Click here to switch to the map view.

The map label for this gene is 86747221

Identifier: 86747221

GI number: 86747221

Start: 101152

End: 101751

Strand: Reverse

Name: 86747221

Synonym: RPB_0094

Alternate gene names: NA

Gene position: 101751-101152 (Counterclockwise)

Preceding gene: 86747223

Following gene: 86747220

Centisome position: 1.91

GC content: 67.17

Gene sequence:

>600_bases
ATGACGGACGTGTGCATGAGTGCGAGGCGAATTCTGATTGCCGCGATGGCGGGAGCGATGCTGTGGAGCGCCGGCAGCGC
CGCACAGGCGCGTCCGGCGTCGAAGGGCGCGACCGCCAAGCCGGAGCCGGCCGCCGCGGCGTCCAACAGCGCCGAGCCGA
CTTTGATCGGCCAGTTCGGCAGTTGGGGCGCCTATATGGCGACCCCGAACGGCAAGCGGGTCTGCTTCGTCCTCGCCAAA
CCGTCGTCGTCCAAGACCACCCCGCCGAACCGGCCGCGCGATCCGGCCTATGCCTTCATCTCGACCCGGCCGGCCGAAAA
GGTGATCAACGAGGTTTCGGTGATGATCGGTTATCCGCTGAAACCCGGCTCGGAATCGACCATGGAGATCGGCGGAGCGT
CGTTCGCGATGTACACCCAGGGCGACGGCCTCTGGATCAAGAACGCCGCCGAGGAAGACCGTCTGGTCGAGGCGCTGCGC
AAGGGGCCGGAGGTCACCGTCAAGGGCGTTTCCGCCAAGGGAACCGCGACCACCGACACGTTTTCGTTGAAGGGCCTGGC
GCAGGCGCTCGACAAGGTGGCGCAGAGCTGCGGCGGCTGA

Upstream 100 bases:

>100_bases
CGCTTTGCCGAATCGACCATCCCGGCTATTCCGGGTCTGGTGATCAGGCGGATCCCGCAAGCCATGTTGCAGTCACAATG
ATGAGGGACCAGACTTGCCC

Downstream 100 bases:

>100_bases
GGCCCGACTGCCGCGTTTAGCGGCTTTGCAGAACGGCCGAAAAAGCCTATCTGAAATCTGGTTTTCGGGCCCGGGCGATC
TCGCTGGTCCCTCATGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MTDVCMSARRILIAAMAGAMLWSAGSAAQARPASKGATAKPEPAAAASNSAEPTLIGQFGSWGAYMATPNGKRVCFVLAK
PSSSKTTPPNRPRDPAYAFISTRPAEKVINEVSVMIGYPLKPGSESTMEIGGASFAMYTQGDGLWIKNAAEEDRLVEALR
KGPEVTVKGVSAKGTATTDTFSLKGLAQALDKVAQSCGG

Sequences:

>Translated_199_residues
MTDVCMSARRILIAAMAGAMLWSAGSAAQARPASKGATAKPEPAAAASNSAEPTLIGQFGSWGAYMATPNGKRVCFVLAK
PSSSKTTPPNRPRDPAYAFISTRPAEKVINEVSVMIGYPLKPGSESTMEIGGASFAMYTQGDGLWIKNAAEEDRLVEALR
KGPEVTVKGVSAKGTATTDTFSLKGLAQALDKVAQSCGG
>Mature_198_residues
TDVCMSARRILIAAMAGAMLWSAGSAAQARPASKGATAKPEPAAAASNSAEPTLIGQFGSWGAYMATPNGKRVCFVLAKP
SSSKTTPPNRPRDPAYAFISTRPAEKVINEVSVMIGYPLKPGSESTMEIGGASFAMYTQGDGLWIKNAAEEDRLVEALRK
GPEVTVKGVSAKGTATTDTFSLKGLAQALDKVAQSCGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20602; Mature: 20471

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVCMSARRILIAAMAGAMLWSAGSAAQARPASKGATAKPEPAAAASNSAEPTLIGQFG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
SWGAYMATPNGKRVCFVLAKPSSSKTTPPNRPRDPAYAFISTRPAEKVINEVSVMIGYPL
CCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHEEECCC
KPGSESTMEIGGASFAMYTQGDGLWIKNAAEEDRLVEALRKGPEVTVKGVSAKGTATTDT
CCCCCCEEEECCCEEEEEECCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCH
FSLKGLAQALDKVAQSCGG
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDVCMSARRILIAAMAGAMLWSAGSAAQARPASKGATAKPEPAAAASNSAEPTLIGQFG
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
SWGAYMATPNGKRVCFVLAKPSSSKTTPPNRPRDPAYAFISTRPAEKVINEVSVMIGYPL
CCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHEEECCC
KPGSESTMEIGGASFAMYTQGDGLWIKNAAEEDRLVEALRKGPEVTVKGVSAKGTATTDT
CCCCCCEEEECCCEEEEEECCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCH
FSLKGLAQALDKVAQSCGG
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA