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The map label for this gene is 86747181

Identifier: 86747181

GI number: 86747181

Start: 56021

End: 56614

Strand: Reverse

Name: 86747181

Synonym: RPB_0054

Alternate gene names: NA

Gene position: 56614-56021 (Counterclockwise)

Preceding gene: 86747182

Following gene: 86747180

Centisome position: 1.06

GC content: 68.69

Gene sequence:

>594_bases
ATGATGATTGAGACGCCATCGACGACGAAAGCGATGCTGATGTCGCTCGGCCTCGCCACCCTCGCCGCGACGCCGGCGTC
GGCGGCGCCGCCGCTGCAGTGTCAAGATTTCGTCAACTACGCGATGAAGGCCCAGGCGCAATACTATGCGCGCGGCTGCC
CACGCATCCCGTCGATGCACGCCAACCGCGAAGGGCATTTCCAGTGGTGCCTGAAGCGCAACGAAGGCCAGGTCGCCGCC
GAACAGCGTGCCAAGGCGGCCACGCTGAATTCGTGCCTGGCAGGAGCCGCGTCCCCGCCGCGCCCGCAATCCGCCCAGAT
GCAATCCACCGCGACCCGCGAGCCGGTGTGCTCGAGCTACGGCCAGGCCGGCGAGAAGTGGCGCAACCGCGCAACCGCAC
AGGGCTGCAACGTCGCGGCGATCCCGGTGCCGCGCGGCTGGGCCAGCTACGCCTGGGGCGCCAATCAACTGTTCAGCTAC
TGCATGGGCACAAGCGACGCTGGCTTCCGTGGCCGCAGCGCGCAGGCGCTCGGCCACAAGGTGCAGCTCGAGAAGGCCTG
CTCGCAGCAGCTGCGCCGACCGGTCCGGCTGTAA

Upstream 100 bases:

>100_bases
TTTCGCTGATCTGCAATTGACCGCGTCGGCCGGCTCGATGCCCGCGCCGGCCGCTCGCTGATCCTCTACCCAGAAAGAAC
TCACCCGCTCAGGATGTTGC

Downstream 100 bases:

>100_bases
CCGTCACCCCATCACTCCATCACCTAATCACCCCATCACTCCGTCGCATCAACGAGGTAGTGCCATGATCCATCGTCATC
TCCTGCTCGGCCTGCTGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MMIETPSTTKAMLMSLGLATLAATPASAAPPLQCQDFVNYAMKAQAQYYARGCPRIPSMHANREGHFQWCLKRNEGQVAA
EQRAKAATLNSCLAGAASPPRPQSAQMQSTATREPVCSSYGQAGEKWRNRATAQGCNVAAIPVPRGWASYAWGANQLFSY
CMGTSDAGFRGRSAQALGHKVQLEKACSQQLRRPVRL

Sequences:

>Translated_197_residues
MMIETPSTTKAMLMSLGLATLAATPASAAPPLQCQDFVNYAMKAQAQYYARGCPRIPSMHANREGHFQWCLKRNEGQVAA
EQRAKAATLNSCLAGAASPPRPQSAQMQSTATREPVCSSYGQAGEKWRNRATAQGCNVAAIPVPRGWASYAWGANQLFSY
CMGTSDAGFRGRSAQALGHKVQLEKACSQQLRRPVRL
>Mature_197_residues
MMIETPSTTKAMLMSLGLATLAATPASAAPPLQCQDFVNYAMKAQAQYYARGCPRIPSMHANREGHFQWCLKRNEGQVAA
EQRAKAATLNSCLAGAASPPRPQSAQMQSTATREPVCSSYGQAGEKWRNRATAQGCNVAAIPVPRGWASYAWGANQLFSY
CMGTSDAGFRGRSAQALGHKVQLEKACSQQLRRPVRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21267; Mature: 21267

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIETPSTTKAMLMSLGLATLAATPASAAPPLQCQDFVNYAMKAQAQYYARGCPRIPSMH
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
ANREGHFQWCLKRNEGQVAAEQRAKAATLNSCLAGAASPPRPQSAQMQSTATREPVCSSY
CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHH
GQAGEKWRNRATAQGCNVAAIPVPRGWASYAWGANQLFSYCMGTSDAGFRGRSAQALGHK
HHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHH
VQLEKACSQQLRRPVRL
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMIETPSTTKAMLMSLGLATLAATPASAAPPLQCQDFVNYAMKAQAQYYARGCPRIPSMH
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
ANREGHFQWCLKRNEGQVAAEQRAKAATLNSCLAGAASPPRPQSAQMQSTATREPVCSSY
CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHH
GQAGEKWRNRATAQGCNVAAIPVPRGWASYAWGANQLFSYCMGTSDAGFRGRSAQALGHK
HHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHH
VQLEKACSQQLRRPVRL
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA