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The map label for this gene is ycaC [H]

Identifier: 86747314

GI number: 86747314

Start: 207040

End: 207690

Strand: Reverse

Name: ycaC [H]

Synonym: RPB_0188

Alternate gene names: 86747314

Gene position: 207690-207040 (Counterclockwise)

Preceding gene: 86747317

Following gene: 86747313

Centisome position: 3.9

GC content: 62.06

Gene sequence:

>651_bases
ATGTCGAAACTGGATATGTTGACCCCGGACAACAGTGCGATCGCGCTGATCGACTATCAGCCGGCGATGTATCAGGGCGT
GCAGTCCCACGACCGGCTCGTCGTGTTCAACAACATCCAGATTCTCGCCAAGGCGGCGAAGCTGTTCAAGATCCCGACCG
TGCTGACCACGGTGGCCAAGGATTCGTTCTCCGGCCCGTTCATGCCCGAAGTCACCGATCTGTTTCCGAGCCACGACATC
ATCGACCGCACCTCGATGAATTCCTGGCTCGACCCGAATTTTCGCAAGGCGGTGGCAGCGACCGGTCGCAAGAAGTTCGT
GATCGCGGGACTGTGGACCGAAGCCTGCGTGATGTTTCCGACCCTCGATATGCTGAAGGAAGGCTTCGAGATCTACATCC
CGGCCGACGCCTGCGGCGACCTGTCGGTGGAAGCGCACAACCGCTCGATGGAGCGGGCGATCCAGGCCGGCGCGGTGCCG
ATCACCTCGTGCCAGTATGCGTTCGAGCTGCAGCAGGATTGGGCGCGCAGCGAAACCTACGAGGGCATGATGGACATTCT
GCGCGCGCACTCGCCCTACGGCATCCAGATCCGCTTCTCGAAATGGGCGCTCGGCGAGCACGCCTCCGAGGGCGGCACCA
AGGCCGCGTAG

Upstream 100 bases:

>100_bases
TGCAATCGGCGATGGGTCCGTCCAAGCGCGGTTCGGCACGAGGGGGCATGATCGCGACCAGACGCTTTGCGGCGCTCGTT
CACGAACTCGGAGAGACACG

Downstream 100 bases:

>100_bases
CAGCCGTGCGGCGCGGAAACGCGCGATGAAGCTCTATCTGCTGTCGCTCGGCGCCGGCCTTCTGGTCGGCGTCATCTACA
GCCTGCTCGACGTCCGCTCG

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSKLDMLTPDNSAIALIDYQPAMYQGVQSHDRLVVFNNIQILAKAAKLFKIPTVLTTVAKDSFSGPFMPEVTDLFPSHDI
IDRTSMNSWLDPNFRKAVAATGRKKFVIAGLWTEACVMFPTLDMLKEGFEIYIPADACGDLSVEAHNRSMERAIQAGAVP
ITSCQYAFELQQDWARSETYEGMMDILRAHSPYGIQIRFSKWALGEHASEGGTKAA

Sequences:

>Translated_216_residues
MSKLDMLTPDNSAIALIDYQPAMYQGVQSHDRLVVFNNIQILAKAAKLFKIPTVLTTVAKDSFSGPFMPEVTDLFPSHDI
IDRTSMNSWLDPNFRKAVAATGRKKFVIAGLWTEACVMFPTLDMLKEGFEIYIPADACGDLSVEAHNRSMERAIQAGAVP
ITSCQYAFELQQDWARSETYEGMMDILRAHSPYGIQIRFSKWALGEHASEGGTKAA
>Mature_215_residues
SKLDMLTPDNSAIALIDYQPAMYQGVQSHDRLVVFNNIQILAKAAKLFKIPTVLTTVAKDSFSGPFMPEVTDLFPSHDII
DRTSMNSWLDPNFRKAVAATGRKKFVIAGLWTEACVMFPTLDMLKEGFEIYIPADACGDLSVEAHNRSMERAIQAGAVPI
TSCQYAFELQQDWARSETYEGMMDILRAHSPYGIQIRFSKWALGEHASEGGTKAA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=187, Percent_Identity=35.2941176470588, Blast_Score=119, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 24001; Mature: 23870

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLDMLTPDNSAIALIDYQPAMYQGVQSHDRLVVFNNIQILAKAAKLFKIPTVLTTVAK
CCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH
DSFSGPFMPEVTDLFPSHDIIDRTSMNSWLDPNFRKAVAATGRKKFVIAGLWTEACVMFP
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEHHHHHHHHHC
TLDMLKEGFEIYIPADACGDLSVEAHNRSMERAIQAGAVPITSCQYAFELQQDWARSETY
CHHHHHCCCEEEECCCCCCCCEEHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHH
EGMMDILRAHSPYGIQIRFSKWALGEHASEGGTKAA
HHHHHHHHCCCCCEEEEEEECEECCCCCCCCCCCCC
>Mature Secondary Structure 
SKLDMLTPDNSAIALIDYQPAMYQGVQSHDRLVVFNNIQILAKAAKLFKIPTVLTTVAK
CCCCCCCCCCCEEEEEECCHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH
DSFSGPFMPEVTDLFPSHDIIDRTSMNSWLDPNFRKAVAATGRKKFVIAGLWTEACVMFP
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEHHHHHHHHHC
TLDMLKEGFEIYIPADACGDLSVEAHNRSMERAIQAGAVPITSCQYAFELQQDWARSETY
CHHHHHCCCEEEECCCCCCCCEEHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHH
EGMMDILRAHSPYGIQIRFSKWALGEHASEGGTKAA
HHHHHHHHCCCCCEEEEEEECEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]