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The map label for this gene is 86747252

Identifier: 86747252

GI number: 86747252

Start: 135195

End: 135911

Strand: Reverse

Name: 86747252

Synonym: RPB_0125

Alternate gene names: NA

Gene position: 135911-135195 (Counterclockwise)

Preceding gene: 86747255

Following gene: 86747249

Centisome position: 2.55

GC content: 63.74

Gene sequence:

>717_bases
ATGGCCAGCGAAACGGACGTCGCGGCGCGGGAACTCGCGGCTCCTCGCCGCAAGGCTGCGGCGAAGCGAAACACCTCGGC
AAAGCCGCGCCGCCGGACCCGGACGCCGGATCAGACGCGCGAGGCATTGTTGCGCGCCGCGATCGCCGAATTCGCGCGGG
AAGGCTACGGCGGCGCGCGGGTCGACCGCATCAGCAAGGCGGCGAAGAGCAACGATCGCATGCTGTATTATTACTTCGTC
AGCAAGGAGAAGCTGTTCCACCACGTCATCGAGCACTGCTATGCTCAGCTCGTCGCAAGCGAGGAGGCGCTCGACCTCGA
TCTGACGCGGCCGCGCGAAGCGCTCGCCGCGCTGGTCGCGTTCAACTGGCAGTACTATTGGGAAAATCCGGAGCTGCTCA
GCATCCTCGCGTCGGAAAATCTGTTCAAGGGGCGCCACGTCAAGAACAAGATCCGCGACGTGTTCGCCAATGCCCAGTTC
GGCCTGCTCGAACGGATCTTGAACGCCGGCATCGACCGGCGGGACTTCCGGCCGGACTGCGACCGCACCTTCATCTATCT
CTCGATCCTGTCGCTGACCTATTTCTATCGGTCGAACCTCTACACGCTGTCGAACTACATGCAGATCGACCTCGCCGATC
AGGAGCGGCGCAAGGCCTGGCTGGCCCACGTCCAGGCGATGATCGAGGATCTGGTTCGGCGCCGGGACGATCGCTGA

Upstream 100 bases:

>100_bases
TGGAGGTATTGTCAACGCCCAAGAAGTGGCAAGGCTTGCCAAAAGAACGGGCAAACCTATGATCCCGGCGCCGACTCAGG
CGGGCTCGAGGTGGGGACGG

Downstream 100 bases:

>100_bases
TGTGCTGCCGGGAGTTCGGCGATGCGCGCTCCGGCGGTGCCGGATGAGCCCGTCGGCCGGTGCTACGCCGTGGTGTCGAG
CAACGCCTTGGTCATGTCGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator TetR Family Protein; TetR Family Regulatory Protein; Transcriptional Regulator TetR/ArcR Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator Tetr Family; TetR-Family Transcriptional Regulator; TetR-Family Transcriptional Regulatory Protein; TRANSCRIPTIONal REGULATOR TetR Family; Transcription Regulator Protein Tetr-Like; Transcription Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MASETDVAARELAAPRRKAAAKRNTSAKPRRRTRTPDQTREALLRAAIAEFAREGYGGARVDRISKAAKSNDRMLYYYFV
SKEKLFHHVIEHCYAQLVASEEALDLDLTRPREALAALVAFNWQYYWENPELLSILASENLFKGRHVKNKIRDVFANAQF
GLLERILNAGIDRRDFRPDCDRTFIYLSILSLTYFYRSNLYTLSNYMQIDLADQERRKAWLAHVQAMIEDLVRRRDDR

Sequences:

>Translated_238_residues
MASETDVAARELAAPRRKAAAKRNTSAKPRRRTRTPDQTREALLRAAIAEFAREGYGGARVDRISKAAKSNDRMLYYYFV
SKEKLFHHVIEHCYAQLVASEEALDLDLTRPREALAALVAFNWQYYWENPELLSILASENLFKGRHVKNKIRDVFANAQF
GLLERILNAGIDRRDFRPDCDRTFIYLSILSLTYFYRSNLYTLSNYMQIDLADQERRKAWLAHVQAMIEDLVRRRDDR
>Mature_237_residues
ASETDVAARELAAPRRKAAAKRNTSAKPRRRTRTPDQTREALLRAAIAEFAREGYGGARVDRISKAAKSNDRMLYYYFVS
KEKLFHHVIEHCYAQLVASEEALDLDLTRPREALAALVAFNWQYYWENPELLSILASENLFKGRHVKNKIRDVFANAQFG
LLERILNAGIDRRDFRPDCDRTFIYLSILSLTYFYRSNLYTLSNYMQIDLADQERRKAWLAHVQAMIEDLVRRRDDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27797; Mature: 27666

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASETDVAARELAAPRRKAAAKRNTSAKPRRRTRTPDQTREALLRAAIAEFAREGYGGAR
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHH
VDRISKAAKSNDRMLYYYFVSKEKLFHHVIEHCYAQLVASEEALDLDLTRPREALAALVA
HHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHH
FNWQYYWENPELLSILASENLFKGRHVKNKIRDVFANAQFGLLERILNAGIDRRDFRPDC
HCCEEEECCHHHHHHHHHCCHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCC
DRTFIYLSILSLTYFYRSNLYTLSNYMQIDLADQERRKAWLAHVQAMIEDLVRRRDDR
CHHHHHHHHHHHHHHHHCCHHEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ASETDVAARELAAPRRKAAAKRNTSAKPRRRTRTPDQTREALLRAAIAEFAREGYGGAR
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHH
VDRISKAAKSNDRMLYYYFVSKEKLFHHVIEHCYAQLVASEEALDLDLTRPREALAALVA
HHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHH
FNWQYYWENPELLSILASENLFKGRHVKNKIRDVFANAQFGLLERILNAGIDRRDFRPDC
HCCEEEECCHHHHHHHHHCCHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCC
DRTFIYLSILSLTYFYRSNLYTLSNYMQIDLADQERRKAWLAHVQAMIEDLVRRRDDR
CHHHHHHHHHHHHHHHHCCHHEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA