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The map label for this gene is ytcJ [H]

Identifier: 86747261

GI number: 86747261

Start: 145020

End: 146663

Strand: Reverse

Name: ytcJ [H]

Synonym: RPB_0134

Alternate gene names: 86747261

Gene position: 146663-145020 (Counterclockwise)

Preceding gene: 86747263

Following gene: 86747260

Centisome position: 2.75

GC content: 67.7

Gene sequence:

>1644_bases
GTGAACCACGACACCGTCGTCTACTCGGCCCGCAACATCATCACGATGAACCCGTCGCGTCCCGCTGCTACGCATGTTGC
GGTGCGAGACGGGCGGATCGTCGCAACCGGCACGGCGGGCGAGTTGTGCGTCGGCGGCGCGCGGCTCGACAATCGTTTCG
CCGACAAGGTGTTGATGCCGGGCTTCGTCGAGGGCCACAGCCACATCATGGAAGGCCTGATGTGGAAGCTTCCCTATATC
GGCGCGTTCGACCGCCGCTCGCCGGAAGGCCGCATTGTCGCCGGTGTCCCCGACATCGATGCGATCGTCGCGCGGCTGCA
GCAGGCCGAAGCGCTGCTGCAGGAGCCCAACACGCCGCTGTTCGCCTGGGGCTTCGATCCGCTGCATATCGGCGGCAAGA
TGCTGACGCGCCAGGACCTCGACCGGGTGTCGACGACGCGCCCGGTGGTCGTCGTCCACGCCTCGTTCCACATCAACAAC
GTCAACACCACGACGCTGGAGCGCGCCGAGCTGTTGCACGCCACCAATATCTCCGGCGTCGTCGCCGGCGCCGACGGCCT
CGCCAGCGGCGAACTGCAGGGCATCCCGGCGCGGATGCGGCTGTTTCGGTCGCTCGGCAACAATCCGCAGACCGGCAACA
TCACCGCCGCCGATGTCGCGCGCTATGCCGCTTCGTGCTGCGTCCAGGGCGTCACCACGGTCACCGATCTGCACAACGAC
ATGTCCGACCAGACCGTCGAGGTGTATCGCGCCGCGACCGAGGCCGCCGATTTCGGCGTGCGATTAGTTCCGGCGCTGGC
CGCGGTGTCGCACACGCCGGAGCAGGGCGTCGCCAAGATCGAGGCGCTGCGCCAAGGCGGCAACGACCGGCTGCATTACG
GCATCGTCAAGCTGGTGGTCGACGGTTCGATCCAGGGTTTCACCGCGCGGCTGCGCTGGCCCGGTTATCACAACGGCGTC
GCCAACGGGCTGTGGTACATCGCGCCGGAGGAACTGCCGCGGCTGGTCGGCGCGTATCACCGCGCCGGCATCCAGCTCCA
CATCCACACCAATGGCGACGAAGCCACCGAACTCGCGCTCGATGCCATCGAGGCGGCGCAGATCGATACCCCTCGGCCTG
ATCACCGTCATACGCTGCAGCACTGCCAGATGGCCGACGCCGCGCAATTCCGGCGGATGAAGGCGCTCGGCGTCTGCGCC
AATTTGTTCGCCAATCACGTCTACTACTGGGGCGACTCGCACTACGAACTGACGATGGGCCCGGAGCGCGCCGCAAGGCT
CGACGCCACCGGCACGGCGCAGCGCATCGGCGTGCCGTTCGCGATCCATTCGGACGCGCCGGTAACGCCGCTGGCGCCGC
TGTTCACGGCGTGGTGCGCCGTCAACCGGGTCACTTCGGGCGGTCGGGTGCTCGGCCGCGACACCGAGGCTCTGACAGTG
CCGCAGGCGCTCGCGGCGATCACCATCGGGGCGGCCTATACGCTGAAGATGGATCATCTGGTCGGCAGCATCGAGACCGG
CAAATTCGCCGATTTCGTCGTGCTGGAGGATGATCCGCTCACGGTGGCGCCGGAGCGGCTGAAGGACATCGCGATCTGGG
GCACCGTGGTCGGCGGCGTCGTCCGGGAGGCGCCCCGGGCATGA

Upstream 100 bases:

>100_bases
GGCGGATGGCACTGGCTCCATTCGTGCGGGGCATCTGGCGCTAGTGCGGTCCGGTGGATCGCTTCACGTTCGCAACTGAA
ATCCGGAGAGGCTCAGCAGC

Downstream 100 bases:

>100_bases
CGGGATCGTCCGCGACCATTCCCGTCACGGTGATCGGCGGCTTTCTCGGCGCCGGCAAAACCACTTTCGTCAATCATCTG
CTCGCCACCGGCAGCCCGCG

Product: amidohydrolase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MNHDTVVYSARNIITMNPSRPAATHVAVRDGRIVATGTAGELCVGGARLDNRFADKVLMPGFVEGHSHIMEGLMWKLPYI
GAFDRRSPEGRIVAGVPDIDAIVARLQQAEALLQEPNTPLFAWGFDPLHIGGKMLTRQDLDRVSTTRPVVVVHASFHINN
VNTTTLERAELLHATNISGVVAGADGLASGELQGIPARMRLFRSLGNNPQTGNITAADVARYAASCCVQGVTTVTDLHND
MSDQTVEVYRAATEAADFGVRLVPALAAVSHTPEQGVAKIEALRQGGNDRLHYGIVKLVVDGSIQGFTARLRWPGYHNGV
ANGLWYIAPEELPRLVGAYHRAGIQLHIHTNGDEATELALDAIEAAQIDTPRPDHRHTLQHCQMADAAQFRRMKALGVCA
NLFANHVYYWGDSHYELTMGPERAARLDATGTAQRIGVPFAIHSDAPVTPLAPLFTAWCAVNRVTSGGRVLGRDTEALTV
PQALAAITIGAAYTLKMDHLVGSIETGKFADFVVLEDDPLTVAPERLKDIAIWGTVVGGVVREAPRA

Sequences:

>Translated_547_residues
MNHDTVVYSARNIITMNPSRPAATHVAVRDGRIVATGTAGELCVGGARLDNRFADKVLMPGFVEGHSHIMEGLMWKLPYI
GAFDRRSPEGRIVAGVPDIDAIVARLQQAEALLQEPNTPLFAWGFDPLHIGGKMLTRQDLDRVSTTRPVVVVHASFHINN
VNTTTLERAELLHATNISGVVAGADGLASGELQGIPARMRLFRSLGNNPQTGNITAADVARYAASCCVQGVTTVTDLHND
MSDQTVEVYRAATEAADFGVRLVPALAAVSHTPEQGVAKIEALRQGGNDRLHYGIVKLVVDGSIQGFTARLRWPGYHNGV
ANGLWYIAPEELPRLVGAYHRAGIQLHIHTNGDEATELALDAIEAAQIDTPRPDHRHTLQHCQMADAAQFRRMKALGVCA
NLFANHVYYWGDSHYELTMGPERAARLDATGTAQRIGVPFAIHSDAPVTPLAPLFTAWCAVNRVTSGGRVLGRDTEALTV
PQALAAITIGAAYTLKMDHLVGSIETGKFADFVVLEDDPLTVAPERLKDIAIWGTVVGGVVREAPRA
>Mature_547_residues
MNHDTVVYSARNIITMNPSRPAATHVAVRDGRIVATGTAGELCVGGARLDNRFADKVLMPGFVEGHSHIMEGLMWKLPYI
GAFDRRSPEGRIVAGVPDIDAIVARLQQAEALLQEPNTPLFAWGFDPLHIGGKMLTRQDLDRVSTTRPVVVVHASFHINN
VNTTTLERAELLHATNISGVVAGADGLASGELQGIPARMRLFRSLGNNPQTGNITAADVARYAASCCVQGVTTVTDLHND
MSDQTVEVYRAATEAADFGVRLVPALAAVSHTPEQGVAKIEALRQGGNDRLHYGIVKLVVDGSIQGFTARLRWPGYHNGV
ANGLWYIAPEELPRLVGAYHRAGIQLHIHTNGDEATELALDAIEAAQIDTPRPDHRHTLQHCQMADAAQFRRMKALGVCA
NLFANHVYYWGDSHYELTMGPERAARLDATGTAQRIGVPFAIHSDAPVTPLAPLFTAWCAVNRVTSGGRVLGRDTEALTV
PQALAAITIGAAYTLKMDHLVGSIETGKFADFVVLEDDPLTVAPERLKDIAIWGTVVGGVVREAPRA

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 58942; Mature: 58942

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHDTVVYSARNIITMNPSRPAATHVAVRDGRIVATGTAGELCVGGARLDNRFADKVLMP
CCCCEEEEECCEEEEECCCCCCEEEEEEECCEEEEECCCCCEEECCCHHHHHHHHHHCCC
GFVEGHSHIMEGLMWKLPYIGAFDRRSPEGRIVAGVPDIDAIVARLQQAEALLQEPNTPL
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCE
FAWGFDPLHIGGKMLTRQDLDRVSTTRPVVVVHASFHINNVNTTTLERAELLHATNISGV
EEECCCHHHCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCEE
VAGADGLASGELQGIPARMRLFRSLGNNPQTGNITAADVARYAASCCVQGVTTVTDLHND
EECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCHHHHHHHHCC
MSDQTVEVYRAATEAADFGVRLVPALAAVSHTPEQGVAKIEALRQGGNDRLHYGIVKLVV
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEE
DGSIQGFTARLRWPGYHNGVANGLWYIAPEELPRLVGAYHRAGIQLHIHTNGDEATELAL
CCCCCCEEEEEECCCCCCCHHCCEEEECHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHH
DAIEAAQIDTPRPDHRHTLQHCQMADAAQFRRMKALGVCANLFANHVYYWGDSHYELTMG
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEEC
PERAARLDATGTAQRIGVPFAIHSDAPVTPLAPLFTAWCAVNRVTSGGRVLGRDTEALTV
HHHHHCCCCCCCHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEH
PQALAAITIGAAYTLKMDHLVGSIETGKFADFVVLEDDPLTVAPERLKDIAIWGTVVGGV
HHHHHHHHCCCEEEEEEHHHHCCCCCCCCEEEEEECCCCCEECHHHHHHHHHHHHHHHHH
VREAPRA
HHHCCCC
>Mature Secondary Structure
MNHDTVVYSARNIITMNPSRPAATHVAVRDGRIVATGTAGELCVGGARLDNRFADKVLMP
CCCCEEEEECCEEEEECCCCCCEEEEEEECCEEEEECCCCCEEECCCHHHHHHHHHHCCC
GFVEGHSHIMEGLMWKLPYIGAFDRRSPEGRIVAGVPDIDAIVARLQQAEALLQEPNTPL
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCE
FAWGFDPLHIGGKMLTRQDLDRVSTTRPVVVVHASFHINNVNTTTLERAELLHATNISGV
EEECCCHHHCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCEE
VAGADGLASGELQGIPARMRLFRSLGNNPQTGNITAADVARYAASCCVQGVTTVTDLHND
EECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCHHHHHHHHCC
MSDQTVEVYRAATEAADFGVRLVPALAAVSHTPEQGVAKIEALRQGGNDRLHYGIVKLVV
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEE
DGSIQGFTARLRWPGYHNGVANGLWYIAPEELPRLVGAYHRAGIQLHIHTNGDEATELAL
CCCCCCEEEEEECCCCCCCHHCCEEEECHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHH
DAIEAAQIDTPRPDHRHTLQHCQMADAAQFRRMKALGVCANLFANHVYYWGDSHYELTMG
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEEC
PERAARLDATGTAQRIGVPFAIHSDAPVTPLAPLFTAWCAVNRVTSGGRVLGRDTEALTV
HHHHHCCCCCCCHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEH
PQALAAITIGAAYTLKMDHLVGSIETGKFADFVVLEDDPLTVAPERLKDIAIWGTVVGGV
HHHHHHHHCCCEEEEEEHHHHCCCCCCCCEEEEEECCCCCEECHHHHHHHHHHHHHHHHH
VREAPRA
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]