| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747242
Identifier: 86747242
GI number: 86747242
Start: 124958
End: 126376
Strand: Reverse
Name: 86747242
Synonym: RPB_0115
Alternate gene names: NA
Gene position: 126376-124958 (Counterclockwise)
Preceding gene: 86747243
Following gene: 86747241
Centisome position: 2.37
GC content: 65.68
Gene sequence:
>1419_bases ATGAAGGCCATGACCGACGTTCGACCTCTCTACACCGTGCTGCGGCAGACCACCGAGGCCCCCGTCGTCGACGCCATCGC GCATCTGATCGCCGATGGCGCCGACAGCGAGCTCAACCGCATCAACGTGCTGGAATTCGCGACGCGCACCGGCCTCGACG AGGAGAAGGTGATCTCCGGCTTTCTGCATGCGGCCCAGCTCGGTCTGTTCGACATGAGCTGGAACGTGTTGTGCCCGGGC TGCAGCGGCGTGCTCGACAGCCATCCGTCGCTGAAGGCGCTGAGGCACGACGAATACACCTGCGCGCTGTGTGCGAAAGC CTATGAGGCGTCGGTCGACGATCAGGTCGAGGCCGCCTTCACCGTCAGTCCGGGCATCCGCCGGATCGGCGCGCACGATC CCGACAGCCTGCCGCTATGGGACTACACCCGGCAGATGTTCTGGAGCTCCGGCATCGAGCTCGACGAGGATGTGCTGGCG CGGCTGTCCGATCAGGACACGCTGGGCGCCGCGGCGCTGCAGCCCGGCGAGACCGCCGAGCTGTCGATCGCTCTGCCGAG CGAGTTCATCATCGTCTTCGAGCCGGTGACGCATTCGGCGCAGTTCATCGACGTCGCCGGGGAGCCGACCGACGAAGTGC AATCGCTGGCGCTGAGCTTCGAGCGCCAGCACCCGCTGACGCCGACATTGTCGCTGCGGCCGGGGCCGCTGAAACTGTCG CTGACCAACCATGCGGACAAGCGGGTGATACCCGCGGTCTGGGTCGCCGCAGACGCGCTGCATACGCTGCTCGGCAAGCG CAAGCCGATCCTCACCGCGAAGCGGATGCTGACCAATCAGACCTTCCGCGACGTCTTCAAGGCCGACAACCTCAGTCCCG ACCAGCGGCTGAAGATCACCTCGCTGACCTTCCTGTTCACCGATCTCAAGGGCTCCACGGCGCTGTATCAGCGCGTCGGC GACCTCAAAGCGTTCGATCTGGTGCGGGCGCATTTCCGCGCGCTGCTCGAGATCATCGCCGCCGAAAAGGGCGCGGTGGT GAAGACCATCGGCGACGCGGTGATGGCGACCTTCAACCGCCCCGAGGACGCGCTCGCCGCCGCGCTGCGGATGCGCGAGG CGATGGATGCGCTCAACGAGGAACGCGGCACCCGGGATCTGGTGGTGAAGATCGGCATTCACGAAGGCCCGTGCCTTGCG GTGATGCTGAACGAGCGGCAGGATTATTTCGGCCAGACCGTCAACATCGCGGCGCGCGTTCTCGGCCTCGCCACCACCCA GGCGATTCATCTCACCGGGGCGGTAATCGATACGCCGGCGGTCACCGCGATGCTCGATCGCGAGGCGATCGCGCCGATCG AAAAGCACGCCGCGCTGCGCGGCATTGCCGACAAGGTGCTGGTCTATGAAATTCCTTAA
Upstream 100 bases:
>100_bases CGATCGGCATCGTCACCACCCAGCCGGACCGCTCGCCGATGTTCAGGCTCACGCGCCGGTGATCAAGGCTTCATTTGGCT GAAATCGAGACGTGACCTAA
Downstream 100 bases:
>100_bases CGCATTGGCGACATTGCCGAACCGTCATGAAGCCCGCCGGAACCCGGCCGGATTGCCAACGTTACGATTTCGCCTCATCA AGCGAGCCTGAGTTCGCCCC
Product: adenylate/guanylate cyclase
Products: NA
Alternate protein names: Adenylate Cyclase; Adenylate/Guanylate Cyclase Protein; Guanylate/Adenylate Cyclase; Adenylate Cyclase Protein; Serine/Threonine Protein Kinase; Adenylate Cyclase Domain-Containing Protein
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MKAMTDVRPLYTVLRQTTEAPVVDAIAHLIADGADSELNRINVLEFATRTGLDEEKVISGFLHAAQLGLFDMSWNVLCPG CSGVLDSHPSLKALRHDEYTCALCAKAYEASVDDQVEAAFTVSPGIRRIGAHDPDSLPLWDYTRQMFWSSGIELDEDVLA RLSDQDTLGAAALQPGETAELSIALPSEFIIVFEPVTHSAQFIDVAGEPTDEVQSLALSFERQHPLTPTLSLRPGPLKLS LTNHADKRVIPAVWVAADALHTLLGKRKPILTAKRMLTNQTFRDVFKADNLSPDQRLKITSLTFLFTDLKGSTALYQRVG DLKAFDLVRAHFRALLEIIAAEKGAVVKTIGDAVMATFNRPEDALAAALRMREAMDALNEERGTRDLVVKIGIHEGPCLA VMLNERQDYFGQTVNIAARVLGLATTQAIHLTGAVIDTPAVTAMLDREAIAPIEKHAALRGIADKVLVYEIP
Sequences:
>Translated_472_residues MKAMTDVRPLYTVLRQTTEAPVVDAIAHLIADGADSELNRINVLEFATRTGLDEEKVISGFLHAAQLGLFDMSWNVLCPG CSGVLDSHPSLKALRHDEYTCALCAKAYEASVDDQVEAAFTVSPGIRRIGAHDPDSLPLWDYTRQMFWSSGIELDEDVLA RLSDQDTLGAAALQPGETAELSIALPSEFIIVFEPVTHSAQFIDVAGEPTDEVQSLALSFERQHPLTPTLSLRPGPLKLS LTNHADKRVIPAVWVAADALHTLLGKRKPILTAKRMLTNQTFRDVFKADNLSPDQRLKITSLTFLFTDLKGSTALYQRVG DLKAFDLVRAHFRALLEIIAAEKGAVVKTIGDAVMATFNRPEDALAAALRMREAMDALNEERGTRDLVVKIGIHEGPCLA VMLNERQDYFGQTVNIAARVLGLATTQAIHLTGAVIDTPAVTAMLDREAIAPIEKHAALRGIADKVLVYEIP >Mature_472_residues MKAMTDVRPLYTVLRQTTEAPVVDAIAHLIADGADSELNRINVLEFATRTGLDEEKVISGFLHAAQLGLFDMSWNVLCPG CSGVLDSHPSLKALRHDEYTCALCAKAYEASVDDQVEAAFTVSPGIRRIGAHDPDSLPLWDYTRQMFWSSGIELDEDVLA RLSDQDTLGAAALQPGETAELSIALPSEFIIVFEPVTHSAQFIDVAGEPTDEVQSLALSFERQHPLTPTLSLRPGPLKLS LTNHADKRVIPAVWVAADALHTLLGKRKPILTAKRMLTNQTFRDVFKADNLSPDQRLKITSLTFLFTDLKGSTALYQRVG DLKAFDLVRAHFRALLEIIAAEKGAVVKTIGDAVMATFNRPEDALAAALRMREAMDALNEERGTRDLVVKIGIHEGPCLA VMLNERQDYFGQTVNIAARVLGLATTQAIHLTGAVIDTPAVTAMLDREAIAPIEKHAALRGIADKVLVYEIP
Specific function: Unknown
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51529; Mature: 51529
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAMTDVRPLYTVLRQTTEAPVVDAIAHLIADGADSELNRINVLEFATRTGLDEEKVISG CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHH FLHAAQLGLFDMSWNVLCPGCSGVLDSHPSLKALRHDEYTCALCAKAYEASVDDQVEAAF HHHHHHHCEEECCCCEECCCCCCHHCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCEEE TVSPGIRRIGAHDPDSLPLWDYTRQMFWSSGIELDEDVLARLSDQDTLGAAALQPGETAE EECCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHCCCCCCCE LSIALPSEFIIVFEPVTHSAQFIDVAGEPTDEVQSLALSFERQHPLTPTLSLRPGPLKLS EEEECCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEECCCCCEEEE LTNHADKRVIPAVWVAADALHTLLGKRKPILTAKRMLTNQTFRDVFKADNLSPDQRLKIT ECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE SLTFLFTDLKGSTALYQRVGDLKAFDLVRAHFRALLEIIAAEKGAVVKTIGDAVMATFNR EEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC PEDALAAALRMREAMDALNEERGTRDLVVKIGIHEGPCLAVMLNERQDYFGQTVNIAARV CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCHHHHCHHHHHHHHH LGLATTQAIHLTGAVIDTPAVTAMLDREAIAPIEKHAALRGIADKVLVYEIP HHHHHHHEEEEECCEECCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure MKAMTDVRPLYTVLRQTTEAPVVDAIAHLIADGADSELNRINVLEFATRTGLDEEKVISG CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHH FLHAAQLGLFDMSWNVLCPGCSGVLDSHPSLKALRHDEYTCALCAKAYEASVDDQVEAAF HHHHHHHCEEECCCCEECCCCCCHHCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCEEE TVSPGIRRIGAHDPDSLPLWDYTRQMFWSSGIELDEDVLARLSDQDTLGAAALQPGETAE EECCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHCCCCCCCE LSIALPSEFIIVFEPVTHSAQFIDVAGEPTDEVQSLALSFERQHPLTPTLSLRPGPLKLS EEEECCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEECCCCCEEEE LTNHADKRVIPAVWVAADALHTLLGKRKPILTAKRMLTNQTFRDVFKADNLSPDQRLKIT ECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE SLTFLFTDLKGSTALYQRVGDLKAFDLVRAHFRALLEIIAAEKGAVVKTIGDAVMATFNR EEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC PEDALAAALRMREAMDALNEERGTRDLVVKIGIHEGPCLAVMLNERQDYFGQTVNIAARV CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCHHHHCHHHHHHHHH LGLATTQAIHLTGAVIDTPAVTAMLDREAIAPIEKHAALRGIADKVLVYEIP HHHHHHHEEEEECCEECCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA