGACGATCGACCGGG CGCGGGCGATCGCAATCCTGGTCGGCTTTGCCGGCGTGCTGATCGCATTGCAGCCGTCGCCGCAAACCATGAGCTGGCCG GCGCTGATCGCGATCCTCGCCAGCGTGCTGTTCGCGGCGCTGATGCTGATCACCCGGTTTCTGCGGCGCACGCCGGAGAT CGCGCTGGCGACGCAGCAATTCATCGGCACCGCACTGCTCGGCTCGGTGCTGCTGGCGCCGTCCGGCTGGATTGCGCCGC CGCCGGCCGACTGGATCTGGTTCGTGCTCGCGGGTGTCGGCTCGGCCGCGGGGCTGTTGTGCGTCAACCGCTCGCTGCGG TTGGCGCCCGCGAGCGTCGTGGTGCCGTATCAATATACGATGATCATCTTCGCCGCGGCGCTCGGCTGGCTGTTCTTCGG CGACGTCCCGACGCTGTCGACGCTGGTCGGCGTCGTCGTTATCGTCGGCGCGGGCCTGTATCTCGCGCTGCGCGACCGCA AGACGGCGGACGAGGCGCCGCCGCAAACGAACTGA
Upstream 100 bases:
>100_bases GTGAGCCGCGGTCGGCCATCGGCCTTGCGCCGCCGCGAGGCTCCGGGCCATAAGCGCCCGCTGTCGAGCTGTTCCGGTTC GCAAGGTGCCAGAGCGAGAT
Downstream 100 bases:
>100_bases CGCCCGTTACTCGATTGTCAGTTTGAGGCCGGCGAAGCGCGCGGTGAGTTGGCGGGCGCGTTCGCGGCGCTCCTCTGCCA GCAGGCGGCGCTCGCGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MGLFRKISIGPDEHGAQAAGIVLMLLAMLAFSFADAVGKKVVATYPVGEFLLLRAIAGLVLLAPLIWRQRAAFIRLERPG LQLARMLVSAFEVAAFFLATVYLPLADVITFYLASALFVSVGAALFLGETIDRARAIAILVGFAGVLIALQPSPQTMSWP ALIAILASVLFAALMLITRFLRRTPEIALATQQFIGTALLGSVLLAPSGWIAPPPADWIWFVLAGVGSAAGLLCVNRSLR LAPASVVVPYQYTMIIFAAALGWLFFGDVPTLSTLVGVVVIVGAGLYLALRDRKTADEAPPQTN
Sequences:
>Translated_304_residues MGLFRKISIGPDEHGAQAAGIVLMLLAMLAFSFADAVGKKVVATYPVGEFLLLRAIAGLVLLAPLIWRQRAAFIRLERPG LQLARMLVSAFEVAAFFLATVYLPLADVITFYLASALFVSVGAALFLGETIDRARAIAILVGFAGVLIALQPSPQTMSWP ALIAILASVLFAALMLITRFLRRTPEIALATQQFIGTALLGSVLLAPSGWIAPPPADWIWFVLAGVGSAAGLLCVNRSLR LAPASVVVPYQYTMIIFAAALGWLFFGDVPTLSTLVGVVVIVGAGLYLALRDRKTADEAPPQTN >Mature_303_residues GLFRKISIGPDEHGAQAAGIVLMLLAMLAFSFADAVGKKVVATYPVGEFLLLRAIAGLVLLAPLIWRQRAAFIRLERPGL QLARMLVSAFEVAAFFLATVYLPLADVITFYLASALFVSVGAALFLGETIDRARAIAILVGFAGVLIALQPSPQTMSWPA LIAILASVLFAALMLITRFLRRTPEIALATQQFIGTALLGSVLLAPSGWIAPPPADWIWFVLAGVGSAAGLLCVNRSLRL APASVVVPYQYTMIIFAAALGWLFFGDVPTLSTLVGVVVIVGAGLYLALRDRKTADEAPPQTN
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32304; Mature: 32173
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFRKISIGPDEHGAQAAGIVLMLLAMLAFSFADAVGKKVVATYPVGEFLLLRAIAGLV CCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHH LLAPLIWRQRAAFIRLERPGLQLARMLVSAFEVAAFFLATVYLPLADVITFYLASALFVS HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGAALFLGETIDRARAIAILVGFAGVLIALQPSPQTMSWPALIAILASVLFAALMLITRF HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LRRTPEIALATQQFIGTALLGSVLLAPSGWIAPPPADWIWFVLAGVGSAAGLLCVNRSLR HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCE LAPASVVVPYQYTMIIFAAALGWLFFGDVPTLSTLVGVVVIVGAGLYLALRDRKTADEAP ECCCCEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHEEEECCCCCCCCC PQTN CCCC >Mature Secondary Structure GLFRKISIGPDEHGAQAAGIVLMLLAMLAFSFADAVGKKVVATYPVGEFLLLRAIAGLV CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHH LLAPLIWRQRAAFIRLERPGLQLARMLVSAFEVAAFFLATVYLPLADVITFYLASALFVS HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGAALFLGETIDRARAIAILVGFAGVLIALQPSPQTMSWPALIAILASVLFAALMLITRF HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LRRTPEIALATQQFIGTALLGSVLLAPSGWIAPPPADWIWFVLAGVGSAAGLLCVNRSLR HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCE LAPASVVVPYQYTMIIFAAALGWLFFGDVPTLSTLVGVVVIVGAGLYLALRDRKTADEAP ECCCCEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHEEEECCCCCCCCC PQTN CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA